RNA–Protein interactions for RNA: ENST00000422234.2

MACF1-206, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-206ENST00000422234 NISCHQ9Y2I1 1504 aa18.04■□□□□ 0.48
MACF1-206ENST00000422234 CCDC180Q9P1Z9 1646 aa15.92■□□□□ 0.14
MACF1-206ENST00000422234 ABCC9O60706 1549 aa15.36■□□□□ 0.05
MACF1-206ENST00000422234 ZCCHC6Q5VYS8 1495 aaKnown RBP15.09■□□□□ 0.01
MACF1-206ENST00000422234 DCAF8L2P0C7V8 631 aa14.99□□□□□ -0.01
MACF1-206ENST00000422234 DCAF1Q9Y4B6 1507 aa14.93□□□□□ -0.02
MACF1-206ENST00000422234 NACADO15069 1562 aa14.91□□□□□ -0.02
MACF1-206ENST00000422234 MYO15BQ96JP2 1530 aa14.9□□□□□ -0.02
MACF1-206ENST00000422234 RB1CC1Q8TDY2 1594 aa14.87□□□□□ -0.03
MACF1-206ENST00000422234 SCRIBQ14160 1630 aa14.58□□□□□ -0.08
MACF1-206ENST00000422234 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.08
MACF1-206ENST00000422234 SHROOM4Q9ULL8 1493 aa14.44□□□□□ -0.1
MACF1-206ENST00000422234 BICRAQ9NZM4 1560 aa14.4□□□□□ -0.1
MACF1-206ENST00000422234 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
MACF1-206ENST00000422234 CECR2Q9BXF3 1484 aa14.03□□□□□ -0.16
MACF1-206ENST00000422234 EIF4G1Q04637 1599 aaKnown RBP14.01□□□□□ -0.17
MACF1-206ENST00000422234 BAZ1AQ9NRL2 1556 aaPredicted RBP13.96□□□□□ -0.17
MACF1-206ENST00000422234 SMARCA4P51532 1647 aa13.95□□□□□ -0.18
MACF1-206ENST00000422234 MROH2BQ7Z745 1585 aa13.92□□□□□ -0.18
MACF1-206ENST00000422234 CC2D2AQ9P2K1 1620 aa13.89□□□□□ -0.19
MACF1-206ENST00000422234 RSF1Q96T23 1441 aaPredicted RBP13.85□□□□□ -0.19
MACF1-206ENST00000422234 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
MACF1-206ENST00000422234 ATAD2BQ9ULI0 1458 aa13.81□□□□□ -0.2
MACF1-206ENST00000422234 SMARCA2P51531 1590 aa13.81□□□□□ -0.2
MACF1-206ENST00000422234 PEG3Q9GZU2 1588 aa13.79□□□□□ -0.2
MACF1-206ENST00000422234 WIZO95785 1651 aa13.78□□□□□ -0.2
MACF1-206ENST00000422234 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
MACF1-206ENST00000422234 BAZ1BQ9UIG0 1483 aaKnown RBP13.73□□□□□ -0.21
MACF1-206ENST00000422234 SUPT5HO00267 1087 aaKnown RBP13.72□□□□□ -0.21
MACF1-206ENST00000422234 HMGXB3Q12766 1538 aa13.72□□□□□ -0.21
MACF1-206ENST00000422234 TOP2AP11388 1531 aaKnown RBP13.66□□□□□ -0.22
MACF1-206ENST00000422234 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
MACF1-206ENST00000422234 CADPSQ9ULU8 1353 aa13.38□□□□□ -0.27
MACF1-206ENST00000422234 NESP48681 1621 aa13.36□□□□□ -0.27
MACF1-206ENST00000422234 LAMC3Q9Y6N6 1575 aa13.35□□□□□ -0.27
MACF1-206ENST00000422234 CFTRP13569 1480 aa13.35□□□□□ -0.27
MACF1-206ENST00000422234 AEBP2Q6ZN18 517 aaPredicted RBP13.32□□□□□ -0.28
MACF1-206ENST00000422234 PDS5BQ9NTI5 1447 aa13.27□□□□□ -0.29
MACF1-206ENST00000422234 PRDM2Q13029 1718 aa13.27□□□□□ -0.29
MACF1-206ENST00000422234 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
MACF1-206ENST00000422234 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
MACF1-206ENST00000422234 KIF21AQ7Z4S6 1674 aa13.21□□□□□ -0.3
MACF1-206ENST00000422234 CEP164Q9UPV0 1460 aa13.19□□□□□ -0.3
MACF1-206ENST00000422234 MRC2Q9UBG0 1479 aa13.12□□□□□ -0.31
MACF1-206ENST00000422234 THOC2Q8NI27 1593 aaKnown RBP13.1□□□□□ -0.31
MACF1-206ENST00000422234 URB2Q14146 1524 aaKnown RBP13.08□□□□□ -0.31
MACF1-206ENST00000422234 ABCC8Q09428 1581 aa13.08□□□□□ -0.32
MACF1-206ENST00000422234 WDR62O43379 1518 aa13.06□□□□□ -0.32
MACF1-206ENST00000422234 DNMBPQ6XZF7 1577 aa13.06□□□□□ -0.32
MACF1-206ENST00000422234 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
MACF1-206ENST00000422234 CUX1P39880 1505 aa13.05□□□□□ -0.32
MACF1-206ENST00000422234 TOPBP1Q92547 1522 aa13.05□□□□□ -0.32
MACF1-206ENST00000422234 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
MACF1-206ENST00000422234 TOP2BQ02880 1626 aa12.99□□□□□ -0.33
MACF1-206ENST00000422234 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
MACF1-206ENST00000422234 CUX2O14529 1486 aa12.97□□□□□ -0.33
MACF1-206ENST00000422234 POLA1P09884 1462 aaPredicted RBP12.96□□□□□ -0.34
MACF1-206ENST00000422234 FGD5Q6ZNL6 1462 aa12.96□□□□□ -0.34
MACF1-206ENST00000422234 CHIC1Q5VXU3 224 aa12.94□□□□□ -0.34
MACF1-206ENST00000422234 TRIM41Q8WV44 630 aa12.93□□□□□ -0.34
MACF1-206ENST00000422234 IFT140Q96RY7 1462 aa12.91□□□□□ -0.34
MACF1-206ENST00000422234 SOGA1O94964 1423 aa12.9□□□□□ -0.34
MACF1-206ENST00000422234 RAD54L2Q9Y4B4 1467 aa12.9□□□□□ -0.34
MACF1-206ENST00000422234 TARBP1Q13395 1621 aaKnown RBP12.87□□□□□ -0.35
MACF1-206ENST00000422234 ABCA10Q8WWZ4 1543 aa12.85□□□□□ -0.35
MACF1-206ENST00000422234 WDR97A6NE52 1622 aa12.83□□□□□ -0.36
MACF1-206ENST00000422234 ZNF608Q9ULD9 1512 aaPredicted RBP12.83□□□□□ -0.36
MACF1-206ENST00000422234 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
MACF1-206ENST00000422234 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.361e-6■■■■□ 20.3
MACF1-206ENST00000422234 EIF4G3O43432 1585 aaKnown RBP12.78□□□□□ -0.36
MACF1-206ENST00000422234 KIF27Q86VH2 1401 aa12.77□□□□□ -0.37
MACF1-206ENST00000422234 ABCA5Q8WWZ7 1642 aa12.77□□□□□ -0.37
MACF1-206ENST00000422234 GAPVD1Q14C86 1478 aa12.76□□□□□ -0.37
MACF1-206ENST00000422234 GRIN2BQ13224 1484 aa12.72□□□□□ -0.37
MACF1-206ENST00000422234 RUSC2Q8N2Y8 1516 aa12.72□□□□□ -0.37
MACF1-206ENST00000422234 PBRM1Q86U86 1689 aa12.71□□□□□ -0.37
MACF1-206ENST00000422234 ERICH3Q5RHP9 1530 aa12.69□□□□□ -0.38
MACF1-206ENST00000422234 SNAPC4Q5SXM2 1469 aa12.69□□□□□ -0.38
MACF1-206ENST00000422234 EEA1Q15075 1411 aa12.69□□□□□ -0.38
MACF1-206ENST00000422234 IGF1RP08069 1367 aa12.68□□□□□ -0.38
MACF1-206ENST00000422234 FAM9AQ8IZU1 332 aaPredicted RBP12.67□□□□□ -0.38
MACF1-206ENST00000422234 MAGI1Q96QZ7 1491 aaPredicted RBP12.66□□□□□ -0.38
MACF1-206ENST00000422234 ADAMTS12P58397 1594 aa12.64□□□□□ -0.39
MACF1-206ENST00000422234 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
MACF1-206ENST00000422234 CUL7Q14999 1698 aa12.63□□□□□ -0.39
MACF1-206ENST00000422234 FHAD1B1AJZ9 1412 aa12.62□□□□□ -0.39
MACF1-206ENST00000422234 SYNJ2O15056 1496 aa12.61□□□□□ -0.39
MACF1-206ENST00000422234 CARMIL1Q5VZK9 1371 aa12.61□□□□□ -0.39
MACF1-206ENST00000422234 FBLN2P98095 1184 aa12.6□□□□□ -0.39
MACF1-206ENST00000422234 CHMP7Q8WUX9 453 aaPredicted RBP12.59□□□□□ -0.39
MACF1-206ENST00000422234 PRXQ9BXM0 1461 aa12.58□□□□□ -0.4
MACF1-206ENST00000422234 RAPGEF2Q9Y4G8 1499 aa12.57□□□□□ -0.4
MACF1-206ENST00000422234 CHD1O14646 1710 aa12.57□□□□□ -0.4
MACF1-206ENST00000422234 GRIN2AQ12879 1464 aa12.56□□□□□ -0.4
MACF1-206ENST00000422234 KIF21BO75037 1637 aa12.54□□□□□ -0.4
MACF1-206ENST00000422234 EHMT2Q96KQ7 1210 aa12.5□□□□□ -0.41
MACF1-206ENST00000422234 GOLGA3Q08378 1498 aa12.5□□□□□ -0.41
MACF1-206ENST00000422234 CEP170Q5SW79 1584 aa12.49□□□□□ -0.41
MACF1-206ENST00000422234 NUP160Q12769 1436 aa12.49□□□□□ -0.41
MACF1-206ENST00000422234 OSCARQ8IYS5 282 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms