RNA–Protein interactions for RNA: ENST00000588802.5

APOC1-203, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-203ENST00000588802 NISCHQ9Y2I1 1504 aa24.76■■□□□ 1.55
APOC1-203ENST00000588802 ABCC9O60706 1549 aa22.24■■□□□ 1.15
APOC1-203ENST00000588802 CCDC180Q9P1Z9 1646 aa22.17■■□□□ 1.14
APOC1-203ENST00000588802 DCAF8L2P0C7V8 631 aa21.14■□□□□ 0.97
APOC1-203ENST00000588802 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
APOC1-203ENST00000588802 NACADO15069 1562 aa21.02■□□□□ 0.95
APOC1-203ENST00000588802 DNAJC5BQ9UF47 199 aa20.82■□□□□ 0.92
APOC1-203ENST00000588802 MYO15BQ96JP2 1530 aa20.82■□□□□ 0.92
APOC1-203ENST00000588802 PABPN1Q86U42 306 aaKnown RBP eCLIP20.79■□□□□ 0.92
APOC1-203ENST00000588802 UNC13AQ9UPW8 1703 aa20.56■□□□□ 0.88
APOC1-203ENST00000588802 DCAF1Q9Y4B6 1507 aa20.53■□□□□ 0.88
APOC1-203ENST00000588802 ZCCHC6Q5VYS8 1495 aaKnown RBP20.52■□□□□ 0.88
APOC1-203ENST00000588802 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
APOC1-203ENST00000588802 SHROOM4Q9ULL8 1493 aa20.35■□□□□ 0.85
APOC1-203ENST00000588802 SCRIBQ14160 1630 aa20.29■□□□□ 0.84
APOC1-203ENST00000588802 CC2D2AQ9P2K1 1620 aa20.01■□□□□ 0.79
APOC1-203ENST00000588802 CECR2Q9BXF3 1484 aa19.98■□□□□ 0.79
APOC1-203ENST00000588802 EIF4G1Q04637 1599 aaKnown RBP19.96■□□□□ 0.79
APOC1-203ENST00000588802 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
APOC1-203ENST00000588802 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.68
APOC1-203ENST00000588802 SMARCA4P51532 1647 aa19.29■□□□□ 0.68
APOC1-203ENST00000588802 SMARCA2P51531 1590 aa19.29■□□□□ 0.68
APOC1-203ENST00000588802 HMGXB3Q12766 1538 aa19.24■□□□□ 0.67
APOC1-203ENST00000588802 BAZ1AQ9NRL2 1556 aaPredicted RBP19.23■□□□□ 0.67
APOC1-203ENST00000588802 ERCC6Q03468 1493 aa19.17■□□□□ 0.66
APOC1-203ENST00000588802 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
APOC1-203ENST00000588802 PEG3Q9GZU2 1588 aa19.14■□□□□ 0.65
APOC1-203ENST00000588802 MROH2BQ7Z745 1585 aa19.13■□□□□ 0.65
APOC1-203ENST00000588802 CUX2O14529 1486 aa19.12■□□□□ 0.65
APOC1-203ENST00000588802 NESP48681 1621 aa19.11■□□□□ 0.65
APOC1-203ENST00000588802 DNAJC5Q9H3Z4 198 aa19.04■□□□□ 0.64
APOC1-203ENST00000588802 LAMC3Q9Y6N6 1575 aa18.93■□□□□ 0.62
APOC1-203ENST00000588802 WIZO95785 1651 aa18.91■□□□□ 0.62
APOC1-203ENST00000588802 PDS5BQ9NTI5 1447 aa18.87■□□□□ 0.61
APOC1-203ENST00000588802 CADPSQ9ULU8 1353 aa18.81■□□□□ 0.6
APOC1-203ENST00000588802 THOC2Q8NI27 1593 aaKnown RBP18.8■□□□□ 0.6
APOC1-203ENST00000588802 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
APOC1-203ENST00000588802 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
APOC1-203ENST00000588802 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
APOC1-203ENST00000588802 TOP2AP11388 1531 aaKnown RBP18.62■□□□□ 0.57
APOC1-203ENST00000588802 CFTRP13569 1480 aa18.6■□□□□ 0.57
APOC1-203ENST00000588802 FANCD2Q9BXW9 1451 aa18.6■□□□□ 0.57
APOC1-203ENST00000588802 CEP164Q9UPV0 1460 aa18.59■□□□□ 0.57
APOC1-203ENST00000588802 WDR62O43379 1518 aa18.59■□□□□ 0.57
APOC1-203ENST00000588802 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.55
APOC1-203ENST00000588802 URB2Q14146 1524 aaKnown RBP18.44■□□□□ 0.54
APOC1-203ENST00000588802 TRIM41Q8WV44 630 aa18.36■□□□□ 0.53
APOC1-203ENST00000588802 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
APOC1-203ENST00000588802 ABCC8Q09428 1581 aa18.28■□□□□ 0.52
APOC1-203ENST00000588802 OSCARQ8IYS5 282 aa18.27■□□□□ 0.52
APOC1-203ENST00000588802 IFT140Q96RY7 1462 aa18.24■□□□□ 0.51
APOC1-203ENST00000588802 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
APOC1-203ENST00000588802 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
APOC1-203ENST00000588802 SUPT5HO00267 1087 aaKnown RBP18.17■□□□□ 0.5
APOC1-203ENST00000588802 DNMBPQ6XZF7 1577 aa18.14■□□□□ 0.49
APOC1-203ENST00000588802 AQRO60306 1485 aaKnown RBP eCLIP18.1■□□□□ 0.498e-8■■■■■ 40.2
APOC1-203ENST00000588802 FBLN2P98095 1184 aa18.07■□□□□ 0.48
APOC1-203ENST00000588802 EIF4G3O43432 1585 aaKnown RBP18.07■□□□□ 0.48
APOC1-203ENST00000588802 POLA1P09884 1462 aaPredicted RBP18.06■□□□□ 0.48
APOC1-203ENST00000588802 RAD54L2Q9Y4B4 1467 aa18.06■□□□□ 0.48
APOC1-203ENST00000588802 TARBP1Q13395 1621 aaKnown RBP18.02■□□□□ 0.48
APOC1-203ENST00000588802 SOGA1O94964 1423 aa18.02■□□□□ 0.48
APOC1-203ENST00000588802 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.47
APOC1-203ENST00000588802 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
APOC1-203ENST00000588802 CUX1P39880 1505 aa17.96■□□□□ 0.47
APOC1-203ENST00000588802 RIMBP3CA6NJZ7 1639 aa17.95■□□□□ 0.46
APOC1-203ENST00000588802 RIMBP3BA6NNM3 1639 aa17.95■□□□□ 0.46
APOC1-203ENST00000588802 RIMBP3Q9UFD9 1639 aa17.95■□□□□ 0.46
APOC1-203ENST00000588802 WDR97A6NE52 1622 aa17.94■□□□□ 0.46
APOC1-203ENST00000588802 ARHGEF11O15085 1522 aa17.92■□□□□ 0.46
APOC1-203ENST00000588802 CHD1O14646 1710 aa17.92■□□□□ 0.46
APOC1-203ENST00000588802 CYB5RLQ6IPT4 315 aa17.9■□□□□ 0.46
APOC1-203ENST00000588802 SNAPC4Q5SXM2 1469 aa17.88■□□□□ 0.45
APOC1-203ENST00000588802 CHMP7Q8WUX9 453 aaPredicted RBP17.87■□□□□ 0.45
APOC1-203ENST00000588802 MAGI1Q96QZ7 1491 aaPredicted RBP17.82■□□□□ 0.44
APOC1-203ENST00000588802 GRIN2BQ13224 1484 aa17.81■□□□□ 0.44
APOC1-203ENST00000588802 GAPVD1Q14C86 1478 aa17.77■□□□□ 0.44
APOC1-203ENST00000588802 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
APOC1-203ENST00000588802 SYNJ2O15056 1496 aa17.75■□□□□ 0.43
APOC1-203ENST00000588802 ABCA10Q8WWZ4 1543 aa17.74■□□□□ 0.43
APOC1-203ENST00000588802 SYNJ1O43426 1573 aa17.71■□□□□ 0.43
APOC1-203ENST00000588802 TRHP20396 242 aaPredicted RBP17.71■□□□□ 0.43
APOC1-203ENST00000588802 WRNQ14191 1432 aaPredicted RBP eCLIP17.71■□□□□ 0.43
APOC1-203ENST00000588802 PBRM1Q86U86 1689 aa17.71■□□□□ 0.42
APOC1-203ENST00000588802 CLASP1Q7Z460 1538 aa17.69■□□□□ 0.42
APOC1-203ENST00000588802 ABCA5Q8WWZ7 1642 aa17.67■□□□□ 0.42
APOC1-203ENST00000588802 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
APOC1-203ENST00000588802 BIVM-ERCC5R4GMW8 1640 aa17.62■□□□□ 0.41
APOC1-203ENST00000588802 GRIN2AQ12879 1464 aa17.57■□□□□ 0.4
APOC1-203ENST00000588802 ADAMTS12P58397 1594 aa17.56■□□□□ 0.4
APOC1-203ENST00000588802 FHAD1B1AJZ9 1412 aa17.55■□□□□ 0.4
APOC1-203ENST00000588802 ERICH3Q5RHP9 1530 aa17.53■□□□□ 0.4
APOC1-203ENST00000588802 NUP160Q12769 1436 aa17.53■□□□□ 0.4
APOC1-203ENST00000588802 CEP170Q5SW79 1584 aa17.51■□□□□ 0.39
APOC1-203ENST00000588802 ERCC6L2Q5T890 1561 aa17.51■□□□□ 0.39
APOC1-203ENST00000588802 JPH4Q96JJ6 628 aa17.41■□□□□ 0.38
APOC1-203ENST00000588802 PRG4Q92954 1404 aaPredicted RBP17.4■□□□□ 0.38
APOC1-203ENST00000588802 SHROOM2Q13796 1616 aa17.38■□□□□ 0.37
APOC1-203ENST00000588802 IGF1RP08069 1367 aa17.36■□□□□ 0.37
APOC1-203ENST00000588802 KIF27Q86VH2 1401 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms