RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 NISCHQ9Y2I1 1504 aa45.43■■■■■ 4.86
PAXBP1-201ENST00000290178 SHROOM4Q9ULL8 1493 aa38.79■■■■□ 3.8
PAXBP1-201ENST00000290178 CCDC180Q9P1Z9 1646 aa38.58■■■■□ 3.77
PAXBP1-201ENST00000290178 ZCCHC6Q5VYS8 1495 aaKnown RBP38.37■■■■□ 3.73
PAXBP1-201ENST00000290178 SUPT5HO00267 1087 aaKnown RBP37.97■■■■□ 3.67
PAXBP1-201ENST00000290178 DCAF8L2P0C7V8 631 aa37.9■■■■□ 3.66
PAXBP1-201ENST00000290178 DCAF1Q9Y4B6 1507 aa37.17■■■■□ 3.54
PAXBP1-201ENST00000290178 CHIC1Q5VXU3 224 aa36.79■■■■□ 3.48
PAXBP1-201ENST00000290178 MYO15BQ96JP2 1530 aa36.62■■■■□ 3.45
PAXBP1-201ENST00000290178 SCRIBQ14160 1630 aa36.29■■■■□ 3.4
PAXBP1-201ENST00000290178 ABCC9O60706 1549 aa36.16■■■■□ 3.38
PAXBP1-201ENST00000290178 RSF1Q96T23 1441 aaPredicted RBP35.93■■■■□ 3.34
PAXBP1-201ENST00000290178 LOC105371045A0A1W2PR82 267 aa35.78■■■■□ 3.32
PAXBP1-201ENST00000290178 NACADO15069 1562 aa35.75■■■■□ 3.31
PAXBP1-201ENST00000290178 PCGF6Q9BYE7 350 aa35.54■■■■□ 3.28
PAXBP1-201ENST00000290178 CECR2Q9BXF3 1484 aa35.53■■■■□ 3.28
PAXBP1-201ENST00000290178 RB1CC1Q8TDY2 1594 aa35.53■■■■□ 3.28
PAXBP1-201ENST00000290178 MROH2BQ7Z745 1585 aa35.36■■■■□ 3.25
PAXBP1-201ENST00000290178 HRCP23327 699 aa35.35■■■■□ 3.25
PAXBP1-201ENST00000290178 TRIM41Q8WV44 630 aa35.32■■■■□ 3.24
PAXBP1-201ENST00000290178 WIZO95785 1651 aa35.16■■■■□ 3.22
PAXBP1-201ENST00000290178 FAM9AQ8IZU1 332 aaPredicted RBP35.12■■■■□ 3.21
PAXBP1-201ENST00000290178 EHMT2Q96KQ7 1210 aa34.9■■■■□ 3.18
PAXBP1-201ENST00000290178 BAZ1AQ9NRL2 1556 aaPredicted RBP34.86■■■■□ 3.17
PAXBP1-201ENST00000290178 TRIM26Q12899 539 aaPredicted RBP34.81■■■■□ 3.16
PAXBP1-201ENST00000290178 PPARGC1BQ86YN6 1023 aaKnown RBP34.78■■■■□ 3.16
PAXBP1-201ENST00000290178 UNC13AQ9UPW8 1703 aa34.72■■■■□ 3.15
PAXBP1-201ENST00000290178 SMARCA4P51532 1647 aa34.62■■■■□ 3.13
PAXBP1-201ENST00000290178 EIF4G1Q04637 1599 aaKnown RBP34.55■■■■□ 3.12
PAXBP1-201ENST00000290178 PABPN1Q86U42 306 aaKnown RBP eCLIP34.54■■■■□ 3.12
PAXBP1-201ENST00000290178 TOP2AP11388 1531 aaKnown RBP34.53■■■■□ 3.12
PAXBP1-201ENST00000290178 CCDC88BA6NC98 1476 aa34.46■■■■□ 3.11
PAXBP1-201ENST00000290178 SMARCA2P51531 1590 aa34.38■■■■□ 3.09
PAXBP1-201ENST00000290178 ABCC8Q09428 1581 aa34.36■■■■□ 3.09
PAXBP1-201ENST00000290178 BICRAQ9NZM4 1560 aa34.32■■■■□ 3.09
PAXBP1-201ENST00000290178 SOGA1O94964 1423 aa34.02■■■■□ 3.04
PAXBP1-201ENST00000290178 PEG3Q9GZU2 1588 aa33.9■■■■□ 3.02
PAXBP1-201ENST00000290178 ZEB1P37275 1124 aaPredicted RBP33.89■■■■□ 3.02
PAXBP1-201ENST00000290178 RUSC2Q8N2Y8 1516 aa33.89■■■■□ 3.02
PAXBP1-201ENST00000290178 ATAD2BQ9ULI0 1458 aa33.79■■■■□ 3
PAXBP1-201ENST00000290178 CSRNP3Q8WYN3 585 aa33.79■■■■□ 3
PAXBP1-201ENST00000290178 WRNQ14191 1432 aaPredicted RBP eCLIP33.74■■■□□ 2.99
PAXBP1-201ENST00000290178 CEP162Q5TB80 1403 aa33.74■■■□□ 2.99
PAXBP1-201ENST00000290178 TTBK1Q5TCY1 1321 aaPredicted RBP33.7■■■□□ 2.99
PAXBP1-201ENST00000290178 UBTFP17480 764 aaKnown RBP33.68■■■□□ 2.98
PAXBP1-201ENST00000290178 BAZ1BQ9UIG0 1483 aaKnown RBP33.68■■■□□ 2.98
PAXBP1-201ENST00000290178 TNIKQ9UKE5 1360 aa33.67■■■□□ 2.98
PAXBP1-201ENST00000290178 EEA1Q15075 1411 aa33.66■■■□□ 2.98
PAXBP1-201ENST00000290178 SYNJ1O43426 1573 aa33.6■■■□□ 2.97
PAXBP1-201ENST00000290178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.56■■■□□ 2.96
PAXBP1-201ENST00000290178 GOLGA3Q08378 1498 aa33.49■■■□□ 2.95
PAXBP1-201ENST00000290178 CCER1Q8TC90 406 aaPredicted RBP33.4■■■□□ 2.94
PAXBP1-201ENST00000290178 CEP164Q9UPV0 1460 aa33.31■■■□□ 2.92
PAXBP1-201ENST00000290178 KIF21BO75037 1637 aa33.23■■■□□ 2.91
PAXBP1-201ENST00000290178 RAPGEF2Q9Y4G8 1499 aa33.17■■■□□ 2.9
PAXBP1-201ENST00000290178 RANGAP1P46060 587 aaPredicted RBP33.16■■■□□ 2.9
PAXBP1-201ENST00000290178 TOP2BQ02880 1626 aa33.14■■■□□ 2.9
PAXBP1-201ENST00000290178 CLIP1P30622 1438 aa33.14■■■□□ 2.9
PAXBP1-201ENST00000290178 NCAPD3P42695 1498 aa33.13■■■□□ 2.89
PAXBP1-201ENST00000290178 HMGXB3Q12766 1538 aa33.06■■■□□ 2.88
PAXBP1-201ENST00000290178 BIVM-ERCC5R4GMW8 1640 aa33■■■□□ 2.87
PAXBP1-201ENST00000290178 VPS8Q8N3P4 1428 aa32.95■■■□□ 2.87
PAXBP1-201ENST00000290178 CUX1P39880 1505 aa32.91■■■□□ 2.86
PAXBP1-201ENST00000290178 HNRNPUL2Q1KMD3 747 aaKnown RBP32.88■■■□□ 2.85
PAXBP1-201ENST00000290178 APLP2Q06481 763 aa32.84■■■□□ 2.85
PAXBP1-201ENST00000290178 CFTRP13569 1480 aa32.84■■■□□ 2.85
PAXBP1-201ENST00000290178 PRXQ9BXM0 1461 aa32.81■■■□□ 2.84
PAXBP1-201ENST00000290178 ERICH3Q5RHP9 1530 aa32.72■■■□□ 2.83
PAXBP1-201ENST00000290178 KIF27Q86VH2 1401 aa32.7■■■□□ 2.82
PAXBP1-201ENST00000290178 DIEXFQ68CQ4 756 aaKnown RBP32.64■■■□□ 2.82
PAXBP1-201ENST00000290178 ARAP1Q96P48 1450 aa32.63■■■□□ 2.81
PAXBP1-201ENST00000290178 KANK4Q5T7N3 995 aaPredicted RBP32.54■■■□□ 2.8
PAXBP1-201ENST00000290178 CADPSQ9ULU8 1353 aa32.53■■■□□ 2.8
PAXBP1-201ENST00000290178 SCAF1Q9H7N4 1312 aaKnown RBP32.51■■■□□ 2.8
PAXBP1-201ENST00000290178 CUX2O14529 1486 aa32.46■■■□□ 2.79
PAXBP1-201ENST00000290178 PRDM2Q13029 1718 aa32.45■■■□□ 2.79
PAXBP1-201ENST00000290178 ZNF316A6NFI3 1004 aaPredicted RBP32.43■■■□□ 2.78
PAXBP1-201ENST00000290178 IGF1RP08069 1367 aa32.41■■■□□ 2.78
PAXBP1-201ENST00000290178 CC2D2AQ9P2K1 1620 aa32.41■■■□□ 2.78
PAXBP1-201ENST00000290178 ARHGAP35Q9NRY4 1499 aa32.38■■■□□ 2.77
PAXBP1-201ENST00000290178 FGD5Q6ZNL6 1462 aa32.35■■■□□ 2.77
PAXBP1-201ENST00000290178 NEUROD1Q13562 356 aa32.27■■■□□ 2.76
PAXBP1-201ENST00000290178 CARMIL1Q5VZK9 1371 aa32.26■■■□□ 2.75
PAXBP1-201ENST00000290178 ACIN1Q9UKV3 1341 aaKnown RBP32.23■■■□□ 2.75
PAXBP1-201ENST00000290178 FANCD2Q9BXW9 1451 aa32.22■■■□□ 2.75
PAXBP1-201ENST00000290178 RRBP1Q9P2E9 1410 aaKnown RBP32.15■■■□□ 2.74
PAXBP1-201ENST00000290178 DHX57Q6P158 1386 aaKnown RBP32.13■■■□□ 2.73
PAXBP1-201ENST00000290178 NESP48681 1621 aa32.11■■■□□ 2.73
PAXBP1-201ENST00000290178 ITGAEP38570 1179 aa32.11■■■□□ 2.73
PAXBP1-201ENST00000290178 RAD54L2Q9Y4B4 1467 aa32.1■■■□□ 2.73
PAXBP1-201ENST00000290178 P3H3Q8IVL6 736 aa32.07■■■□□ 2.72
PAXBP1-201ENST00000290178 CCNB3Q8WWL7 1395 aa32.07■■■□□ 2.72
PAXBP1-201ENST00000290178 CENPBP07199 599 aaPredicted RBP32.02■■■□□ 2.72
PAXBP1-201ENST00000290178 MIER1Q8N108 512 aa32.01■■■□□ 2.71
PAXBP1-201ENST00000290178 DNMBPQ6XZF7 1577 aa31.99■■■□□ 2.71
PAXBP1-201ENST00000290178 TOPBP1Q92547 1522 aa31.98■■■□□ 2.71
PAXBP1-201ENST00000290178 POLA1P09884 1462 aaPredicted RBP31.98■■■□□ 2.71
PAXBP1-201ENST00000290178 CLSPNQ9HAW4 1339 aa31.96■■■□□ 2.71
PAXBP1-201ENST00000290178 TIAM1Q13009 1591 aa31.95■■■□□ 2.71
PAXBP1-201ENST00000290178 YTHDC1Q96MU7 727 aaKnown RBP31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms