RNA–Protein interactions for RNA: ENST00000416889.6

SPG21-202, Transcript of SPG21, maspardin, humanhuman

TSL 2 BASIC

Gene SPG21, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-202ENST00000416889 NISCHQ9Y2I1 1504 aa53.07■■■■■ 6.09
SPG21-202ENST00000416889 CCDC180Q9P1Z9 1646 aa46.77■■■■■ 5.08
SPG21-202ENST00000416889 ABCC9O60706 1549 aa44.87■■■■■ 4.77
SPG21-202ENST00000416889 ZCCHC6Q5VYS8 1495 aaKnown RBP44.42■■■■■ 4.7
SPG21-202ENST00000416889 DCAF8L2P0C7V8 631 aa44.02■■■■■ 4.64
SPG21-202ENST00000416889 DCAF1Q9Y4B6 1507 aa43.93■■■■■ 4.62
SPG21-202ENST00000416889 MYO15BQ96JP2 1530 aa43.74■■■■■ 4.59
SPG21-202ENST00000416889 NACADO15069 1562 aa43.74■■■■■ 4.59
SPG21-202ENST00000416889 RB1CC1Q8TDY2 1594 aa43.57■■■■■ 4.56
SPG21-202ENST00000416889 SCRIBQ14160 1630 aa42.79■■■■■ 4.44
SPG21-202ENST00000416889 UNC13AQ9UPW8 1703 aa42.59■■■■■ 4.41
SPG21-202ENST00000416889 SHROOM4Q9ULL8 1493 aa42.59■■■■■ 4.41
SPG21-202ENST00000416889 BICRAQ9NZM4 1560 aa42.19■■■■■ 4.34
SPG21-202ENST00000416889 PABPN1Q86U42 306 aaKnown RBP eCLIP42.09■■■■■ 4.33
SPG21-202ENST00000416889 CECR2Q9BXF3 1484 aa41.24■■■■■ 4.19
SPG21-202ENST00000416889 BAZ1AQ9NRL2 1556 aaPredicted RBP41.08■■■■■ 4.17
SPG21-202ENST00000416889 EIF4G1Q04637 1599 aaKnown RBP41.02■■■■■ 4.16
SPG21-202ENST00000416889 SMARCA4P51532 1647 aa40.99■■■■■ 4.15
SPG21-202ENST00000416889 MROH2BQ7Z745 1585 aa40.93■■■■■ 4.14
SPG21-202ENST00000416889 RSF1Q96T23 1441 aaPredicted RBP40.8■■■■■ 4.12
SPG21-202ENST00000416889 CC2D2AQ9P2K1 1620 aa40.62■■■■■ 4.09
SPG21-202ENST00000416889 SUPT5HO00267 1087 aaKnown RBP40.56■■■■■ 4.08
SPG21-202ENST00000416889 WIZO95785 1651 aa40.55■■■■■ 4.08
SPG21-202ENST00000416889 PEG3Q9GZU2 1588 aa40.54■■■■■ 4.08
SPG21-202ENST00000416889 SMARCA2P51531 1590 aa40.53■■■■■ 4.08
SPG21-202ENST00000416889 ATAD2BQ9ULI0 1458 aa40.51■■■■■ 4.08
SPG21-202ENST00000416889 NCAPD3P42695 1498 aa40.32■■■■■ 4.05
SPG21-202ENST00000416889 BAZ1BQ9UIG0 1483 aaKnown RBP40.26■■■■■ 4.04
SPG21-202ENST00000416889 DNAJC5BQ9UF47 199 aa40.26■■■■■ 4.03
SPG21-202ENST00000416889 HMGXB3Q12766 1538 aa40.23■■■■■ 4.03
SPG21-202ENST00000416889 TOP2AP11388 1531 aaKnown RBP40.17■■■■■ 4.02
SPG21-202ENST00000416889 CCDC88BA6NC98 1476 aa39.68■■■■□ 3.94
SPG21-202ENST00000416889 CADPSQ9ULU8 1353 aa39.22■■■■□ 3.87
SPG21-202ENST00000416889 CFTRP13569 1480 aa39.18■■■■□ 3.86
SPG21-202ENST00000416889 LAMC3Q9Y6N6 1575 aa39.14■■■■□ 3.86
SPG21-202ENST00000416889 NESP48681 1621 aa39.1■■■■□ 3.85
SPG21-202ENST00000416889 PRDM2Q13029 1718 aa39.01■■■■□ 3.83
SPG21-202ENST00000416889 PDS5BQ9NTI5 1447 aa38.85■■■■□ 3.81
SPG21-202ENST00000416889 FANCD2Q9BXW9 1451 aa38.79■■■■□ 3.8
SPG21-202ENST00000416889 KIF21AQ7Z4S6 1674 aa38.68■■■■□ 3.78
SPG21-202ENST00000416889 CEP164Q9UPV0 1460 aa38.66■■■■□ 3.78
SPG21-202ENST00000416889 ERCC6Q03468 1493 aa38.62■■■■□ 3.77
SPG21-202ENST00000416889 ABCC8Q09428 1581 aa38.56■■■■□ 3.76
SPG21-202ENST00000416889 WRNQ14191 1432 aaPredicted RBP eCLIP38.47■■■■□ 3.75
SPG21-202ENST00000416889 MRC2Q9UBG0 1479 aa38.4■■■■□ 3.74
SPG21-202ENST00000416889 CHIC1Q5VXU3 224 aa38.38■■■■□ 3.73
SPG21-202ENST00000416889 CUX1P39880 1505 aa38.35■■■■□ 3.73
SPG21-202ENST00000416889 URB2Q14146 1524 aaKnown RBP38.33■■■■□ 3.73
SPG21-202ENST00000416889 SYNJ1O43426 1573 aa38.32■■■■□ 3.73
SPG21-202ENST00000416889 DNMBPQ6XZF7 1577 aa38.32■■■■□ 3.73
SPG21-202ENST00000416889 THOC2Q8NI27 1593 aaKnown RBP38.29■■■■□ 3.72
SPG21-202ENST00000416889 TOPBP1Q92547 1522 aa38.28■■■■□ 3.72
SPG21-202ENST00000416889 TOP2BQ02880 1626 aa38.27■■■■□ 3.72
SPG21-202ENST00000416889 BIVM-ERCC5R4GMW8 1640 aa38.26■■■■□ 3.71
SPG21-202ENST00000416889 TRIM41Q8WV44 630 aa38.24■■■■□ 3.71
SPG21-202ENST00000416889 WDR62O43379 1518 aa38.22■■■■□ 3.71
SPG21-202ENST00000416889 FGD5Q6ZNL6 1462 aa38.08■■■■□ 3.69
SPG21-202ENST00000416889 POLA1P09884 1462 aaPredicted RBP38.01■■■■□ 3.68
SPG21-202ENST00000416889 SOGA1O94964 1423 aa37.88■■■■□ 3.65
SPG21-202ENST00000416889 CUX2O14529 1486 aa37.86■■■■□ 3.65
SPG21-202ENST00000416889 RAD54L2Q9Y4B4 1467 aa37.85■■■■□ 3.65
SPG21-202ENST00000416889 IFT140Q96RY7 1462 aa37.8■■■■□ 3.64
SPG21-202ENST00000416889 TARBP1Q13395 1621 aaKnown RBP37.77■■■■□ 3.64
SPG21-202ENST00000416889 ABCA10Q8WWZ4 1543 aa37.73■■■■□ 3.63
SPG21-202ENST00000416889 WDR97A6NE52 1622 aa37.71■■■■□ 3.63
SPG21-202ENST00000416889 KIF27Q86VH2 1401 aa37.59■■■■□ 3.61
SPG21-202ENST00000416889 TDRD9Q8NDG6 1382 aaKnown RBP37.55■■■■□ 3.6
SPG21-202ENST00000416889 ZNF608Q9ULD9 1512 aaPredicted RBP37.54■■■■□ 3.6
SPG21-202ENST00000416889 RUSC2Q8N2Y8 1516 aa37.54■■■■□ 3.6
SPG21-202ENST00000416889 EEA1Q15075 1411 aa37.51■■■■□ 3.59
SPG21-202ENST00000416889 ABCA5Q8WWZ7 1642 aa37.5■■■■□ 3.59
SPG21-202ENST00000416889 GAPVD1Q14C86 1478 aa37.46■■■■□ 3.59
SPG21-202ENST00000416889 EIF4G3O43432 1585 aaKnown RBP37.46■■■■□ 3.59
SPG21-202ENST00000416889 AQRO60306 1485 aaKnown RBP eCLIP37.46■■■■□ 3.59
SPG21-202ENST00000416889 FAM9AQ8IZU1 332 aaPredicted RBP37.46■■■■□ 3.59
SPG21-202ENST00000416889 PBRM1Q86U86 1689 aa37.34■■■■□ 3.57
SPG21-202ENST00000416889 GRIN2BQ13224 1484 aa37.32■■■■□ 3.56
SPG21-202ENST00000416889 CSRNP3Q8WYN3 585 aa37.31■■■■□ 3.56
SPG21-202ENST00000416889 ERICH3Q5RHP9 1530 aa37.31■■■■□ 3.56
SPG21-202ENST00000416889 IGF1RP08069 1367 aa37.28■■■■□ 3.56
SPG21-202ENST00000416889 CUL7Q14999 1698 aa37.17■■■■□ 3.54
SPG21-202ENST00000416889 SNAPC4Q5SXM2 1469 aa37.15■■■■□ 3.54
SPG21-202ENST00000416889 MAGI1Q96QZ7 1491 aaPredicted RBP37.12■■■■□ 3.53
SPG21-202ENST00000416889 CARMIL1Q5VZK9 1371 aa37.11■■■■□ 3.53
SPG21-202ENST00000416889 ADAMTS12P58397 1594 aa37.09■■■■□ 3.53
SPG21-202ENST00000416889 PRXQ9BXM0 1461 aa37.09■■■■□ 3.53
SPG21-202ENST00000416889 FHAD1B1AJZ9 1412 aa37.06■■■■□ 3.52
SPG21-202ENST00000416889 KIF21BO75037 1637 aa37.05■■■■□ 3.52
SPG21-202ENST00000416889 RAPGEF2Q9Y4G8 1499 aa37■■■■□ 3.51
SPG21-202ENST00000416889 SYNJ2O15056 1496 aa36.96■■■■□ 3.51
SPG21-202ENST00000416889 GOLGA3Q08378 1498 aa36.93■■■■□ 3.5
SPG21-202ENST00000416889 EHMT2Q96KQ7 1210 aa36.92■■■■□ 3.5
SPG21-202ENST00000416889 CHMP7Q8WUX9 453 aaPredicted RBP36.9■■■■□ 3.5
SPG21-202ENST00000416889 FBLN2P98095 1184 aa36.86■■■■□ 3.49
SPG21-202ENST00000416889 GRIN2AQ12879 1464 aa36.84■■■■□ 3.49
SPG21-202ENST00000416889 LOC105371045A0A1W2PR82 267 aa36.82■■■■□ 3.48
SPG21-202ENST00000416889 CHD1O14646 1710 aa36.81■■■■□ 3.48
SPG21-202ENST00000416889 UBTFP17480 764 aaKnown RBP36.76■■■■□ 3.48
SPG21-202ENST00000416889 CTTNBP2Q8WZ74 1663 aa36.63■■■■□ 3.45
SPG21-202ENST00000416889 NUP160Q12769 1436 aa36.63■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms