Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 M6PR-213ENST00000544245 660 ntTSL 217.64■□□□□ 0.413e-6■□□□□ 9.2
EIF3DO15371 RAI1-204ENST00000489697 1570 ntTSL 317.48■□□□□ 0.393e-6■□□□□ 9.2
EIF3DO15371 CDC42BPB-204ENST00000559043 1999 ntTSL 517.24■□□□□ 0.353e-6■□□□□ 9.2
EIF3DO15371 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.06■□□□□ 0.323e-6■□□□□ 9.2
EIF3DO15371 DLGAP4-AS1-201ENST00000425233 443 ntTSL 516.96■□□□□ 0.313e-6■□□□□ 9.2
EIF3DO15371 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.64■□□□□ 0.253e-6■□□□□ 9.2
EIF3DO15371 NOP2-213ENST00000542015 1002 ntTSL 316.52■□□□□ 0.243e-6■□□□□ 9.2
EIF3DO15371 NOP2-221ENST00000546053 508 ntTSL 316.51■□□□□ 0.233e-6■□□□□ 9.2
EIF3DO15371 NOP2-205ENST00000536124 689 ntTSL 516.15■□□□□ 0.183e-6■□□□□ 9.2
EIF3DO15371 CDC42BPB-209ENST00000634889 507 ntTSL 316.13■□□□□ 0.173e-6■□□□□ 9.2
EIF3DO15371 HSPG2-214ENST00000635682 921 ntTSL 516.08■□□□□ 0.163e-6■□□□□ 9.2
EIF3DO15371 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.06■□□□□ 0.163e-6■□□□□ 9.2
EIF3DO15371 M6PR-206ENST00000541507 2198 ntTSL 515.29■□□□□ 0.043e-6■□□□□ 9.2
EIF3DO15371 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.29■□□□□ 0.043e-6■□□□□ 9.2
EIF3DO15371 NXN-209ENST00000575455 914 ntTSL 1 (best)15.25■□□□□ 0.033e-6■□□□□ 9.2
EIF3DO15371 NOP2-209ENST00000538420 572 ntTSL 414.45□□□□□ -0.13e-6■□□□□ 9.2
EIF3DO15371 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC14.41□□□□□ -0.13e-6■□□□□ 9.2
EIF3DO15371 STMN3-204ENST00000632676 519 ntTSL 414.29□□□□□ -0.123e-6■□□□□ 9.2
EIF3DO15371 RAI1-203ENST00000471135 570 ntTSL 314.16□□□□□ -0.143e-6■□□□□ 9.2
EIF3DO15371 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.183e-6■□□□□ 9.2
EIF3DO15371 NXN-212ENST00000577098 659 ntTSL 313.87□□□□□ -0.193e-6■□□□□ 9.2
EIF3DO15371 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.233e-6■□□□□ 9.2
EIF3DO15371 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC13.51□□□□□ -0.253e-6■□□□□ 9.2
EIF3DO15371 M6PR-209ENST00000543704 616 ntTSL 313.51□□□□□ -0.253e-6■□□□□ 9.2
EIF3DO15371 NOP2-201ENST00000322166 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.273e-6■□□□□ 9.2
EIF3DO15371 NOP2-203ENST00000399466 2701 ntTSL 1 (best) BASIC13.18□□□□□ -0.33e-6■□□□□ 9.2
EIF3DO15371 SYPL1-201ENST00000011473 2127 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.33e-6■□□□□ 9.2
EIF3DO15371 M6PR-201ENST00000000412 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.313e-6■□□□□ 9.2
EIF3DO15371 CDCA8-201ENST00000327331 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.383e-6■□□□□ 9.2
EIF3DO15371 M6PR-205ENST00000540837 648 ntTSL 212.58□□□□□ -0.43e-6■□□□□ 9.2
EIF3DO15371 NOP2-223ENST00000620535 2791 ntTSL 1 (best) BASIC12.51□□□□□ -0.413e-6■□□□□ 9.2
EIF3DO15371 SYPL1-202ENST00000455385 2151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.523e-6■□□□□ 9.2
EIF3DO15371 M6PR-207ENST00000543159 720 ntTSL 210.91□□□□□ -0.663e-6■□□□□ 9.2
EIF3DO15371 NOP2-207ENST00000537442 2613 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.73e-6■□□□□ 9.2
EIF3DO15371 USP34-218ENST00000490552 1793 ntTSL 210.46□□□□□ -0.743e-6■□□□□ 9.2
EIF3DO15371 CDCA8-202ENST00000373055 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.753e-6■□□□□ 9.2
EIF3DO15371 NOP2-218ENST00000545200 2751 ntTSL 1 (best) BASIC10.37□□□□□ -0.753e-6■□□□□ 9.2
EIF3DO15371 NOP2-202ENST00000382421 2736 ntTSL 1 (best) BASIC10.13□□□□□ -0.793e-6■□□□□ 9.2
EIF3DO15371 STMN3-205ENST00000634126 605 ntTSL 39.99□□□□□ -0.813e-6■□□□□ 9.2
EIF3DO15371 NXN-205ENST00000571338 586 ntTSL 48.69□□□□□ -1.023e-6■□□□□ 9.2
EIF3DO15371 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.29□□□□□ -1.243e-6■□□□□ 9.2
EIF3DO15371 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.49□□□□□ -1.373e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.12□□□□□ -1.433e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.533e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-218ENST00000487294 587 ntTSL 35.34□□□□□ -1.553e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.34□□□□□ -1.563e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.573e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-206ENST00000429703 3443 ntTSL 54.08□□□□□ -1.763e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.92□□□□□ -1.783e-6■□□□□ 9.2
EIF3DO15371 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.783e-6■□□□□ 9.2
EIF3DO15371 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.85□□□□□ -1.793e-6■□□□□ 9.2
EIF3DO15371 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.52□□□□□ -1.853e-6■□□□□ 9.2
EIF3DO15371 USP34-222ENST00000498268 497 ntTSL 33.3□□□□□ -1.883e-6■□□□□ 9.2
EIF3DO15371 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.893e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-205ENST00000425804 581 ntTSL 22.44□□□□□ -2.023e-6■□□□□ 9.2
EIF3DO15371 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.18□□□□□ -2.063e-6■□□□□ 9.2
EIF3DO15371 FANCA-231ENST00000568626 727 ntTSL 313.21□□□□□ -0.294e-7■□□□□ 9.2
EIF3DO15371 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.487e-8■□□□□ 9.2
EIF3DO15371 MACF1-213ENST00000469490 842 ntTSL 55.07□□□□□ -1.63e-6■□□□□ 9.2
EIF3DO15371 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.42e-6■□□□□ 9.2
EIF3DO15371 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.442e-6■□□□□ 9.2
EIF3DO15371 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.562e-6■□□□□ 9.2
EIF3DO15371 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.582e-6■□□□□ 9.2
EIF3DO15371 MACF1-207ENST00000442046 2299 ntTSL 515□□□□□ -0.013e-8■□□□□ 9.2
EIF3DO15371 MACF1-202ENST00000360115 2824 ntTSL 514.43□□□□□ -0.13e-8■□□□□ 9.2
EIF3DO15371 MACF1-208ENST00000446276 2559 ntTSL 513□□□□□ -0.333e-8■□□□□ 9.2
EIF3DO15371 MACF1-216ENST00000476350 5304 ntTSL 29□□□□□ -0.973e-8■□□□□ 9.2
EIF3DO15371 MACF1-206ENST00000422234 477 ntTSL 58.39□□□□□ -1.073e-8■□□□□ 9.2
EIF3DO15371 MACF1-226ENST00000497964 4160 ntTSL 27.6□□□□□ -1.193e-8■□□□□ 9.2
EIF3DO15371 MACF1-210ENST00000462496 526 ntTSL 35.57□□□□□ -1.523e-8■□□□□ 9.2
EIF3DO15371 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.53■□□□□ 0.242e-9■□□□□ 9.2
EIF3DO15371 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.162e-9■□□□□ 9.2
EIF3DO15371 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.84□□□□□ -0.992e-9■□□□□ 9.2
EIF3DO15371 SLMAP-218ENST00000481846 556 ntTSL 421.26■□□□□ 0.992e-8■□□□□ 9.1
EIF3DO15371 HIST1H3D-203ENST00000635641 1637 ntTSL 519.75■□□□□ 0.754e-30■□□□□ 9.1
EIF3DO15371 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.732e-8■□□□□ 9.1
EIF3DO15371 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.354e-30■□□□□ 9.1
EIF3DO15371 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.014e-30■□□□□ 9.1
EIF3DO15371 C20orf24-205ENST00000491113 734 ntTSL 228.42■■■□□ 2.142e-18■□□□□ 9.1
EIF3DO15371 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.3■■□□□ 1.82e-18■□□□□ 9.1
EIF3DO15371 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.82e-18■□□□□ 9.1
EIF3DO15371 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.22■■□□□ 1.792e-18■□□□□ 9.1
EIF3DO15371 C20orf24-206ENST00000492721 1044 ntTSL 223.1■■□□□ 1.292e-18■□□□□ 9.1
EIF3DO15371 C20orf24-204ENST00000483815 1170 ntTSL 1 (best)19.32■□□□□ 0.682e-18■□□□□ 9.1
EIF3DO15371 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.382e-18■□□□□ 9.1
EIF3DO15371 APOC1-208ENST00000592535 430 ntTSL 1 (best)15□□□□□ -0.012e-6■□□□□ 9.1
EIF3DO15371 AC011481.3-201ENST00000623895 5594 ntBASIC14.29□□□□□ -0.122e-6■□□□□ 9.1
EIF3DO15371 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.29□□□□□ -0.122e-6■□□□□ 9.1
EIF3DO15371 APOC1-203ENST00000588802 553 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.612e-6■□□□□ 9.1
EIF3DO15371 APOC1-205ENST00000589781 273 ntTSL 3 BASIC11.21□□□□□ -0.612e-6■□□□□ 9.1
EIF3DO15371 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.972e-6■□□□□ 9.1
EIF3DO15371 RALY-202ENST00000333552 786 ntTSL 323.21■■□□□ 1.313e-11■□□□□ 9.1
EIF3DO15371 ODC1-204ENST00000446285 665 ntTSL 528.81■■■□□ 2.27e-9■□□□□ 9.1
EIF3DO15371 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.177e-9■□□□□ 9.1
EIF3DO15371 PCNX3-202ENST00000439247 3104 ntTSL 1 (best)14.4□□□□□ -0.13e-7■□□□□ 9.1
EIF3DO15371 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.87■■■□□ 2.211e-9■□□□□ 9.1
EIF3DO15371 PSME3-204ENST00000543428 956 ntTSL 223.13■■□□□ 1.298e-8■□□□□ 9.1
EIF3DO15371 PSME3-207ENST00000586114 580 ntTSL 422■■□□□ 1.118e-8■□□□□ 9.1
EIF3DO15371 PSME3-211ENST00000591152 1018 ntTSL 321.8■■□□□ 1.088e-8■□□□□ 9.1
EIF3DO15371 PSME3-209ENST00000589469 733 ntTSL 321.8■■□□□ 1.088e-8■□□□□ 9.1
Retrieved 100 of 4,069 protein–RNA pairs in 438 ms