RNA–Protein interactions for RNA: ENST00000620535.4

NOP2-223, Transcript of NOP2 nucleolar protein, humanhuman

TSL 1 (best) BASIC

Gene NOP2, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP2-223ENST00000620535 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
NOP2-223ENST00000620535 SHROOM4Q9ULL8 1493 aa20.55■□□□□ 0.88
NOP2-223ENST00000620535 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
NOP2-223ENST00000620535 ZCCHC6Q5VYS8 1495 aaKnown RBP20.05■□□□□ 0.8
NOP2-223ENST00000620535 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
NOP2-223ENST00000620535 DCAF8L2P0C7V8 631 aa20.01■□□□□ 0.79
NOP2-223ENST00000620535 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
NOP2-223ENST00000620535 MYO15BQ96JP2 1530 aa19.45■□□□□ 0.7
NOP2-223ENST00000620535 DCAF1Q9Y4B6 1507 aa19.32■□□□□ 0.68
NOP2-223ENST00000620535 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
NOP2-223ENST00000620535 PCGF6Q9BYE7 350 aa19.04■□□□□ 0.64
NOP2-223ENST00000620535 SCRIBQ14160 1630 aa19.01■□□□□ 0.63
NOP2-223ENST00000620535 HRCP23327 699 aa18.93■□□□□ 0.62
NOP2-223ENST00000620535 ABCC9O60706 1549 aa18.92■□□□□ 0.62
NOP2-223ENST00000620535 RSF1Q96T23 1441 aaPredicted RBP18.85■□□□□ 0.61
NOP2-223ENST00000620535 PPARGC1BQ86YN6 1023 aaKnown RBP18.72■□□□□ 0.59
NOP2-223ENST00000620535 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
NOP2-223ENST00000620535 TRIM41Q8WV44 630 aa18.69■□□□□ 0.58
NOP2-223ENST00000620535 FAM9AQ8IZU1 332 aaPredicted RBP18.68■□□□□ 0.58
NOP2-223ENST00000620535 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.57
NOP2-223ENST00000620535 CECR2Q9BXF3 1484 aa18.63■□□□□ 0.57
NOP2-223ENST00000620535 NACADO15069 1562 aa18.56■□□□□ 0.56
NOP2-223ENST00000620535 MROH2BQ7Z745 1585 aa18.53■□□□□ 0.56
NOP2-223ENST00000620535 TRIM26Q12899 539 aaPredicted RBP18.53■□□□□ 0.56
NOP2-223ENST00000620535 WIZO95785 1651 aa18.44■□□□□ 0.54
NOP2-223ENST00000620535 BAZ1AQ9NRL2 1556 aaPredicted RBP18.21■□□□□ 0.51
NOP2-223ENST00000620535 ABCC8Q09428 1581 aa18.1■□□□□ 0.49
NOP2-223ENST00000620535 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.491e-6■■■□□ 18.6
NOP2-223ENST00000620535 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.48
NOP2-223ENST00000620535 UNC13AQ9UPW8 1703 aa18.07■□□□□ 0.48
NOP2-223ENST00000620535 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
NOP2-223ENST00000620535 SMARCA4P51532 1647 aa18.06■□□□□ 0.48
NOP2-223ENST00000620535 TOP2AP11388 1531 aaKnown RBP18.04■□□□□ 0.48
NOP2-223ENST00000620535 ZEB1P37275 1124 aaPredicted RBP18.03■□□□□ 0.48
NOP2-223ENST00000620535 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.48
NOP2-223ENST00000620535 SMARCA2P51531 1590 aa17.99■□□□□ 0.47
NOP2-223ENST00000620535 SOGA1O94964 1423 aa17.94■□□□□ 0.46
NOP2-223ENST00000620535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.93■□□□□ 0.46
NOP2-223ENST00000620535 RUSC2Q8N2Y8 1516 aa17.87■□□□□ 0.45
NOP2-223ENST00000620535 BICRAQ9NZM4 1560 aa17.84■□□□□ 0.45
NOP2-223ENST00000620535 UBTFP17480 764 aaKnown RBP17.83■□□□□ 0.45
NOP2-223ENST00000620535 CCER1Q8TC90 406 aaPredicted RBP17.82■□□□□ 0.44
NOP2-223ENST00000620535 CEP162Q5TB80 1403 aa17.81■□□□□ 0.44
NOP2-223ENST00000620535 CSRNP3Q8WYN3 585 aa17.8■□□□□ 0.44
NOP2-223ENST00000620535 TNIKQ9UKE5 1360 aa17.72■□□□□ 0.43
NOP2-223ENST00000620535 WRNQ14191 1432 aaPredicted RBP eCLIP17.71■□□□□ 0.42
NOP2-223ENST00000620535 EEA1Q15075 1411 aa17.64■□□□□ 0.41
NOP2-223ENST00000620535 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
NOP2-223ENST00000620535 SYNJ1O43426 1573 aa17.63■□□□□ 0.41
NOP2-223ENST00000620535 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
NOP2-223ENST00000620535 ATAD2BQ9ULI0 1458 aa17.62■□□□□ 0.41
NOP2-223ENST00000620535 GOLGA3Q08378 1498 aa17.61■□□□□ 0.41
NOP2-223ENST00000620535 BAZ1BQ9UIG0 1483 aaKnown RBP17.59■□□□□ 0.41
NOP2-223ENST00000620535 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
NOP2-223ENST00000620535 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
NOP2-223ENST00000620535 CEP164Q9UPV0 1460 aa17.49■□□□□ 0.39
NOP2-223ENST00000620535 CLIP1P30622 1438 aa17.47■□□□□ 0.39
NOP2-223ENST00000620535 RAPGEF2Q9Y4G8 1499 aa17.46■□□□□ 0.39
NOP2-223ENST00000620535 DIEXFQ68CQ4 756 aaKnown RBP17.46■□□□□ 0.39
NOP2-223ENST00000620535 KIF21BO75037 1637 aa17.43■□□□□ 0.38
NOP2-223ENST00000620535 APLP2Q06481 763 aa17.38■□□□□ 0.37
NOP2-223ENST00000620535 VPS8Q8N3P4 1428 aa17.36■□□□□ 0.37
NOP2-223ENST00000620535 NEUROD1Q13562 356 aa17.35■□□□□ 0.37
NOP2-223ENST00000620535 TOP2BQ02880 1626 aa17.33■□□□□ 0.37
NOP2-223ENST00000620535 ACIN1Q9UKV3 1341 aaKnown RBP17.3■□□□□ 0.36
NOP2-223ENST00000620535 ZNF316A6NFI3 1004 aaPredicted RBP17.28■□□□□ 0.36
NOP2-223ENST00000620535 BIVM-ERCC5R4GMW8 1640 aa17.23■□□□□ 0.35
NOP2-223ENST00000620535 CUX1P39880 1505 aa17.22■□□□□ 0.35
NOP2-223ENST00000620535 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
NOP2-223ENST00000620535 KANK4Q5T7N3 995 aaPredicted RBP17.21■□□□□ 0.35
NOP2-223ENST00000620535 PRXQ9BXM0 1461 aa17.2■□□□□ 0.34
NOP2-223ENST00000620535 YTHDC1Q96MU7 727 aaKnown RBP17.18■□□□□ 0.34
NOP2-223ENST00000620535 GTF3C3Q9Y5Q9 886 aa17.17■□□□□ 0.34
NOP2-223ENST00000620535 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
NOP2-223ENST00000620535 ARAP1Q96P48 1450 aa17.17■□□□□ 0.34
NOP2-223ENST00000620535 CENPBP07199 599 aaPredicted RBP17.15■□□□□ 0.34
NOP2-223ENST00000620535 KIF27Q86VH2 1401 aa17.13■□□□□ 0.33
NOP2-223ENST00000620535 ERICH3Q5RHP9 1530 aa17.13■□□□□ 0.33
NOP2-223ENST00000620535 MIER1Q8N108 512 aa17.12■□□□□ 0.33
NOP2-223ENST00000620535 CFTRP13569 1480 aa17.12■□□□□ 0.33
NOP2-223ENST00000620535 ITGAEP38570 1179 aa17.08■□□□□ 0.33
NOP2-223ENST00000620535 PELP1Q8IZL8 1130 aaKnown RBP17.04■□□□□ 0.32
NOP2-223ENST00000620535 CUX2O14529 1486 aa17.02■□□□□ 0.32
NOP2-223ENST00000620535 ARHGAP35Q9NRY4 1499 aa17.02■□□□□ 0.32
NOP2-223ENST00000620535 DHX57Q6P158 1386 aaKnown RBP17.02■□□□□ 0.31
NOP2-223ENST00000620535 IGF1RP08069 1367 aa16.99■□□□□ 0.31
NOP2-223ENST00000620535 CADPSQ9ULU8 1353 aa16.96■□□□□ 0.31
NOP2-223ENST00000620535 P3H3Q8IVL6 736 aa16.95■□□□□ 0.3
NOP2-223ENST00000620535 RRBP1Q9P2E9 1410 aaKnown RBP16.93■□□□□ 0.3
NOP2-223ENST00000620535 FGD5Q6ZNL6 1462 aa16.93■□□□□ 0.3
NOP2-223ENST00000620535 CCNB3Q8WWL7 1395 aa16.93■□□□□ 0.3
NOP2-223ENST00000620535 CARMIL1Q5VZK9 1371 aa16.92■□□□□ 0.3
NOP2-223ENST00000620535 ATP1B4Q9UN42 357 aaPredicted RBP16.92■□□□□ 0.3
NOP2-223ENST00000620535 PRDM2Q13029 1718 aa16.88■□□□□ 0.29
NOP2-223ENST00000620535 CLSPNQ9HAW4 1339 aa16.87■□□□□ 0.29
NOP2-223ENST00000620535 CC2D2AQ9P2K1 1620 aa16.84■□□□□ 0.29
NOP2-223ENST00000620535 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
NOP2-223ENST00000620535 RAD54L2Q9Y4B4 1467 aa16.82■□□□□ 0.28
NOP2-223ENST00000620535 FANCD2Q9BXW9 1451 aa16.81■□□□□ 0.28
NOP2-223ENST00000620535 RAB3GAP2Q9H2M9 1393 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms