RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 NISCHQ9Y2I1 1504 aa37.09■■■■□ 3.53
CDC42BPB-204ENST00000559043 CCDC180Q9P1Z9 1646 aa32.58■■■□□ 2.81
CDC42BPB-204ENST00000559043 ABCC9O60706 1549 aa31.5■■■□□ 2.63
CDC42BPB-204ENST00000559043 ZCCHC6Q5VYS8 1495 aaKnown RBP30.99■■■□□ 2.55
CDC42BPB-204ENST00000559043 DCAF8L2P0C7V8 631 aa30.86■■■□□ 2.53
CDC42BPB-204ENST00000559043 DCAF1Q9Y4B6 1507 aa30.62■■■□□ 2.49
CDC42BPB-204ENST00000559043 NACADO15069 1562 aa30.54■■■□□ 2.48
CDC42BPB-204ENST00000559043 MYO15BQ96JP2 1530 aa30.52■■■□□ 2.48
CDC42BPB-204ENST00000559043 RB1CC1Q8TDY2 1594 aa30.42■■■□□ 2.46
CDC42BPB-204ENST00000559043 SCRIBQ14160 1630 aa29.91■■■□□ 2.38
CDC42BPB-204ENST00000559043 UNC13AQ9UPW8 1703 aa29.83■■■□□ 2.37
CDC42BPB-204ENST00000559043 SHROOM4Q9ULL8 1493 aa29.79■■■□□ 2.36
CDC42BPB-204ENST00000559043 PABPN1Q86U42 306 aaKnown RBP eCLIP29.63■■■□□ 2.33
CDC42BPB-204ENST00000559043 BICRAQ9NZM4 1560 aa29.61■■■□□ 2.33
CDC42BPB-204ENST00000559043 CECR2Q9BXF3 1484 aa28.93■■■□□ 2.22
CDC42BPB-204ENST00000559043 EIF4G1Q04637 1599 aaKnown RBP28.72■■■□□ 2.19
CDC42BPB-204ENST00000559043 MROH2BQ7Z745 1585 aa28.65■■■□□ 2.18
CDC42BPB-204ENST00000559043 BAZ1AQ9NRL2 1556 aaPredicted RBP28.64■■■□□ 2.18
CDC42BPB-204ENST00000559043 SMARCA4P51532 1647 aa28.62■■■□□ 2.17
CDC42BPB-204ENST00000559043 DNAJC5BQ9UF47 199 aa28.55■■■□□ 2.16
CDC42BPB-204ENST00000559043 RSF1Q96T23 1441 aaPredicted RBP28.53■■■□□ 2.16
CDC42BPB-204ENST00000559043 CC2D2AQ9P2K1 1620 aa28.48■■■□□ 2.15
CDC42BPB-204ENST00000559043 ATAD2BQ9ULI0 1458 aa28.36■■■□□ 2.13
CDC42BPB-204ENST00000559043 WIZO95785 1651 aa28.36■■■□□ 2.13
CDC42BPB-204ENST00000559043 SUPT5HO00267 1087 aaKnown RBP28.32■■■□□ 2.12
CDC42BPB-204ENST00000559043 PEG3Q9GZU2 1588 aa28.31■■■□□ 2.12
CDC42BPB-204ENST00000559043 SMARCA2P51531 1590 aa28.26■■■□□ 2.11
CDC42BPB-204ENST00000559043 NCAPD3P42695 1498 aa28.24■■■□□ 2.11
CDC42BPB-204ENST00000559043 BAZ1BQ9UIG0 1483 aaKnown RBP28.11■■■□□ 2.09
CDC42BPB-204ENST00000559043 HMGXB3Q12766 1538 aa28.08■■■□□ 2.09
CDC42BPB-204ENST00000559043 TOP2AP11388 1531 aaKnown RBP28■■■□□ 2.07
CDC42BPB-204ENST00000559043 CCDC88BA6NC98 1476 aa27.77■■■□□ 2.04
CDC42BPB-204ENST00000559043 NESP48681 1621 aa27.48■■□□□ 1.99
CDC42BPB-204ENST00000559043 CADPSQ9ULU8 1353 aa27.46■■□□□ 1.99
CDC42BPB-204ENST00000559043 CFTRP13569 1480 aa27.42■■□□□ 1.98
CDC42BPB-204ENST00000559043 LAMC3Q9Y6N6 1575 aa27.33■■□□□ 1.97
CDC42BPB-204ENST00000559043 PDS5BQ9NTI5 1447 aa27.15■■□□□ 1.94
CDC42BPB-204ENST00000559043 PRDM2Q13029 1718 aa27.14■■□□□ 1.93
CDC42BPB-204ENST00000559043 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
CDC42BPB-204ENST00000559043 KIF21AQ7Z4S6 1674 aa27.08■■□□□ 1.93
CDC42BPB-204ENST00000559043 ERCC6Q03468 1493 aa27.01■■□□□ 1.92
CDC42BPB-204ENST00000559043 CEP164Q9UPV0 1460 aa27■■□□□ 1.91
CDC42BPB-204ENST00000559043 ABCC8Q09428 1581 aa26.95■■□□□ 1.9
CDC42BPB-204ENST00000559043 URB2Q14146 1524 aaKnown RBP26.87■■□□□ 1.89
CDC42BPB-204ENST00000559043 MRC2Q9UBG0 1479 aa26.85■■□□□ 1.89
CDC42BPB-204ENST00000559043 WRNQ14191 1432 aaPredicted RBP eCLIP26.83■■□□□ 1.89
CDC42BPB-204ENST00000559043 THOC2Q8NI27 1593 aaKnown RBP26.82■■□□□ 1.88
CDC42BPB-204ENST00000559043 CUX1P39880 1505 aa26.82■■□□□ 1.88
CDC42BPB-204ENST00000559043 CHIC1Q5VXU3 224 aa26.78■■□□□ 1.88
CDC42BPB-204ENST00000559043 TOPBP1Q92547 1522 aa26.77■■□□□ 1.88
CDC42BPB-204ENST00000559043 SYNJ1O43426 1573 aa26.76■■□□□ 1.87
CDC42BPB-204ENST00000559043 WDR62O43379 1518 aa26.74■■□□□ 1.87
CDC42BPB-204ENST00000559043 DNMBPQ6XZF7 1577 aa26.74■■□□□ 1.87
CDC42BPB-204ENST00000559043 TOP2BQ02880 1626 aa26.68■■□□□ 1.86
CDC42BPB-204ENST00000559043 BIVM-ERCC5R4GMW8 1640 aa26.65■■□□□ 1.86
CDC42BPB-204ENST00000559043 TRIM41Q8WV44 630 aa26.64■■□□□ 1.86
CDC42BPB-204ENST00000559043 FGD5Q6ZNL6 1462 aa26.61■■□□□ 1.85
CDC42BPB-204ENST00000559043 POLA1P09884 1462 aaPredicted RBP26.6■■□□□ 1.85
CDC42BPB-204ENST00000559043 CUX2O14529 1486 aa26.57■■□□□ 1.84
CDC42BPB-204ENST00000559043 RAD54L2Q9Y4B4 1467 aa26.53■■□□□ 1.84
CDC42BPB-204ENST00000559043 SOGA1O94964 1423 aa26.51■■□□□ 1.83
CDC42BPB-204ENST00000559043 TARBP1Q13395 1621 aaKnown RBP26.44■■□□□ 1.82
CDC42BPB-204ENST00000559043 IFT140Q96RY7 1462 aa26.41■■□□□ 1.82
CDC42BPB-204ENST00000559043 ZNF608Q9ULD9 1512 aaPredicted RBP26.36■■□□□ 1.81
CDC42BPB-204ENST00000559043 ABCA10Q8WWZ4 1543 aa26.36■■□□□ 1.81
CDC42BPB-204ENST00000559043 TDRD9Q8NDG6 1382 aaKnown RBP26.35■■□□□ 1.81
CDC42BPB-204ENST00000559043 WDR97A6NE52 1622 aa26.31■■□□□ 1.8
CDC42BPB-204ENST00000559043 RUSC2Q8N2Y8 1516 aa26.31■■□□□ 1.8
CDC42BPB-204ENST00000559043 AQRO60306 1485 aaKnown RBP eCLIP26.29■■□□□ 1.85e-6■■□□□ 12.8
CDC42BPB-204ENST00000559043 KIF27Q86VH2 1401 aa26.19■■□□□ 1.78
CDC42BPB-204ENST00000559043 GAPVD1Q14C86 1478 aa26.18■■□□□ 1.78
CDC42BPB-204ENST00000559043 EIF4G3O43432 1585 aaKnown RBP26.18■■□□□ 1.78
CDC42BPB-204ENST00000559043 ABCA5Q8WWZ7 1642 aa26.18■■□□□ 1.78
CDC42BPB-204ENST00000559043 FAM9AQ8IZU1 332 aaPredicted RBP26.18■■□□□ 1.78
CDC42BPB-204ENST00000559043 IGF1RP08069 1367 aa26.12■■□□□ 1.77
CDC42BPB-204ENST00000559043 GRIN2BQ13224 1484 aa26.07■■□□□ 1.76
CDC42BPB-204ENST00000559043 CSRNP3Q8WYN3 585 aa26.04■■□□□ 1.76
CDC42BPB-204ENST00000559043 PBRM1Q86U86 1689 aa26.04■■□□□ 1.76
CDC42BPB-204ENST00000559043 EEA1Q15075 1411 aa26.02■■□□□ 1.76
CDC42BPB-204ENST00000559043 ERICH3Q5RHP9 1530 aa26.02■■□□□ 1.76
CDC42BPB-204ENST00000559043 SNAPC4Q5SXM2 1469 aa25.99■■□□□ 1.75
CDC42BPB-204ENST00000559043 CARMIL1Q5VZK9 1371 aa25.93■■□□□ 1.74
CDC42BPB-204ENST00000559043 MAGI1Q96QZ7 1491 aaPredicted RBP25.92■■□□□ 1.74
CDC42BPB-204ENST00000559043 PRXQ9BXM0 1461 aa25.89■■□□□ 1.74
CDC42BPB-204ENST00000559043 ADAMTS12P58397 1594 aa25.88■■□□□ 1.73
CDC42BPB-204ENST00000559043 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
CDC42BPB-204ENST00000559043 FBLN2P98095 1184 aa25.85■■□□□ 1.73
CDC42BPB-204ENST00000559043 CUL7Q14999 1698 aa25.85■■□□□ 1.73
CDC42BPB-204ENST00000559043 EHMT2Q96KQ7 1210 aa25.84■■□□□ 1.73
CDC42BPB-204ENST00000559043 SYNJ2O15056 1496 aa25.83■■□□□ 1.73
CDC42BPB-204ENST00000559043 CHMP7Q8WUX9 453 aaPredicted RBP25.83■■□□□ 1.73
CDC42BPB-204ENST00000559043 RAPGEF2Q9Y4G8 1499 aa25.8■■□□□ 1.72
CDC42BPB-204ENST00000559043 LOC105371045A0A1W2PR82 267 aa25.76■■□□□ 1.72
CDC42BPB-204ENST00000559043 GRIN2AQ12879 1464 aa25.75■■□□□ 1.71
CDC42BPB-204ENST00000559043 CHD1O14646 1710 aa25.75■■□□□ 1.71
CDC42BPB-204ENST00000559043 KIF21BO75037 1637 aa25.74■■□□□ 1.71
CDC42BPB-204ENST00000559043 GOLGA3Q08378 1498 aa25.65■■□□□ 1.7
CDC42BPB-204ENST00000559043 CEP170Q5SW79 1584 aa25.63■■□□□ 1.69
CDC42BPB-204ENST00000559043 NUP160Q12769 1436 aa25.62■■□□□ 1.69
CDC42BPB-204ENST00000559043 UBTFP17480 764 aaKnown RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms