RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 CHIC1Q5VXU3 224 aa9.83□□□□□ -0.84
R3HDM1-206ENST00000429703 AEBP2Q6ZN18 517 aaPredicted RBP9.63□□□□□ -0.87
R3HDM1-206ENST00000429703 PHF23Q9BUL5 403 aaPredicted RBP8.74□□□□□ -1.01
R3HDM1-206ENST00000429703 PLPPR3Q6T4P5 718 aa8.17□□□□□ -1.1
R3HDM1-206ENST00000429703 NISCHQ9Y2I1 1504 aa8.11□□□□□ -1.11
R3HDM1-206ENST00000429703 SENP3Q9H4L4 574 aaPredicted RBP8.03□□□□□ -1.12
R3HDM1-206ENST00000429703 PELP1Q8IZL8 1130 aaKnown RBP7.93□□□□□ -1.14
R3HDM1-206ENST00000429703 EHMT2Q96KQ7 1210 aa7.77□□□□□ -1.17
R3HDM1-206ENST00000429703 MYT1Q01538 1121 aa7.73□□□□□ -1.17
R3HDM1-206ENST00000429703 ADRA2BP18089 450 aa7.71□□□□□ -1.17
R3HDM1-206ENST00000429703 KCNA4P22459 653 aa7.69□□□□□ -1.18
R3HDM1-206ENST00000429703 PRKCSHP14314 528 aaPredicted RBP7.56□□□□□ -1.2
R3HDM1-206ENST00000429703 PPP6R1Q9UPN7 881 aa7.56□□□□□ -1.2
R3HDM1-206ENST00000429703 CCDC180Q9P1Z9 1646 aa7.55□□□□□ -1.2
R3HDM1-206ENST00000429703 HRCP23327 699 aa7.55□□□□□ -1.2
R3HDM1-206ENST00000429703 SCAF1Q9H7N4 1312 aaKnown RBP7.5□□□□□ -1.21
R3HDM1-206ENST00000429703 TTBK1Q5TCY1 1321 aaPredicted RBP7.48□□□□□ -1.21
R3HDM1-206ENST00000429703 CSRNP3Q8WYN3 585 aa7.44□□□□□ -1.22
R3HDM1-206ENST00000429703 FOXD1Q16676 465 aa7.44□□□□□ -1.22
R3HDM1-206ENST00000429703 PPARGC1BQ86YN6 1023 aaKnown RBP7.39□□□□□ -1.23
R3HDM1-206ENST00000429703 SLC4A1APQ9BWU0 796 aaKnown RBP7.39□□□□□ -1.23
R3HDM1-206ENST00000429703 APLP2Q06481 763 aa7.35□□□□□ -1.23
R3HDM1-206ENST00000429703 BCL11AQ9H165 835 aa7.34□□□□□ -1.23
R3HDM1-206ENST00000429703 FAM9AQ8IZU1 332 aaPredicted RBP7.33□□□□□ -1.24
R3HDM1-206ENST00000429703 PPP4R3CPQ6ZMV5 832 aa7.29□□□□□ -1.24
R3HDM1-206ENST00000429703 NCBP3Q53F19 620 aaKnown RBP7.19□□□□□ -1.26
R3HDM1-206ENST00000429703 MYO15BQ96JP2 1530 aa7.16□□□□□ -1.26
R3HDM1-206ENST00000429703 NPM3O75607 178 aaKnown RBP7.14□□□□□ -1.27
R3HDM1-206ENST00000429703 ERICH6Q7L0X2 663 aa7.13□□□□□ -1.27
R3HDM1-206ENST00000429703 PIAS4Q8N2W9 510 aaPredicted RBP7.12□□□□□ -1.27
R3HDM1-206ENST00000429703 ZBTB22O15209 634 aa7.11□□□□□ -1.27
R3HDM1-206ENST00000429703 SLC24A1O60721 1099 aa7.08□□□□□ -1.28
R3HDM1-206ENST00000429703 ACIN1Q9UKV3 1341 aaKnown RBP7.05□□□□□ -1.28
R3HDM1-206ENST00000429703 NEUROD1Q13562 356 aa7.04□□□□□ -1.28
R3HDM1-206ENST00000429703 PCGF6Q9BYE7 350 aa7.02□□□□□ -1.28
R3HDM1-206ENST00000429703 NACADO15069 1562 aa6.99□□□□□ -1.29
R3HDM1-206ENST00000429703 GTF3C3Q9Y5Q9 886 aa6.99□□□□□ -1.29
R3HDM1-206ENST00000429703 ABCC9O60706 1549 aa6.98□□□□□ -1.29
R3HDM1-206ENST00000429703 RB1CC1Q8TDY2 1594 aa6.98□□□□□ -1.29
R3HDM1-206ENST00000429703 CENPBP07199 599 aaPredicted RBP6.98□□□□□ -1.29
R3HDM1-206ENST00000429703 RTN4Q9NQC3 1192 aaKnown RBP6.97□□□□□ -1.29
R3HDM1-206ENST00000429703 CNKSR2Q8WXI2 1034 aa6.95□□□□□ -1.3
R3HDM1-206ENST00000429703 SHROOM4Q9ULL8 1493 aa6.95□□□□□ -1.3
R3HDM1-206ENST00000429703 DCAF1Q9Y4B6 1507 aa6.95□□□□□ -1.3
R3HDM1-206ENST00000429703 ANP32EQ9BTT0 268 aa6.94□□□□□ -1.3
R3HDM1-206ENST00000429703 UNC13AQ9UPW8 1703 aa6.91□□□□□ -1.3
R3HDM1-206ENST00000429703 AMER1Q5JTC6 1135 aaPredicted RBP6.9□□□□□ -1.3
R3HDM1-206ENST00000429703 FOXD4L1Q9NU39 408 aa6.9□□□□□ -1.3
R3HDM1-206ENST00000429703 DAXXQ9UER7 740 aaPredicted RBP6.85□□□□□ -1.31
R3HDM1-206ENST00000429703 ANO8Q9HCE9 1232 aaPredicted RBP6.84□□□□□ -1.31
R3HDM1-206ENST00000429703 UBE2Q2Q8WVN8 375 aa6.8□□□□□ -1.32
R3HDM1-206ENST00000429703 DNAJC5BQ9UF47 199 aa6.79□□□□□ -1.32
R3HDM1-206ENST00000429703 ZCCHC6Q5VYS8 1495 aaKnown RBP6.79□□□□□ -1.32
R3HDM1-206ENST00000429703 BICRAQ9NZM4 1560 aa6.79□□□□□ -1.32
R3HDM1-206ENST00000429703 PLEKHG5O94827 1062 aa6.79□□□□□ -1.32
R3HDM1-206ENST00000429703 ZEB1P37275 1124 aaPredicted RBP6.79□□□□□ -1.32
R3HDM1-206ENST00000429703 EIF5BO60841 1220 aaKnown RBP6.77□□□□□ -1.33
R3HDM1-206ENST00000429703 MAPK8IP2Q13387 824 aaPredicted RBP6.74□□□□□ -1.33
R3HDM1-206ENST00000429703 TSHZ2Q9NRE2 1034 aa6.72□□□□□ -1.33
R3HDM1-206ENST00000429703 RNF216Q9NWF9 866 aaPredicted RBP6.7□□□□□ -1.34
R3HDM1-206ENST00000429703 FKBP8Q14318 412 aa6.69□□□□□ -1.34
R3HDM1-206ENST00000429703 POTEDQ86YR6 584 aa6.69□□□□□ -1.34
R3HDM1-206ENST00000429703 SALL2Q9Y467 1007 aaPredicted RBP6.69□□□□□ -1.34
R3HDM1-206ENST00000429703 TRIM26Q12899 539 aaPredicted RBP6.67□□□□□ -1.34
R3HDM1-206ENST00000429703 DNAJC5Q9H3Z4 198 aa6.67□□□□□ -1.34
R3HDM1-206ENST00000429703 SLC4A2P04920 1241 aa6.64□□□□□ -1.35
R3HDM1-206ENST00000429703 CCDC136Q96JN2 1154 aa6.62□□□□□ -1.35
R3HDM1-206ENST00000429703 MSH5O43196 834 aa6.61□□□□□ -1.35
R3HDM1-206ENST00000429703 PKNOX2Q96KN3 472 aa6.59□□□□□ -1.35
R3HDM1-206ENST00000429703 ATXN8OSP0DMR3 200 aa6.59□□□□□ -1.36
R3HDM1-206ENST00000429703 SUPT16HQ9Y5B9 1047 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-206ENST00000429703 DIEXFQ68CQ4 756 aaKnown RBP6.57□□□□□ -1.36
R3HDM1-206ENST00000429703 PODXL2Q9NZ53 605 aa6.57□□□□□ -1.36
R3HDM1-206ENST00000429703 MYCNP04198 464 aaPredicted RBP6.56□□□□□ -1.36
R3HDM1-206ENST00000429703 EIF4G1Q04637 1599 aaKnown RBP6.55□□□□□ -1.36
R3HDM1-206ENST00000429703 HOXD11P31277 338 aaPredicted RBP6.55□□□□□ -1.36
R3HDM1-206ENST00000429703 TRIM41Q8WV44 630 aa6.53□□□□□ -1.36
R3HDM1-206ENST00000429703 CC2D2AQ9P2K1 1620 aa6.53□□□□□ -1.36
R3HDM1-206ENST00000429703 DMRT2Q9Y5R5 561 aa6.5□□□□□ -1.37
R3HDM1-206ENST00000429703 ERICH6BQ5W0A0 696 aa6.49□□□□□ -1.37
R3HDM1-206ENST00000429703 SCRIBQ14160 1630 aa6.49□□□□□ -1.37
R3HDM1-206ENST00000429703 PEG3Q9GZU2 1588 aa6.48□□□□□ -1.37
R3HDM1-206ENST00000429703 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.47□□□□□ -1.37
R3HDM1-206ENST00000429703 YTHDC1Q96MU7 727 aaKnown RBP6.47□□□□□ -1.37
R3HDM1-206ENST00000429703 DEKP35659 375 aaKnown RBP6.46□□□□□ -1.37
R3HDM1-206ENST00000429703 RBM19Q9Y4C8 960 aaKnown RBP6.45□□□□□ -1.38
R3HDM1-206ENST00000429703 HMGXB3Q12766 1538 aa6.44□□□□□ -1.38
R3HDM1-206ENST00000429703 CLSPNQ9HAW4 1339 aa6.44□□□□□ -1.38
R3HDM1-206ENST00000429703 LOC105371045A0A1W2PR82 267 aa6.44□□□□□ -1.38
R3HDM1-206ENST00000429703 SMARCA2P51531 1590 aa6.43□□□□□ -1.38
R3HDM1-206ENST00000429703 MIER1Q8N108 512 aa6.42□□□□□ -1.38
R3HDM1-206ENST00000429703 IL27Q8NEV9 243 aa6.42□□□□□ -1.38
R3HDM1-206ENST00000429703 ATF5Q9Y2D1 282 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-206ENST00000429703 CECR2Q9BXF3 1484 aa6.4□□□□□ -1.39
R3HDM1-206ENST00000429703 NCAPD3P42695 1498 aa6.38□□□□□ -1.39
R3HDM1-206ENST00000429703 SMARCA4P51532 1647 aa6.37□□□□□ -1.39
R3HDM1-206ENST00000429703 PLCB2Q00722 1185 aa6.37□□□□□ -1.39
R3HDM1-206ENST00000429703 FANCIQ9NVI1 1328 aa6.36□□□□□ -1.39
R3HDM1-206ENST00000429703 MYT1LQ9UL68 1186 aa6.35□□□□□ -1.39
R3HDM1-206ENST00000429703 FGD1P98174 961 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 850.9 ms