RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 NISCHQ9Y2I1 1504 aa28.53■■■□□ 2.16
FANCA-231ENST00000568626 CCDC180Q9P1Z9 1646 aa25.29■■□□□ 1.64
FANCA-231ENST00000568626 ABCC9O60706 1549 aa24.23■■□□□ 1.47
FANCA-231ENST00000568626 ZCCHC6Q5VYS8 1495 aaKnown RBP23.87■■□□□ 1.41
FANCA-231ENST00000568626 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
FANCA-231ENST00000568626 MYO15BQ96JP2 1530 aa23.67■■□□□ 1.38
FANCA-231ENST00000568626 NACADO15069 1562 aa23.65■■□□□ 1.38
FANCA-231ENST00000568626 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
FANCA-231ENST00000568626 DCAF8L2P0C7V8 631 aa23.53■■□□□ 1.36
FANCA-231ENST00000568626 UNC13AQ9UPW8 1703 aa23.01■■□□□ 1.27
FANCA-231ENST00000568626 SCRIBQ14160 1630 aa23■■□□□ 1.27
FANCA-231ENST00000568626 DNAJC5BQ9UF47 199 aa22.82■■□□□ 1.24
FANCA-231ENST00000568626 BICRAQ9NZM4 1560 aa22.79■■□□□ 1.24
FANCA-231ENST00000568626 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
FANCA-231ENST00000568626 PABPN1Q86U42 306 aaKnown RBP eCLIP22.63■■□□□ 1.219e-8■■■■□ 22.1
FANCA-231ENST00000568626 EIF4G1Q04637 1599 aaKnown RBP22.19■■□□□ 1.14
FANCA-231ENST00000568626 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
FANCA-231ENST00000568626 CECR2Q9BXF3 1484 aa22.1■■□□□ 1.13
FANCA-231ENST00000568626 SMARCA4P51532 1647 aa22.08■■□□□ 1.13
FANCA-231ENST00000568626 CC2D2AQ9P2K1 1620 aa21.98■■□□□ 1.11
FANCA-231ENST00000568626 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.1
FANCA-231ENST00000568626 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.09
FANCA-231ENST00000568626 SMARCA2P51531 1590 aa21.88■■□□□ 1.09
FANCA-231ENST00000568626 RSF1Q96T23 1441 aaPredicted RBP21.84■■□□□ 1.09
FANCA-231ENST00000568626 ATAD2BQ9ULI0 1458 aa21.83■■□□□ 1.08
FANCA-231ENST00000568626 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
FANCA-231ENST00000568626 HMGXB3Q12766 1538 aa21.75■■□□□ 1.07
FANCA-231ENST00000568626 WIZO95785 1651 aa21.74■■□□□ 1.07
FANCA-231ENST00000568626 BAZ1BQ9UIG0 1483 aaKnown RBP21.7■■□□□ 1.06
FANCA-231ENST00000568626 TOP2AP11388 1531 aaKnown RBP21.6■■□□□ 1.05
FANCA-231ENST00000568626 SUPT5HO00267 1087 aaKnown RBP21.48■■□□□ 1.03
FANCA-231ENST00000568626 CCDC88BA6NC98 1476 aa21.27■■□□□ 1
FANCA-231ENST00000568626 LAMC3Q9Y6N6 1575 aa21.19■□□□□ 0.98
FANCA-231ENST00000568626 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
FANCA-231ENST00000568626 CFTRP13569 1480 aa21.12■□□□□ 0.97
FANCA-231ENST00000568626 PRDM2Q13029 1718 aa21.07■□□□□ 0.96
FANCA-231ENST00000568626 NESP48681 1621 aa21.06■□□□□ 0.96
FANCA-231ENST00000568626 DNAJC5Q9H3Z4 198 aa21.05■□□□□ 0.96
FANCA-231ENST00000568626 PDS5BQ9NTI5 1447 aa21■□□□□ 0.95
FANCA-231ENST00000568626 ERCC6Q03468 1493 aa20.9■□□□□ 0.94
FANCA-231ENST00000568626 FANCD2Q9BXW9 1451 aa20.9■□□□□ 0.94
FANCA-231ENST00000568626 KIF21AQ7Z4S6 1674 aa20.89■□□□□ 0.94
FANCA-231ENST00000568626 CEP164Q9UPV0 1460 aa20.87■□□□□ 0.93
FANCA-231ENST00000568626 CUX2O14529 1486 aa20.81■□□□□ 0.92
FANCA-231ENST00000568626 MRC2Q9UBG0 1479 aa20.76■□□□□ 0.91
FANCA-231ENST00000568626 THOC2Q8NI27 1593 aaKnown RBP20.76■□□□□ 0.91
FANCA-231ENST00000568626 WDR62O43379 1518 aa20.7■□□□□ 0.9
FANCA-231ENST00000568626 ABCC8Q09428 1581 aa20.69■□□□□ 0.9
FANCA-231ENST00000568626 DNMBPQ6XZF7 1577 aa20.67■□□□□ 0.9
FANCA-231ENST00000568626 URB2Q14146 1524 aaKnown RBP20.65■□□□□ 0.9
FANCA-231ENST00000568626 TOPBP1Q92547 1522 aa20.62■□□□□ 0.89
FANCA-231ENST00000568626 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
FANCA-231ENST00000568626 CUX1P39880 1505 aa20.58■□□□□ 0.89
FANCA-231ENST00000568626 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
FANCA-231ENST00000568626 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
FANCA-231ENST00000568626 SYNJ1O43426 1573 aa20.54■□□□□ 0.88
FANCA-231ENST00000568626 POLA1P09884 1462 aaPredicted RBP20.47■□□□□ 0.87
FANCA-231ENST00000568626 FGD5Q6ZNL6 1462 aa20.47■□□□□ 0.87
FANCA-231ENST00000568626 IFT140Q96RY7 1462 aa20.42■□□□□ 0.86
FANCA-231ENST00000568626 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
FANCA-231ENST00000568626 SOGA1O94964 1423 aa20.36■□□□□ 0.85
FANCA-231ENST00000568626 WDR97A6NE52 1622 aa20.34■□□□□ 0.85
FANCA-231ENST00000568626 TRIM41Q8WV44 630 aa20.33■□□□□ 0.85
FANCA-231ENST00000568626 ABCA10Q8WWZ4 1543 aa20.32■□□□□ 0.84
FANCA-231ENST00000568626 RAD54L2Q9Y4B4 1467 aa20.31■□□□□ 0.84
FANCA-231ENST00000568626 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
FANCA-231ENST00000568626 EIF4G3O43432 1585 aaKnown RBP20.24■□□□□ 0.83
FANCA-231ENST00000568626 ABCA5Q8WWZ7 1642 aa20.22■□□□□ 0.83
FANCA-231ENST00000568626 ZNF608Q9ULD9 1512 aaPredicted RBP20.22■□□□□ 0.83
FANCA-231ENST00000568626 KIF27Q86VH2 1401 aa20.18■□□□□ 0.82
FANCA-231ENST00000568626 TDRD9Q8NDG6 1382 aaKnown RBP20.16■□□□□ 0.82
FANCA-231ENST00000568626 GAPVD1Q14C86 1478 aa20.16■□□□□ 0.82
FANCA-231ENST00000568626 AQRO60306 1485 aaKnown RBP eCLIP20.14■□□□□ 0.811e-7■■■■■ 32.3
FANCA-231ENST00000568626 PBRM1Q86U86 1689 aa20.13■□□□□ 0.81
FANCA-231ENST00000568626 GRIN2BQ13224 1484 aa20.12■□□□□ 0.81
FANCA-231ENST00000568626 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
FANCA-231ENST00000568626 EEA1Q15075 1411 aa20.08■□□□□ 0.8
FANCA-231ENST00000568626 MAGI1Q96QZ7 1491 aaPredicted RBP20.05■□□□□ 0.8
FANCA-231ENST00000568626 SNAPC4Q5SXM2 1469 aa20.02■□□□□ 0.8
FANCA-231ENST00000568626 CUL7Q14999 1698 aa20.02■□□□□ 0.8
FANCA-231ENST00000568626 ADAMTS12P58397 1594 aa20■□□□□ 0.79
FANCA-231ENST00000568626 RUSC2Q8N2Y8 1516 aa19.99■□□□□ 0.79
FANCA-231ENST00000568626 IGF1RP08069 1367 aa19.96■□□□□ 0.79
FANCA-231ENST00000568626 FHAD1B1AJZ9 1412 aa19.95■□□□□ 0.78
FANCA-231ENST00000568626 SYNJ2O15056 1496 aa19.95■□□□□ 0.78
FANCA-231ENST00000568626 OSCARQ8IYS5 282 aa19.9■□□□□ 0.78
FANCA-231ENST00000568626 CHD1O14646 1710 aa19.89■□□□□ 0.77
FANCA-231ENST00000568626 CARMIL1Q5VZK9 1371 aa19.88■□□□□ 0.77
FANCA-231ENST00000568626 CSRNP3Q8WYN3 585 aa19.88■□□□□ 0.77
FANCA-231ENST00000568626 GRIN2AQ12879 1464 aa19.86■□□□□ 0.77
FANCA-231ENST00000568626 PRXQ9BXM0 1461 aa19.86■□□□□ 0.77
FANCA-231ENST00000568626 CHMP7Q8WUX9 453 aaPredicted RBP19.84■□□□□ 0.77
FANCA-231ENST00000568626 RAPGEF2Q9Y4G8 1499 aa19.84■□□□□ 0.77
FANCA-231ENST00000568626 KIF21BO75037 1637 aa19.84■□□□□ 0.77
FANCA-231ENST00000568626 FAM9AQ8IZU1 332 aaPredicted RBP19.82■□□□□ 0.76
FANCA-231ENST00000568626 FBLN2P98095 1184 aa19.79■□□□□ 0.76
FANCA-231ENST00000568626 NUP160Q12769 1436 aa19.76■□□□□ 0.75
FANCA-231ENST00000568626 CEP170Q5SW79 1584 aa19.73■□□□□ 0.75
FANCA-231ENST00000568626 GOLGA3Q08378 1498 aa19.73■□□□□ 0.75
FANCA-231ENST00000568626 CLASP1Q7Z460 1538 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms