RNA–Protein interactions for RNA: ENST00000462496.5

MACF1-210, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-210ENST00000462496 CHIC1Q5VXU3 224 aa12.25□□□□□ -0.45
MACF1-210ENST00000462496 AEBP2Q6ZN18 517 aaPredicted RBP12.1□□□□□ -0.47
MACF1-210ENST00000462496 NISCHQ9Y2I1 1504 aa11.03□□□□□ -0.64
MACF1-210ENST00000462496 PHF23Q9BUL5 403 aaPredicted RBP10.8□□□□□ -0.68
MACF1-210ENST00000462496 SENP3Q9H4L4 574 aaPredicted RBP10.21□□□□□ -0.77
MACF1-210ENST00000462496 PLPPR3Q6T4P5 718 aa10.12□□□□□ -0.79
MACF1-210ENST00000462496 CCDC180Q9P1Z9 1646 aa9.55□□□□□ -0.88
MACF1-210ENST00000462496 ADRA2BP18089 450 aa9.41□□□□□ -0.9
MACF1-210ENST00000462496 FOXD1Q16676 465 aa9.4□□□□□ -0.9
MACF1-210ENST00000462496 PPP6R1Q9UPN7 881 aa9.37□□□□□ -0.91
MACF1-210ENST00000462496 ZCCHC6Q5VYS8 1495 aaKnown RBP9.31□□□□□ -0.92
MACF1-210ENST00000462496 KCNA4P22459 653 aa9.2□□□□□ -0.94
MACF1-210ENST00000462496 DCAF1Q9Y4B6 1507 aa9.15□□□□□ -0.94
MACF1-210ENST00000462496 SHROOM4Q9ULL8 1493 aa9.05□□□□□ -0.96
MACF1-210ENST00000462496 EHMT2Q96KQ7 1210 aa9□□□□□ -0.97
MACF1-210ENST00000462496 MYO15BQ96JP2 1530 aa8.96□□□□□ -0.97
MACF1-210ENST00000462496 PPP4R3CPQ6ZMV5 832 aa8.96□□□□□ -0.98
MACF1-210ENST00000462496 PIAS4Q8N2W9 510 aaPredicted RBP8.94□□□□□ -0.98
MACF1-210ENST00000462496 DCAF8L2P0C7V8 631 aa8.91□□□□□ -0.98
MACF1-210ENST00000462496 NCBP3Q53F19 620 aaKnown RBP8.85□□□□□ -0.99
MACF1-210ENST00000462496 SLC4A1APQ9BWU0 796 aaKnown RBP8.84□□□□□ -0.99
MACF1-210ENST00000462496 NACADO15069 1562 aa8.82□□□□□ -1
MACF1-210ENST00000462496 SUPT5HO00267 1087 aaKnown RBP8.81□□□□□ -1
MACF1-210ENST00000462496 CSRNP3Q8WYN3 585 aa8.79□□□□□ -1
MACF1-210ENST00000462496 ABCC9O60706 1549 aa8.76□□□□□ -1.01
MACF1-210ENST00000462496 SCRIBQ14160 1630 aa8.75□□□□□ -1.01
MACF1-210ENST00000462496 NPM3O75607 178 aaKnown RBP8.71□□□□□ -1.02
MACF1-210ENST00000462496 RB1CC1Q8TDY2 1594 aa8.69□□□□□ -1.02
MACF1-210ENST00000462496 CNKSR2Q8WXI2 1034 aa8.64□□□□□ -1.03
MACF1-210ENST00000462496 RSF1Q96T23 1441 aaPredicted RBP8.62□□□□□ -1.03
MACF1-210ENST00000462496 SCAF1Q9H7N4 1312 aaKnown RBP8.61□□□□□ -1.03
MACF1-210ENST00000462496 DNAJC5BQ9UF47 199 aa8.54□□□□□ -1.04
MACF1-210ENST00000462496 UNC13AQ9UPW8 1703 aa8.54□□□□□ -1.04
MACF1-210ENST00000462496 MSH5O43196 834 aa8.53□□□□□ -1.04
MACF1-210ENST00000462496 CECR2Q9BXF3 1484 aa8.52□□□□□ -1.05
MACF1-210ENST00000462496 MROH2BQ7Z745 1585 aa8.52□□□□□ -1.05
MACF1-210ENST00000462496 BAZ1AQ9NRL2 1556 aaPredicted RBP8.49□□□□□ -1.05
MACF1-210ENST00000462496 ZBTB22O15209 634 aa8.48□□□□□ -1.05
MACF1-210ENST00000462496 WIZO95785 1651 aa8.46□□□□□ -1.06
MACF1-210ENST00000462496 BICRAQ9NZM4 1560 aa8.44□□□□□ -1.06
MACF1-210ENST00000462496 SMARCA4P51532 1647 aa8.43□□□□□ -1.06
MACF1-210ENST00000462496 TOP2AP11388 1531 aaKnown RBP8.39□□□□□ -1.07
MACF1-210ENST00000462496 FOXD4L1Q9NU39 408 aa8.38□□□□□ -1.07
MACF1-210ENST00000462496 EIF4G1Q04637 1599 aaKnown RBP8.37□□□□□ -1.07
MACF1-210ENST00000462496 RNF216Q9NWF9 866 aaPredicted RBP8.37□□□□□ -1.07
MACF1-210ENST00000462496 MAPK8IP2Q13387 824 aaPredicted RBP8.36□□□□□ -1.07
MACF1-210ENST00000462496 PEG3Q9GZU2 1588 aa8.35□□□□□ -1.07
MACF1-210ENST00000462496 SMARCA2P51531 1590 aa8.32□□□□□ -1.08
MACF1-210ENST00000462496 TRIM41Q8WV44 630 aa8.29□□□□□ -1.08
MACF1-210ENST00000462496 CCDC88BA6NC98 1476 aa8.29□□□□□ -1.08
MACF1-210ENST00000462496 PABPN1Q86U42 306 aaKnown RBP eCLIP8.28□□□□□ -1.08
MACF1-210ENST00000462496 HOXD11P31277 338 aaPredicted RBP8.25□□□□□ -1.09
MACF1-210ENST00000462496 LOC105371045A0A1W2PR82 267 aa8.24□□□□□ -1.09
MACF1-210ENST00000462496 ATAD2BQ9ULI0 1458 aa8.23□□□□□ -1.09
MACF1-210ENST00000462496 DMRT2Q9Y5R5 561 aa8.22□□□□□ -1.09
MACF1-210ENST00000462496 BAZ1BQ9UIG0 1483 aaKnown RBP8.18□□□□□ -1.1
MACF1-210ENST00000462496 ABCC8Q09428 1581 aa8.17□□□□□ -1.1
MACF1-210ENST00000462496 HMGXB3Q12766 1538 aa8.15□□□□□ -1.1
MACF1-210ENST00000462496 SLC4A2P04920 1241 aa8.14□□□□□ -1.11
MACF1-210ENST00000462496 NCAPD3P42695 1498 aa8.13□□□□□ -1.11
MACF1-210ENST00000462496 EEA1Q15075 1411 aa8.12□□□□□ -1.11
MACF1-210ENST00000462496 FAM9AQ8IZU1 332 aaPredicted RBP8.11□□□□□ -1.11
MACF1-210ENST00000462496 ATXN8OSP0DMR3 200 aa8.1□□□□□ -1.11
MACF1-210ENST00000462496 WRNQ14191 1432 aaPredicted RBP eCLIP8.1□□□□□ -1.11
MACF1-210ENST00000462496 SYNJ1O43426 1573 aa8.07□□□□□ -1.12
MACF1-210ENST00000462496 PCGF6Q9BYE7 350 aa8.07□□□□□ -1.12
MACF1-210ENST00000462496 MYCNP04198 464 aaPredicted RBP8.06□□□□□ -1.12
MACF1-210ENST00000462496 HRCP23327 699 aa8.06□□□□□ -1.12
MACF1-210ENST00000462496 TRIM26Q12899 539 aaPredicted RBP8.06□□□□□ -1.12
MACF1-210ENST00000462496 SOGA1O94964 1423 aa8.05□□□□□ -1.12
MACF1-210ENST00000462496 BIVM-ERCC5R4GMW8 1640 aa8.04□□□□□ -1.12
MACF1-210ENST00000462496 TOP2BQ02880 1626 aa8.03□□□□□ -1.12
MACF1-210ENST00000462496 TNIKQ9UKE5 1360 aa8.02□□□□□ -1.13
MACF1-210ENST00000462496 RUSC2Q8N2Y8 1516 aa8.02□□□□□ -1.13
MACF1-210ENST00000462496 PRDM2Q13029 1718 aa8.01□□□□□ -1.13
MACF1-210ENST00000462496 KIF21BO75037 1637 aa8.01□□□□□ -1.13
MACF1-210ENST00000462496 CFTRP13569 1480 aa8□□□□□ -1.13
MACF1-210ENST00000462496 GOLGA3Q08378 1498 aa8□□□□□ -1.13
MACF1-210ENST00000462496 CEP164Q9UPV0 1460 aa7.98□□□□□ -1.13
MACF1-210ENST00000462496 CEP162Q5TB80 1403 aa7.97□□□□□ -1.13
MACF1-210ENST00000462496 AMER1Q5JTC6 1135 aaPredicted RBP7.97□□□□□ -1.13
MACF1-210ENST00000462496 CC2D2AQ9P2K1 1620 aa7.96□□□□□ -1.13
MACF1-210ENST00000462496 CUX1P39880 1505 aa7.95□□□□□ -1.14
MACF1-210ENST00000462496 CADPSQ9ULU8 1353 aa7.92□□□□□ -1.14
MACF1-210ENST00000462496 ERICH3Q5RHP9 1530 aa7.92□□□□□ -1.14
MACF1-210ENST00000462496 RTN4Q9NQC3 1192 aaKnown RBP7.91□□□□□ -1.14
MACF1-210ENST00000462496 PRXQ9BXM0 1461 aa7.9□□□□□ -1.14
MACF1-210ENST00000462496 UBTFP17480 764 aaKnown RBP7.89□□□□□ -1.15
MACF1-210ENST00000462496 RAPGEF2Q9Y4G8 1499 aa7.88□□□□□ -1.15
MACF1-210ENST00000462496 FKBP8Q14318 412 aa7.88□□□□□ -1.15
MACF1-210ENST00000462496 KIF27Q86VH2 1401 aa7.86□□□□□ -1.15
MACF1-210ENST00000462496 ZEB1P37275 1124 aaPredicted RBP7.86□□□□□ -1.15
MACF1-210ENST00000462496 CLIP1P30622 1438 aa7.86□□□□□ -1.15
MACF1-210ENST00000462496 SLC24A1O60721 1099 aa7.84□□□□□ -1.15
MACF1-210ENST00000462496 FANCD2Q9BXW9 1451 aa7.83□□□□□ -1.16
MACF1-210ENST00000462496 VPS8Q8N3P4 1428 aa7.83□□□□□ -1.16
MACF1-210ENST00000462496 DNMBPQ6XZF7 1577 aa7.83□□□□□ -1.16
MACF1-210ENST00000462496 LAMC3Q9Y6N6 1575 aa7.83□□□□□ -1.16
MACF1-210ENST00000462496 FGD5Q6ZNL6 1462 aa7.82□□□□□ -1.16
MACF1-210ENST00000462496 PPARGC1BQ86YN6 1023 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms