RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 NISCHQ9Y2I1 1504 aa35.71■■■■□ 3.31
CDC42BPB-209ENST00000634889 CCDC180Q9P1Z9 1646 aa31.77■■■□□ 2.68
CDC42BPB-209ENST00000634889 ABCC9O60706 1549 aa30.84■■■□□ 2.53
CDC42BPB-209ENST00000634889 NACADO15069 1562 aa29.81■■■□□ 2.36
CDC42BPB-209ENST00000634889 RB1CC1Q8TDY2 1594 aa29.81■■■□□ 2.36
CDC42BPB-209ENST00000634889 ZCCHC6Q5VYS8 1495 aaKnown RBP29.8■■■□□ 2.36
CDC42BPB-209ENST00000634889 MYO15BQ96JP2 1530 aa29.71■■■□□ 2.35
CDC42BPB-209ENST00000634889 DCAF8L2P0C7V8 631 aa29.65■■■□□ 2.34
CDC42BPB-209ENST00000634889 DCAF1Q9Y4B6 1507 aa29.61■■■□□ 2.33
CDC42BPB-209ENST00000634889 UNC13AQ9UPW8 1703 aa29.13■■■□□ 2.25
CDC42BPB-209ENST00000634889 SCRIBQ14160 1630 aa28.91■■■□□ 2.22
CDC42BPB-209ENST00000634889 BICRAQ9NZM4 1560 aa28.88■■■□□ 2.21
CDC42BPB-209ENST00000634889 PABPN1Q86U42 306 aaKnown RBP eCLIP28.79■■■□□ 2.2
CDC42BPB-209ENST00000634889 SHROOM4Q9ULL8 1493 aa28.68■■■□□ 2.18
CDC42BPB-209ENST00000634889 DNAJC5BQ9UF47 199 aa28.14■■■□□ 2.1
CDC42BPB-209ENST00000634889 EIF4G1Q04637 1599 aaKnown RBP28.11■■■□□ 2.09
CDC42BPB-209ENST00000634889 CC2D2AQ9P2K1 1620 aa27.96■■■□□ 2.07
CDC42BPB-209ENST00000634889 CECR2Q9BXF3 1484 aa27.75■■■□□ 2.03
CDC42BPB-209ENST00000634889 BAZ1AQ9NRL2 1556 aaPredicted RBP27.7■■■□□ 2.03
CDC42BPB-209ENST00000634889 SMARCA4P51532 1647 aa27.7■■■□□ 2.02
CDC42BPB-209ENST00000634889 SMARCA2P51531 1590 aa27.51■■□□□ 1.99
CDC42BPB-209ENST00000634889 MROH2BQ7Z745 1585 aa27.5■■□□□ 1.99
CDC42BPB-209ENST00000634889 ATAD2BQ9ULI0 1458 aa27.49■■□□□ 1.99
CDC42BPB-209ENST00000634889 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
CDC42BPB-209ENST00000634889 PEG3Q9GZU2 1588 aa27.47■■□□□ 1.99
CDC42BPB-209ENST00000634889 HMGXB3Q12766 1538 aa27.39■■□□□ 1.98
CDC42BPB-209ENST00000634889 BAZ1BQ9UIG0 1483 aaKnown RBP27.29■■□□□ 1.96
CDC42BPB-209ENST00000634889 RSF1Q96T23 1441 aaPredicted RBP27.23■■□□□ 1.95
CDC42BPB-209ENST00000634889 WIZO95785 1651 aa27.21■■□□□ 1.95
CDC42BPB-209ENST00000634889 TOP2AP11388 1531 aaKnown RBP26.97■■□□□ 1.91
CDC42BPB-209ENST00000634889 LAMC3Q9Y6N6 1575 aa26.77■■□□□ 1.88
CDC42BPB-209ENST00000634889 NESP48681 1621 aa26.72■■□□□ 1.87
CDC42BPB-209ENST00000634889 CADPSQ9ULU8 1353 aa26.66■■□□□ 1.86
CDC42BPB-209ENST00000634889 ERCC6Q03468 1493 aa26.61■■□□□ 1.85
CDC42BPB-209ENST00000634889 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
CDC42BPB-209ENST00000634889 PDS5BQ9NTI5 1447 aa26.55■■□□□ 1.84
CDC42BPB-209ENST00000634889 CFTRP13569 1480 aa26.55■■□□□ 1.84
CDC42BPB-209ENST00000634889 SUPT5HO00267 1087 aaKnown RBP26.53■■□□□ 1.84
CDC42BPB-209ENST00000634889 KIF21AQ7Z4S6 1674 aa26.47■■□□□ 1.83
CDC42BPB-209ENST00000634889 PRDM2Q13029 1718 aa26.42■■□□□ 1.82
CDC42BPB-209ENST00000634889 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
CDC42BPB-209ENST00000634889 FANCD2Q9BXW9 1451 aa26.36■■□□□ 1.81
CDC42BPB-209ENST00000634889 CEP164Q9UPV0 1460 aa26.34■■□□□ 1.81
CDC42BPB-209ENST00000634889 CUX2O14529 1486 aa26.33■■□□□ 1.81
CDC42BPB-209ENST00000634889 MRC2Q9UBG0 1479 aa26.27■■□□□ 1.8
CDC42BPB-209ENST00000634889 WDR62O43379 1518 aa26.2■■□□□ 1.79
CDC42BPB-209ENST00000634889 URB2Q14146 1524 aaKnown RBP26.09■■□□□ 1.77
CDC42BPB-209ENST00000634889 ABCC8Q09428 1581 aa26.01■■□□□ 1.75
CDC42BPB-209ENST00000634889 DNMBPQ6XZF7 1577 aa25.96■■□□□ 1.75
CDC42BPB-209ENST00000634889 TOPBP1Q92547 1522 aa25.96■■□□□ 1.75
CDC42BPB-209ENST00000634889 CUX1P39880 1505 aa25.8■■□□□ 1.72
CDC42BPB-209ENST00000634889 IFT140Q96RY7 1462 aa25.79■■□□□ 1.72
CDC42BPB-209ENST00000634889 POLA1P09884 1462 aaPredicted RBP25.73■■□□□ 1.71
CDC42BPB-209ENST00000634889 FGD5Q6ZNL6 1462 aa25.69■■□□□ 1.7
CDC42BPB-209ENST00000634889 TARBP1Q13395 1621 aaKnown RBP25.68■■□□□ 1.7
CDC42BPB-209ENST00000634889 WRNQ14191 1432 aaPredicted RBP eCLIP25.68■■□□□ 1.7
CDC42BPB-209ENST00000634889 BIVM-ERCC5R4GMW8 1640 aa25.66■■□□□ 1.7
CDC42BPB-209ENST00000634889 TOP2BQ02880 1626 aa25.65■■□□□ 1.7
CDC42BPB-209ENST00000634889 SOGA1O94964 1423 aa25.62■■□□□ 1.69
CDC42BPB-209ENST00000634889 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
CDC42BPB-209ENST00000634889 ZNF608Q9ULD9 1512 aaPredicted RBP25.6■■□□□ 1.69
CDC42BPB-209ENST00000634889 RAD54L2Q9Y4B4 1467 aa25.59■■□□□ 1.69
CDC42BPB-209ENST00000634889 EIF4G3O43432 1585 aaKnown RBP25.57■■□□□ 1.68
CDC42BPB-209ENST00000634889 WDR97A6NE52 1622 aa25.55■■□□□ 1.68
CDC42BPB-209ENST00000634889 ABCA10Q8WWZ4 1543 aa25.47■■□□□ 1.67
CDC42BPB-209ENST00000634889 AQRO60306 1485 aaKnown RBP eCLIP25.47■■□□□ 1.67
CDC42BPB-209ENST00000634889 TDRD9Q8NDG6 1382 aaKnown RBP25.44■■□□□ 1.66
CDC42BPB-209ENST00000634889 ABCA5Q8WWZ7 1642 aa25.38■■□□□ 1.65
CDC42BPB-209ENST00000634889 GAPVD1Q14C86 1478 aa25.34■■□□□ 1.65
CDC42BPB-209ENST00000634889 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
CDC42BPB-209ENST00000634889 PBRM1Q86U86 1689 aa25.32■■□□□ 1.64
CDC42BPB-209ENST00000634889 DNAJC5Q9H3Z4 198 aa25.31■■□□□ 1.64
CDC42BPB-209ENST00000634889 MAGI1Q96QZ7 1491 aaPredicted RBP25.28■■□□□ 1.64
CDC42BPB-209ENST00000634889 SNAPC4Q5SXM2 1469 aa25.27■■□□□ 1.64
CDC42BPB-209ENST00000634889 CHD1O14646 1710 aa25.22■■□□□ 1.63
CDC42BPB-209ENST00000634889 OSCARQ8IYS5 282 aa25.2■■□□□ 1.62
CDC42BPB-209ENST00000634889 ERICH3Q5RHP9 1530 aa25.19■■□□□ 1.62
CDC42BPB-209ENST00000634889 SYNJ2O15056 1496 aa25.17■■□□□ 1.62
CDC42BPB-209ENST00000634889 KIF27Q86VH2 1401 aa25.14■■□□□ 1.62
CDC42BPB-209ENST00000634889 ADAMTS12P58397 1594 aa25.13■■□□□ 1.61
CDC42BPB-209ENST00000634889 FBLN2P98095 1184 aa25.1■■□□□ 1.61
CDC42BPB-209ENST00000634889 TRIM41Q8WV44 630 aa25.1■■□□□ 1.61
CDC42BPB-209ENST00000634889 CHMP7Q8WUX9 453 aaPredicted RBP25.09■■□□□ 1.61
CDC42BPB-209ENST00000634889 FHAD1B1AJZ9 1412 aa25.07■■□□□ 1.6
CDC42BPB-209ENST00000634889 GRIN2AQ12879 1464 aa25.02■■□□□ 1.6
CDC42BPB-209ENST00000634889 CUL7Q14999 1698 aa25.01■■□□□ 1.59
CDC42BPB-209ENST00000634889 IGF1RP08069 1367 aa24.99■■□□□ 1.59
CDC42BPB-209ENST00000634889 CLASP1Q7Z460 1538 aa24.96■■□□□ 1.59
CDC42BPB-209ENST00000634889 NUP160Q12769 1436 aa24.9■■□□□ 1.58
CDC42BPB-209ENST00000634889 RUSC2Q8N2Y8 1516 aa24.88■■□□□ 1.57
CDC42BPB-209ENST00000634889 CEP170Q5SW79 1584 aa24.88■■□□□ 1.57
CDC42BPB-209ENST00000634889 CARMIL1Q5VZK9 1371 aa24.85■■□□□ 1.57
CDC42BPB-209ENST00000634889 CHIC1Q5VXU3 224 aa24.85■■□□□ 1.57
CDC42BPB-209ENST00000634889 ARHGEF11O15085 1522 aa24.82■■□□□ 1.56
CDC42BPB-209ENST00000634889 RIMBP3CA6NJZ7 1639 aa24.82■■□□□ 1.56
CDC42BPB-209ENST00000634889 RIMBP3BA6NNM3 1639 aa24.82■■□□□ 1.56
CDC42BPB-209ENST00000634889 RIMBP3Q9UFD9 1639 aa24.82■■□□□ 1.56
CDC42BPB-209ENST00000634889 EEA1Q15075 1411 aa24.78■■□□□ 1.56
CDC42BPB-209ENST00000634889 RAPGEF2Q9Y4G8 1499 aa24.75■■□□□ 1.55
CDC42BPB-209ENST00000634889 SHROOM2Q13796 1616 aa24.73■■□□□ 1.55
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