Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
CDC42BPAQ5VT25 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC34.78■■■■□ 3.16
CDC42BPAQ5VT25 AC126544.1-201ENST00000580842 1059 ntBASIC34.78■■■■□ 3.16
CDC42BPAQ5VT25 RAB43-208ENST00000615093 783 ntTSL 5 BASIC34.78■■■■□ 3.16
CDC42BPAQ5VT25 GLI3-203ENST00000437480 451 ntTSL 2 BASIC34.77■■■■□ 3.16
CDC42BPAQ5VT25 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC34.76■■■■□ 3.16
CDC42BPAQ5VT25 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC34.76■■■■□ 3.16
CDC42BPAQ5VT25 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
CDC42BPAQ5VT25 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
CDC42BPAQ5VT25 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
CDC42BPAQ5VT25 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC34.76■■■■□ 3.15
CDC42BPAQ5VT25 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CDC42BPAQ5VT25 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC34.75■■■■□ 3.15
CDC42BPAQ5VT25 ALDH1A3-203ENST00000557963 1670 ntBASIC34.75■■■■□ 3.15
CDC42BPAQ5VT25 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC34.75■■■■□ 3.15
CDC42BPAQ5VT25 AICDA-202ENST00000537228 667 ntTSL 5 BASIC34.75■■■■□ 3.15
CDC42BPAQ5VT25 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
CDC42BPAQ5VT25 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CDC42BPAQ5VT25 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC34.74■■■■□ 3.15
CDC42BPAQ5VT25 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
CDC42BPAQ5VT25 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC34.74■■■■□ 3.15
CDC42BPAQ5VT25 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC34.74■■■■□ 3.15
CDC42BPAQ5VT25 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC34.74■■■■□ 3.15
CDC42BPAQ5VT25 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC34.74■■■■□ 3.15
CDC42BPAQ5VT25 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC34.73■■■■□ 3.15
CDC42BPAQ5VT25 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
CDC42BPAQ5VT25 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
CDC42BPAQ5VT25 RARRES2P11-201ENST00000635158 484 ntBASIC34.73■■■■□ 3.15
CDC42BPAQ5VT25 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC34.73■■■■□ 3.15
CDC42BPAQ5VT25 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC34.72■■■■□ 3.15
CDC42BPAQ5VT25 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CDC42BPAQ5VT25 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CDC42BPAQ5VT25 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CDC42BPAQ5VT25 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CDC42BPAQ5VT25 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CDC42BPAQ5VT25 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC34.72■■■■□ 3.15
CDC42BPAQ5VT25 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC34.72■■■■□ 3.15
CDC42BPAQ5VT25 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC34.72■■■■□ 3.15
CDC42BPAQ5VT25 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC34.72■■■■□ 3.15
CDC42BPAQ5VT25 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CDC42BPAQ5VT25 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC34.72■■■■□ 3.15
CDC42BPAQ5VT25 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC34.71■■■■□ 3.15
CDC42BPAQ5VT25 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC34.71■■■■□ 3.15
CDC42BPAQ5VT25 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC34.71■■■■□ 3.15
CDC42BPAQ5VT25 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC34.71■■■■□ 3.15
CDC42BPAQ5VT25 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC34.71■■■■□ 3.15
CDC42BPAQ5VT25 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CDC42BPAQ5VT25 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC34.7■■■■□ 3.15
CDC42BPAQ5VT25 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC34.69■■■■□ 3.14
CDC42BPAQ5VT25 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CDC42BPAQ5VT25 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CDC42BPAQ5VT25 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC34.69■■■■□ 3.14
CDC42BPAQ5VT25 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC34.69■■■■□ 3.14
CDC42BPAQ5VT25 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
CDC42BPAQ5VT25 AC010525.1-201ENST00000585559 441 ntBASIC34.69■■■■□ 3.14
CDC42BPAQ5VT25 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC34.69■■■■□ 3.14
CDC42BPAQ5VT25 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC34.69■■■■□ 3.14
CDC42BPAQ5VT25 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC34.68■■■■□ 3.14
CDC42BPAQ5VT25 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CDC42BPAQ5VT25 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC34.68■■■■□ 3.14
CDC42BPAQ5VT25 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC34.68■■■■□ 3.14
CDC42BPAQ5VT25 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC34.68■■■■□ 3.14
CDC42BPAQ5VT25 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
CDC42BPAQ5VT25 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC34.68■■■■□ 3.14
CDC42BPAQ5VT25 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
CDC42BPAQ5VT25 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC34.67■■■■□ 3.14
CDC42BPAQ5VT25 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC34.67■■■■□ 3.14
CDC42BPAQ5VT25 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC34.67■■■■□ 3.14
CDC42BPAQ5VT25 AC141586.4-201ENST00000624558 1573 ntBASIC34.67■■■■□ 3.14
CDC42BPAQ5VT25 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC34.67■■■■□ 3.14
CDC42BPAQ5VT25 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
CDC42BPAQ5VT25 MIR572-201ENST00000384983 95 ntBASIC34.67■■■■□ 3.14
CDC42BPAQ5VT25 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC34.67■■■■□ 3.14
CDC42BPAQ5VT25 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC34.67■■■■□ 3.14
CDC42BPAQ5VT25 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CDC42BPAQ5VT25 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC34.66■■■■□ 3.14
CDC42BPAQ5VT25 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
CDC42BPAQ5VT25 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CDC42BPAQ5VT25 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
CDC42BPAQ5VT25 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CDC42BPAQ5VT25 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC34.65■■■■□ 3.14
CDC42BPAQ5VT25 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
CDC42BPAQ5VT25 AC022517.1-201ENST00000592429 346 ntBASIC34.65■■■■□ 3.14
CDC42BPAQ5VT25 AL358852.1-201ENST00000623174 1268 ntBASIC34.65■■■■□ 3.14
CDC42BPAQ5VT25 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
CDC42BPAQ5VT25 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC34.65■■■■□ 3.14
CDC42BPAQ5VT25 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC34.65■■■■□ 3.14
CDC42BPAQ5VT25 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC34.64■■■■□ 3.14
CDC42BPAQ5VT25 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CDC42BPAQ5VT25 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC34.64■■■■□ 3.14
CDC42BPAQ5VT25 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC34.64■■■■□ 3.14
CDC42BPAQ5VT25 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CDC42BPAQ5VT25 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC34.64■■■■□ 3.14
CDC42BPAQ5VT25 MIR6084-201ENST00000622012 110 ntBASIC34.64■■■■□ 3.14
CDC42BPAQ5VT25 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC34.64■■■■□ 3.14
CDC42BPAQ5VT25 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC34.63■■■■□ 3.13
CDC42BPAQ5VT25 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC34.63■■■■□ 3.13
CDC42BPAQ5VT25 AC123595.1-201ENST00000440769 1046 ntBASIC34.63■■■■□ 3.13
CDC42BPAQ5VT25 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC34.63■■■■□ 3.13
CDC42BPAQ5VT25 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC34.63■■■■□ 3.13
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms