RNA–Protein interactions for RNA: ENST00000588750.5

APOC1-202, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-202ENST00000588750 NISCHQ9Y2I1 1504 aa19.51■□□□□ 0.71
APOC1-202ENST00000588750 CCDC180Q9P1Z9 1646 aa17.37■□□□□ 0.37
APOC1-202ENST00000588750 ABCC9O60706 1549 aa16.8■□□□□ 0.28
APOC1-202ENST00000588750 NACADO15069 1562 aa16.31■□□□□ 0.2
APOC1-202ENST00000588750 RB1CC1Q8TDY2 1594 aa16.3■□□□□ 0.2
APOC1-202ENST00000588750 DCAF8L2P0C7V8 631 aa16.28■□□□□ 0.2
APOC1-202ENST00000588750 MYO15BQ96JP2 1530 aa16.27■□□□□ 0.2
APOC1-202ENST00000588750 ZCCHC6Q5VYS8 1495 aaKnown RBP16.27■□□□□ 0.19
APOC1-202ENST00000588750 DCAF1Q9Y4B6 1507 aa16.21■□□□□ 0.19
APOC1-202ENST00000588750 UNC13AQ9UPW8 1703 aa15.82■□□□□ 0.12
APOC1-202ENST00000588750 SCRIBQ14160 1630 aa15.77■□□□□ 0.12
APOC1-202ENST00000588750 SHROOM4Q9ULL8 1493 aa15.71■□□□□ 0.1
APOC1-202ENST00000588750 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
APOC1-202ENST00000588750 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
APOC1-202ENST00000588750 EIF4G1Q04637 1599 aaKnown RBP15.32■□□□□ 0.04
APOC1-202ENST00000588750 CC2D2AQ9P2K1 1620 aa15.22■□□□□ 0.03
APOC1-202ENST00000588750 DNAJC5BQ9UF47 199 aa15.21■□□□□ 0.03
APOC1-202ENST00000588750 BAZ1AQ9NRL2 1556 aaPredicted RBP15.17■□□□□ 0.02
APOC1-202ENST00000588750 SMARCA4P51532 1647 aa15.12■□□□□ 0.01
APOC1-202ENST00000588750 CECR2Q9BXF3 1484 aa15.12■□□□□ 0.01
APOC1-202ENST00000588750 SMARCA2P51531 1590 aa15.07■□□□□ 0
APOC1-202ENST00000588750 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
APOC1-202ENST00000588750 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
APOC1-202ENST00000588750 MROH2BQ7Z745 1585 aa14.99□□□□□ -0.01
APOC1-202ENST00000588750 PEG3Q9GZU2 1588 aa14.99□□□□□ -0.01
APOC1-202ENST00000588750 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
APOC1-202ENST00000588750 BAZ1BQ9UIG0 1483 aaKnown RBP14.94□□□□□ -0.02
APOC1-202ENST00000588750 RSF1Q96T23 1441 aaPredicted RBP14.88□□□□□ -0.03
APOC1-202ENST00000588750 WIZO95785 1651 aa14.84□□□□□ -0.03
APOC1-202ENST00000588750 TOP2AP11388 1531 aaKnown RBP14.75□□□□□ -0.05
APOC1-202ENST00000588750 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
APOC1-202ENST00000588750 SUPT5HO00267 1087 aaKnown RBP14.6□□□□□ -0.07
APOC1-202ENST00000588750 CADPSQ9ULU8 1353 aa14.59□□□□□ -0.07
APOC1-202ENST00000588750 PDS5BQ9NTI5 1447 aa14.56□□□□□ -0.08
APOC1-202ENST00000588750 ERCC6Q03468 1493 aa14.56□□□□□ -0.08
APOC1-202ENST00000588750 CCDC88BA6NC98 1476 aa14.54□□□□□ -0.08
APOC1-202ENST00000588750 NESP48681 1621 aa14.52□□□□□ -0.09
APOC1-202ENST00000588750 CFTRP13569 1480 aa14.5□□□□□ -0.09
APOC1-202ENST00000588750 PRDM2Q13029 1718 aa14.44□□□□□ -0.1
APOC1-202ENST00000588750 CEP164Q9UPV0 1460 aa14.41□□□□□ -0.1
APOC1-202ENST00000588750 FANCD2Q9BXW9 1451 aa14.4□□□□□ -0.1
APOC1-202ENST00000588750 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
APOC1-202ENST00000588750 CUX2O14529 1486 aa14.38□□□□□ -0.11
APOC1-202ENST00000588750 MRC2Q9UBG0 1479 aa14.35□□□□□ -0.11
APOC1-202ENST00000588750 THOC2Q8NI27 1593 aaKnown RBP14.32□□□□□ -0.12
APOC1-202ENST00000588750 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
APOC1-202ENST00000588750 WDR62O43379 1518 aa14.28□□□□□ -0.12
APOC1-202ENST00000588750 AEBP2Q6ZN18 517 aaPredicted RBP14.25□□□□□ -0.13
APOC1-202ENST00000588750 DNMBPQ6XZF7 1577 aa14.2□□□□□ -0.14
APOC1-202ENST00000588750 URB2Q14146 1524 aaKnown RBP14.2□□□□□ -0.14
APOC1-202ENST00000588750 TOPBP1Q92547 1522 aa14.17□□□□□ -0.14
APOC1-202ENST00000588750 IFT140Q96RY7 1462 aa14.11□□□□□ -0.15
APOC1-202ENST00000588750 WRNQ14191 1432 aaPredicted RBP eCLIP14.08□□□□□ -0.15
APOC1-202ENST00000588750 CHIC1Q5VXU3 224 aa14.07□□□□□ -0.16
APOC1-202ENST00000588750 CUX1P39880 1505 aa14.06□□□□□ -0.16
APOC1-202ENST00000588750 POLA1P09884 1462 aaPredicted RBP14.05□□□□□ -0.16
APOC1-202ENST00000588750 FGD5Q6ZNL6 1462 aa14.04□□□□□ -0.16
APOC1-202ENST00000588750 SOGA1O94964 1423 aa14.03□□□□□ -0.16
APOC1-202ENST00000588750 TOP2BQ02880 1626 aa14.03□□□□□ -0.16
APOC1-202ENST00000588750 BIVM-ERCC5R4GMW8 1640 aa14.03□□□□□ -0.16
APOC1-202ENST00000588750 WDR97A6NE52 1622 aa14.01□□□□□ -0.17
APOC1-202ENST00000588750 TARBP1Q13395 1621 aaKnown RBP13.98□□□□□ -0.17
APOC1-202ENST00000588750 SYNJ1O43426 1573 aa13.96□□□□□ -0.17
APOC1-202ENST00000588750 RAD54L2Q9Y4B4 1467 aa13.94□□□□□ -0.18
APOC1-202ENST00000588750 EIF4G3O43432 1585 aaKnown RBP13.93□□□□□ -0.18
APOC1-202ENST00000588750 ABCA10Q8WWZ4 1543 aa13.93□□□□□ -0.18
APOC1-202ENST00000588750 ZNF608Q9ULD9 1512 aaPredicted RBP13.93□□□□□ -0.18
APOC1-202ENST00000588750 AQRO60306 1485 aaKnown RBP eCLIP13.89□□□□□ -0.198e-8■■■■■ 40.2
APOC1-202ENST00000588750 TDRD9Q8NDG6 1382 aaKnown RBP13.89□□□□□ -0.19
APOC1-202ENST00000588750 GRIN2BQ13224 1484 aa13.87□□□□□ -0.19
APOC1-202ENST00000588750 GAPVD1Q14C86 1478 aa13.87□□□□□ -0.19
APOC1-202ENST00000588750 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
APOC1-202ENST00000588750 ABCA5Q8WWZ7 1642 aa13.85□□□□□ -0.19
APOC1-202ENST00000588750 MAGI1Q96QZ7 1491 aaPredicted RBP13.84□□□□□ -0.19
APOC1-202ENST00000588750 PBRM1Q86U86 1689 aa13.82□□□□□ -0.2
APOC1-202ENST00000588750 KIF27Q86VH2 1401 aa13.81□□□□□ -0.2
APOC1-202ENST00000588750 OSCARQ8IYS5 282 aa13.8□□□□□ -0.2
APOC1-202ENST00000588750 SNAPC4Q5SXM2 1469 aa13.8□□□□□ -0.2
APOC1-202ENST00000588750 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
APOC1-202ENST00000588750 CHMP7Q8WUX9 453 aaPredicted RBP13.78□□□□□ -0.2
APOC1-202ENST00000588750 FBLN2P98095 1184 aa13.77□□□□□ -0.21
APOC1-202ENST00000588750 SYNJ2O15056 1496 aa13.76□□□□□ -0.21
APOC1-202ENST00000588750 DNAJC5Q9H3Z4 198 aa13.75□□□□□ -0.21
APOC1-202ENST00000588750 FHAD1B1AJZ9 1412 aa13.73□□□□□ -0.21
APOC1-202ENST00000588750 CHD1O14646 1710 aa13.73□□□□□ -0.21
APOC1-202ENST00000588750 CUL7Q14999 1698 aa13.71□□□□□ -0.21
APOC1-202ENST00000588750 ADAMTS12P58397 1594 aa13.71□□□□□ -0.22
APOC1-202ENST00000588750 EEA1Q15075 1411 aa13.67□□□□□ -0.22
APOC1-202ENST00000588750 IGF1RP08069 1367 aa13.67□□□□□ -0.22
APOC1-202ENST00000588750 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
APOC1-202ENST00000588750 CARMIL1Q5VZK9 1371 aa13.64□□□□□ -0.23
APOC1-202ENST00000588750 NUP160Q12769 1436 aa13.59□□□□□ -0.23
APOC1-202ENST00000588750 RAPGEF2Q9Y4G8 1499 aa13.58□□□□□ -0.24
APOC1-202ENST00000588750 CLASP1Q7Z460 1538 aa13.57□□□□□ -0.24
APOC1-202ENST00000588750 RUSC2Q8N2Y8 1516 aa13.56□□□□□ -0.24
APOC1-202ENST00000588750 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
APOC1-202ENST00000588750 CEP170Q5SW79 1584 aa13.54□□□□□ -0.24
APOC1-202ENST00000588750 KIAA0586Q9BVV6 1533 aa13.53□□□□□ -0.24
APOC1-202ENST00000588750 ARHGEF11O15085 1522 aa13.51□□□□□ -0.25
APOC1-202ENST00000588750 PRXQ9BXM0 1461 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms