RNA–Protein interactions for RNA: ENST00000426726.7

RUNDC3A-202, Transcript of RUN domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RUNDC3A, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-202ENST00000426726 NISCHQ9Y2I1 1504 aa51.99■■■■■ 5.91
RUNDC3A-202ENST00000426726 CCDC180Q9P1Z9 1646 aa45.45■■■■■ 4.87
RUNDC3A-202ENST00000426726 ZCCHC6Q5VYS8 1495 aaKnown RBP43.71■■■■■ 4.59
RUNDC3A-202ENST00000426726 DCAF1Q9Y4B6 1507 aa43.07■■■■■ 4.49
RUNDC3A-202ENST00000426726 ABCC9O60706 1549 aa42.79■■■■■ 4.44
RUNDC3A-202ENST00000426726 DCAF8L2P0C7V8 631 aa42.74■■■■■ 4.43
RUNDC3A-202ENST00000426726 MYO15BQ96JP2 1530 aa42.58■■■■■ 4.41
RUNDC3A-202ENST00000426726 NACADO15069 1562 aa42.27■■■■■ 4.36
RUNDC3A-202ENST00000426726 SHROOM4Q9ULL8 1493 aa42.27■■■■■ 4.36
RUNDC3A-202ENST00000426726 RB1CC1Q8TDY2 1594 aa41.91■■■■■ 4.3
RUNDC3A-202ENST00000426726 SCRIBQ14160 1630 aa41.68■■■■■ 4.26
RUNDC3A-202ENST00000426726 UNC13AQ9UPW8 1703 aa41.06■■■■■ 4.16
RUNDC3A-202ENST00000426726 SUPT5HO00267 1087 aaKnown RBP40.66■■■■■ 4.1
RUNDC3A-202ENST00000426726 BICRAQ9NZM4 1560 aa40.6■■■■■ 4.09
RUNDC3A-202ENST00000426726 CECR2Q9BXF3 1484 aa40.32■■■■■ 4.05
RUNDC3A-202ENST00000426726 RSF1Q96T23 1441 aaPredicted RBP40.3■■■■■ 4.04
RUNDC3A-202ENST00000426726 PABPN1Q86U42 306 aaKnown RBP eCLIP40.26■■■■■ 4.04
RUNDC3A-202ENST00000426726 BAZ1AQ9NRL2 1556 aaPredicted RBP40.19■■■■■ 4.02
RUNDC3A-202ENST00000426726 MROH2BQ7Z745 1585 aa40.13■■■■■ 4.02
RUNDC3A-202ENST00000426726 SMARCA4P51532 1647 aa40■■■■□ 3.99
RUNDC3A-202ENST00000426726 WIZO95785 1651 aa39.82■■■■□ 3.97
RUNDC3A-202ENST00000426726 PEG3Q9GZU2 1588 aa39.55■■■■□ 3.92
RUNDC3A-202ENST00000426726 TOP2AP11388 1531 aaKnown RBP39.47■■■■□ 3.91
RUNDC3A-202ENST00000426726 EIF4G1Q04637 1599 aaKnown RBP39.38■■■■□ 3.9
RUNDC3A-202ENST00000426726 SMARCA2P51531 1590 aa39.34■■■■□ 3.89
RUNDC3A-202ENST00000426726 ATAD2BQ9ULI0 1458 aa39.29■■■■□ 3.88
RUNDC3A-202ENST00000426726 BAZ1BQ9UIG0 1483 aaKnown RBP39.09■■■■□ 3.85
RUNDC3A-202ENST00000426726 HMGXB3Q12766 1538 aa38.99■■■■□ 3.83
RUNDC3A-202ENST00000426726 CCDC88BA6NC98 1476 aa38.99■■■■□ 3.83
RUNDC3A-202ENST00000426726 NCAPD3P42695 1498 aa38.97■■■■□ 3.83
RUNDC3A-202ENST00000426726 CHIC1Q5VXU3 224 aa38.97■■■■□ 3.83
RUNDC3A-202ENST00000426726 CC2D2AQ9P2K1 1620 aa38.79■■■■□ 3.8
RUNDC3A-202ENST00000426726 TRIM41Q8WV44 630 aa38.28■■■■□ 3.72
RUNDC3A-202ENST00000426726 ABCC8Q09428 1581 aa38.17■■■■□ 3.7
RUNDC3A-202ENST00000426726 CFTRP13569 1480 aa38.11■■■■□ 3.69
RUNDC3A-202ENST00000426726 PRDM2Q13029 1718 aa38.04■■■■□ 3.68
RUNDC3A-202ENST00000426726 WRNQ14191 1432 aaPredicted RBP eCLIP37.95■■■■□ 3.67
RUNDC3A-202ENST00000426726 CADPSQ9ULU8 1353 aa37.94■■■■□ 3.66
RUNDC3A-202ENST00000426726 SYNJ1O43426 1573 aa37.81■■■■□ 3.64
RUNDC3A-202ENST00000426726 TOP2BQ02880 1626 aa37.7■■■■□ 3.63
RUNDC3A-202ENST00000426726 LAMC3Q9Y6N6 1575 aa37.7■■■■□ 3.63
RUNDC3A-202ENST00000426726 BIVM-ERCC5R4GMW8 1640 aa37.68■■■■□ 3.62
RUNDC3A-202ENST00000426726 DNAJC5BQ9UF47 199 aa37.6■■■■□ 3.61
RUNDC3A-202ENST00000426726 NESP48681 1621 aa37.56■■■■□ 3.6
RUNDC3A-202ENST00000426726 CUX1P39880 1505 aa37.54■■■■□ 3.6
RUNDC3A-202ENST00000426726 FANCD2Q9BXW9 1451 aa37.54■■■■□ 3.6
RUNDC3A-202ENST00000426726 FAM9AQ8IZU1 332 aaPredicted RBP37.5■■■■□ 3.59
RUNDC3A-202ENST00000426726 EEA1Q15075 1411 aa37.49■■■■□ 3.59
RUNDC3A-202ENST00000426726 SOGA1O94964 1423 aa37.42■■■■□ 3.58
RUNDC3A-202ENST00000426726 LOC105371045A0A1W2PR82 267 aa37.39■■■■□ 3.58
RUNDC3A-202ENST00000426726 PDS5BQ9NTI5 1447 aa37.35■■■■□ 3.57
RUNDC3A-202ENST00000426726 CEP164Q9UPV0 1460 aa37.33■■■■□ 3.57
RUNDC3A-202ENST00000426726 DNMBPQ6XZF7 1577 aa37.26■■■■□ 3.56
RUNDC3A-202ENST00000426726 RUSC2Q8N2Y8 1516 aa37.25■■■■□ 3.55
RUNDC3A-202ENST00000426726 KIF21AQ7Z4S6 1674 aa37.21■■■■□ 3.55
RUNDC3A-202ENST00000426726 TOPBP1Q92547 1522 aa37.15■■■■□ 3.54
RUNDC3A-202ENST00000426726 CSRNP3Q8WYN3 585 aa37.14■■■■□ 3.54
RUNDC3A-202ENST00000426726 FGD5Q6ZNL6 1462 aa37.13■■■■□ 3.54
RUNDC3A-202ENST00000426726 URB2Q14146 1524 aaKnown RBP37.06■■■■□ 3.52
RUNDC3A-202ENST00000426726 KIF27Q86VH2 1401 aa37.01■■■■□ 3.51
RUNDC3A-202ENST00000426726 KIF21BO75037 1637 aa37■■■■□ 3.51
RUNDC3A-202ENST00000426726 POLA1P09884 1462 aaPredicted RBP36.96■■■■□ 3.51
RUNDC3A-202ENST00000426726 GOLGA3Q08378 1498 aa36.93■■■■□ 3.5
RUNDC3A-202ENST00000426726 EHMT2Q96KQ7 1210 aa36.91■■■■□ 3.5
RUNDC3A-202ENST00000426726 MRC2Q9UBG0 1479 aa36.89■■■■□ 3.5
RUNDC3A-202ENST00000426726 CUX2O14529 1486 aa36.88■■■■□ 3.5
RUNDC3A-202ENST00000426726 ABCA10Q8WWZ4 1543 aa36.84■■■■□ 3.49
RUNDC3A-202ENST00000426726 TNIKQ9UKE5 1360 aa36.78■■■■□ 3.48
RUNDC3A-202ENST00000426726 RAD54L2Q9Y4B4 1467 aa36.78■■■■□ 3.48
RUNDC3A-202ENST00000426726 WDR97A6NE52 1622 aa36.77■■■■□ 3.48
RUNDC3A-202ENST00000426726 ERICH3Q5RHP9 1530 aa36.76■■■■□ 3.48
RUNDC3A-202ENST00000426726 PRXQ9BXM0 1461 aa36.76■■■■□ 3.48
RUNDC3A-202ENST00000426726 ERCC6Q03468 1493 aa36.73■■■■□ 3.47
RUNDC3A-202ENST00000426726 WDR62O43379 1518 aa36.72■■■■□ 3.47
RUNDC3A-202ENST00000426726 RAPGEF2Q9Y4G8 1499 aa36.69■■■■□ 3.46
RUNDC3A-202ENST00000426726 UBTFP17480 764 aaKnown RBP36.64■■■■□ 3.46
RUNDC3A-202ENST00000426726 IGF1RP08069 1367 aa36.61■■■■□ 3.45
RUNDC3A-202ENST00000426726 TARBP1Q13395 1621 aaKnown RBP36.61■■■■□ 3.45
RUNDC3A-202ENST00000426726 THOC2Q8NI27 1593 aaKnown RBP36.61■■■■□ 3.45
RUNDC3A-202ENST00000426726 CEP162Q5TB80 1403 aa36.58■■■■□ 3.45
RUNDC3A-202ENST00000426726 ABCA5Q8WWZ7 1642 aa36.57■■■■□ 3.45
RUNDC3A-202ENST00000426726 CUL7Q14999 1698 aa36.48■■■■□ 3.43
RUNDC3A-202ENST00000426726 CARMIL1Q5VZK9 1371 aa36.45■■■■□ 3.43
RUNDC3A-202ENST00000426726 IFT140Q96RY7 1462 aa36.44■■■■□ 3.42
RUNDC3A-202ENST00000426726 GAPVD1Q14C86 1478 aa36.43■■■■□ 3.42
RUNDC3A-202ENST00000426726 TDRD9Q8NDG6 1382 aaKnown RBP36.4■■■■□ 3.42
RUNDC3A-202ENST00000426726 PBRM1Q86U86 1689 aa36.3■■■■□ 3.4
RUNDC3A-202ENST00000426726 CLIP1P30622 1438 aa36.3■■■■□ 3.4
RUNDC3A-202ENST00000426726 AQRO60306 1485 aaKnown RBP eCLIP36.18■■■■□ 3.38
RUNDC3A-202ENST00000426726 GRIN2BQ13224 1484 aa36.17■■■■□ 3.38
RUNDC3A-202ENST00000426726 ZNF608Q9ULD9 1512 aaPredicted RBP36.16■■■■□ 3.38
RUNDC3A-202ENST00000426726 EIF4G3O43432 1585 aaKnown RBP36.14■■■■□ 3.38
RUNDC3A-202ENST00000426726 ADAMTS12P58397 1594 aa36.09■■■■□ 3.37
RUNDC3A-202ENST00000426726 CTTNBP2Q8WZ74 1663 aa36.07■■■■□ 3.37
RUNDC3A-202ENST00000426726 FHAD1B1AJZ9 1412 aa36.05■■■■□ 3.36
RUNDC3A-202ENST00000426726 VPS8Q8N3P4 1428 aa36.01■■■■□ 3.36
RUNDC3A-202ENST00000426726 RANGAP1P46060 587 aaPredicted RBP35.96■■■■□ 3.35
RUNDC3A-202ENST00000426726 ARAP1Q96P48 1450 aa35.95■■■■□ 3.35
RUNDC3A-202ENST00000426726 ARHGAP35Q9NRY4 1499 aa35.94■■■■□ 3.34
RUNDC3A-202ENST00000426726 SNAPC4Q5SXM2 1469 aa35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms