RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 NISCHQ9Y2I1 1504 aa16.56■□□□□ 0.24
MACF1-216ENST00000476350 DCAF8L2P0C7V8 631 aa15.07■□□□□ 0
MACF1-216ENST00000476350 SHROOM4Q9ULL8 1493 aa14.39□□□□□ -0.11
MACF1-216ENST00000476350 SUPT5HO00267 1087 aaKnown RBP14.19□□□□□ -0.14
MACF1-216ENST00000476350 FAM9AQ8IZU1 332 aaPredicted RBP14.1□□□□□ -0.15
MACF1-216ENST00000476350 ZCCHC6Q5VYS8 1495 aaKnown RBP14.07□□□□□ -0.16
MACF1-216ENST00000476350 CCDC180Q9P1Z9 1646 aa14.02□□□□□ -0.16
MACF1-216ENST00000476350 MYO15BQ96JP2 1530 aa13.95□□□□□ -0.18
MACF1-216ENST00000476350 HRCP23327 699 aa13.9□□□□□ -0.18
MACF1-216ENST00000476350 CHIC1Q5VXU3 224 aa13.85□□□□□ -0.19
MACF1-216ENST00000476350 PCGF6Q9BYE7 350 aa13.75□□□□□ -0.21
MACF1-216ENST00000476350 DCAF1Q9Y4B6 1507 aa13.62□□□□□ -0.23
MACF1-216ENST00000476350 PPARGC1BQ86YN6 1023 aaKnown RBP13.6□□□□□ -0.23
MACF1-216ENST00000476350 LOC105371045A0A1W2PR82 267 aa13.49□□□□□ -0.25
MACF1-216ENST00000476350 TRIM26Q12899 539 aaPredicted RBP13.42□□□□□ -0.26
MACF1-216ENST00000476350 ABCC9O60706 1549 aa13.38□□□□□ -0.27
MACF1-216ENST00000476350 ZEB1P37275 1124 aaPredicted RBP13.26□□□□□ -0.29
MACF1-216ENST00000476350 SCRIBQ14160 1630 aa13.24□□□□□ -0.29
MACF1-216ENST00000476350 TRIM41Q8WV44 630 aa13.19□□□□□ -0.3
MACF1-216ENST00000476350 RSF1Q96T23 1441 aaPredicted RBP13.19□□□□□ -0.3
MACF1-216ENST00000476350 RB1CC1Q8TDY2 1594 aa13.16□□□□□ -0.3
MACF1-216ENST00000476350 APLP2Q06481 763 aa13.13□□□□□ -0.31
MACF1-216ENST00000476350 EHMT2Q96KQ7 1210 aa13.07□□□□□ -0.32
MACF1-216ENST00000476350 PELP1Q8IZL8 1130 aaKnown RBP13.07□□□□□ -0.32
MACF1-216ENST00000476350 SCAF1Q9H7N4 1312 aaKnown RBP12.99□□□□□ -0.33
MACF1-216ENST00000476350 WIZO95785 1651 aa12.9□□□□□ -0.34
MACF1-216ENST00000476350 MROH2BQ7Z745 1585 aa12.9□□□□□ -0.34
MACF1-216ENST00000476350 CECR2Q9BXF3 1484 aa12.89□□□□□ -0.35
MACF1-216ENST00000476350 MYT1LQ9UL68 1186 aa12.89□□□□□ -0.35
MACF1-216ENST00000476350 NACADO15069 1562 aa12.87□□□□□ -0.35
MACF1-216ENST00000476350 PABPN1Q86U42 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
MACF1-216ENST00000476350 CCER1Q8TC90 406 aaPredicted RBP12.86□□□□□ -0.35
MACF1-216ENST00000476350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.85□□□□□ -0.35
MACF1-216ENST00000476350 BAZ1AQ9NRL2 1556 aaPredicted RBP12.85□□□□□ -0.35
MACF1-216ENST00000476350 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
MACF1-216ENST00000476350 ACIN1Q9UKV3 1341 aaKnown RBP12.79□□□□□ -0.36
MACF1-216ENST00000476350 ATP1B4Q9UN42 357 aaPredicted RBP12.76□□□□□ -0.37
MACF1-216ENST00000476350 DIEXFQ68CQ4 756 aaKnown RBP12.73□□□□□ -0.37
MACF1-216ENST00000476350 NEUROD1Q13562 356 aa12.72□□□□□ -0.37
MACF1-216ENST00000476350 TTBK1Q5TCY1 1321 aaPredicted RBP12.72□□□□□ -0.37
MACF1-216ENST00000476350 CENPBP07199 599 aaPredicted RBP12.71□□□□□ -0.37
MACF1-216ENST00000476350 HNRNPUL2Q1KMD3 747 aaKnown RBP12.71□□□□□ -0.37
MACF1-216ENST00000476350 ABCC8Q09428 1581 aa12.7□□□□□ -0.38
MACF1-216ENST00000476350 TOP2AP11388 1531 aaKnown RBP12.69□□□□□ -0.38
MACF1-216ENST00000476350 WRNQ14191 1432 aaPredicted RBP eCLIP12.68□□□□□ -0.38
MACF1-216ENST00000476350 NPM1P06748 294 aaKnown RBP eCLIP12.68□□□□□ -0.38
MACF1-216ENST00000476350 CEP162Q5TB80 1403 aa12.67□□□□□ -0.38
MACF1-216ENST00000476350 GTF3C3Q9Y5Q9 886 aa12.66□□□□□ -0.38
MACF1-216ENST00000476350 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
MACF1-216ENST00000476350 SMARCA2P51531 1590 aa12.62□□□□□ -0.39
MACF1-216ENST00000476350 SMARCA4P51532 1647 aa12.62□□□□□ -0.39
MACF1-216ENST00000476350 FBLN2P98095 1184 aa12.61□□□□□ -0.39
MACF1-216ENST00000476350 TNIKQ9UKE5 1360 aa12.6□□□□□ -0.39
MACF1-216ENST00000476350 SOGA1O94964 1423 aa12.59□□□□□ -0.39
MACF1-216ENST00000476350 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
MACF1-216ENST00000476350 UBTFP17480 764 aaKnown RBP12.55□□□□□ -0.4
MACF1-216ENST00000476350 EEA1Q15075 1411 aa12.54□□□□□ -0.4
MACF1-216ENST00000476350 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
MACF1-216ENST00000476350 YTHDC1Q96MU7 727 aaKnown RBP12.52□□□□□ -0.4
MACF1-216ENST00000476350 MYT1Q01538 1121 aa12.51□□□□□ -0.41
MACF1-216ENST00000476350 ESF1Q9H501 851 aaKnown RBP12.51□□□□□ -0.41
MACF1-216ENST00000476350 RUSC2Q8N2Y8 1516 aa12.5□□□□□ -0.41
MACF1-216ENST00000476350 CSRNP3Q8WYN3 585 aa12.5□□□□□ -0.41
MACF1-216ENST00000476350 UNC13AQ9UPW8 1703 aa12.49□□□□□ -0.41
MACF1-216ENST00000476350 RANGAP1P46060 587 aaPredicted RBP12.46□□□□□ -0.41
MACF1-216ENST00000476350 KIF21BO75037 1637 aa12.43□□□□□ -0.42
MACF1-216ENST00000476350 CEP164Q9UPV0 1460 aa12.41□□□□□ -0.42
MACF1-216ENST00000476350 MIER1Q8N108 512 aa12.4□□□□□ -0.43
MACF1-216ENST00000476350 SYNJ1O43426 1573 aa12.38□□□□□ -0.43
MACF1-216ENST00000476350 CLIP1P30622 1438 aa12.37□□□□□ -0.43
MACF1-216ENST00000476350 ERCC6Q03468 1493 aa12.33□□□□□ -0.44
MACF1-216ENST00000476350 VPS8Q8N3P4 1428 aa12.33□□□□□ -0.44
MACF1-216ENST00000476350 BAZ1BQ9UIG0 1483 aaKnown RBP12.33□□□□□ -0.44
MACF1-216ENST00000476350 PEG3Q9GZU2 1588 aa12.29□□□□□ -0.44
MACF1-216ENST00000476350 AEBP2Q6ZN18 517 aaPredicted RBP12.28□□□□□ -0.44
MACF1-216ENST00000476350 TRHP20396 242 aaPredicted RBP12.28□□□□□ -0.44
MACF1-216ENST00000476350 RAPGEF2Q9Y4G8 1499 aa12.28□□□□□ -0.44
MACF1-216ENST00000476350 BICRAQ9NZM4 1560 aa12.24□□□□□ -0.45
MACF1-216ENST00000476350 CDK11AQ9UQ88 783 aaPredicted RBP12.22□□□□□ -0.45
MACF1-216ENST00000476350 TOP2BQ02880 1626 aa12.2□□□□□ -0.46
MACF1-216ENST00000476350 CHMP7Q8WUX9 453 aaPredicted RBP12.2□□□□□ -0.46
MACF1-216ENST00000476350 DHX57Q6P158 1386 aaKnown RBP12.18□□□□□ -0.46
MACF1-216ENST00000476350 CLSPNQ9HAW4 1339 aa12.18□□□□□ -0.46
MACF1-216ENST00000476350 ATAD2BQ9ULI0 1458 aa12.17□□□□□ -0.46
MACF1-216ENST00000476350 BIVM-ERCC5R4GMW8 1640 aa12.17□□□□□ -0.46
MACF1-216ENST00000476350 ARAP1Q96P48 1450 aa12.17□□□□□ -0.46
MACF1-216ENST00000476350 BCANQ96GW7 911 aa12.17□□□□□ -0.46
MACF1-216ENST00000476350 ERICH3Q5RHP9 1530 aa12.16□□□□□ -0.46
MACF1-216ENST00000476350 SUPT16HQ9Y5B9 1047 aaKnown RBP12.13□□□□□ -0.47
MACF1-216ENST00000476350 KANK4Q5T7N3 995 aaPredicted RBP12.09□□□□□ -0.47
MACF1-216ENST00000476350 RRBP1Q9P2E9 1410 aaKnown RBP12.09□□□□□ -0.47
MACF1-216ENST00000476350 PRXQ9BXM0 1461 aa12.07□□□□□ -0.48
MACF1-216ENST00000476350 CUX2O14529 1486 aa12.05□□□□□ -0.48
MACF1-216ENST00000476350 STAG3Q9UJ98 1225 aa12.04□□□□□ -0.48
MACF1-216ENST00000476350 CCNB3Q8WWL7 1395 aa12.02□□□□□ -0.48
MACF1-216ENST00000476350 ITGAEP38570 1179 aa12.02□□□□□ -0.48
MACF1-216ENST00000476350 CUX1P39880 1505 aa12.02□□□□□ -0.49
MACF1-216ENST00000476350 KIF27Q86VH2 1401 aa12.01□□□□□ -0.49
MACF1-216ENST00000476350 ARHGAP35Q9NRY4 1499 aa11.98□□□□□ -0.49
MACF1-216ENST00000476350 TSHZ2Q9NRE2 1034 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms