Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNAP47Q5SQN1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNAP47Q5SQN1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SNAP47Q5SQN1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNAP47Q5SQN1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.86■■□□□ 1.09
SNAP47Q5SQN1 SERBP1P1-201ENST00000396021 1160 ntBASIC21.86■■□□□ 1.09
SNAP47Q5SQN1 SUDS3P1-201ENST00000505831 966 ntBASIC21.86■■□□□ 1.09
SNAP47Q5SQN1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SNAP47Q5SQN1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SNAP47Q5SQN1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SNAP47Q5SQN1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 AF213884.3-201ENST00000563833 479 ntBASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.85■■□□□ 1.09
SNAP47Q5SQN1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNAP47Q5SQN1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.84■■□□□ 1.09
SNAP47Q5SQN1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.84■■□□□ 1.09
SNAP47Q5SQN1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNAP47Q5SQN1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNAP47Q5SQN1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.84■■□□□ 1.09
SNAP47Q5SQN1 MIR4767-201ENST00000582827 78 ntBASIC21.84■■□□□ 1.09
SNAP47Q5SQN1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SNAP47Q5SQN1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SNAP47Q5SQN1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNAP47Q5SQN1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.84■■□□□ 1.09
SNAP47Q5SQN1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNAP47Q5SQN1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNAP47Q5SQN1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
SNAP47Q5SQN1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNAP47Q5SQN1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SNAP47Q5SQN1 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.83■■□□□ 1.09
SNAP47Q5SQN1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.83■■□□□ 1.09
SNAP47Q5SQN1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SNAP47Q5SQN1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNAP47Q5SQN1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.83■■□□□ 1.09
SNAP47Q5SQN1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.83■■□□□ 1.08
SNAP47Q5SQN1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
SNAP47Q5SQN1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.83■■□□□ 1.08
SNAP47Q5SQN1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SNAP47Q5SQN1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNAP47Q5SQN1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNAP47Q5SQN1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SNAP47Q5SQN1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNAP47Q5SQN1 C17orf82-201ENST00000623772 1530 ntBASIC21.82■■□□□ 1.08
SNAP47Q5SQN1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNAP47Q5SQN1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
SNAP47Q5SQN1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.82■■□□□ 1.08
SNAP47Q5SQN1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.82■■□□□ 1.08
SNAP47Q5SQN1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.82■■□□□ 1.08
SNAP47Q5SQN1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNAP47Q5SQN1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.82■■□□□ 1.08
SNAP47Q5SQN1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNAP47Q5SQN1 AP003733.4-201ENST00000623785 1697 ntBASIC21.82■■□□□ 1.08
SNAP47Q5SQN1 AL161729.1-201ENST00000604104 1402 ntBASIC21.81■■□□□ 1.08
SNAP47Q5SQN1 AC020928.2-201ENST00000588717 2197 ntBASIC21.81■■□□□ 1.08
SNAP47Q5SQN1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.81■■□□□ 1.08
SNAP47Q5SQN1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SNAP47Q5SQN1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNAP47Q5SQN1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.81■■□□□ 1.08
SNAP47Q5SQN1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.81■■□□□ 1.08
SNAP47Q5SQN1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNAP47Q5SQN1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNAP47Q5SQN1 ALDH1A3-203ENST00000557963 1670 ntBASIC21.81■■□□□ 1.08
SNAP47Q5SQN1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNAP47Q5SQN1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNAP47Q5SQN1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNAP47Q5SQN1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNAP47Q5SQN1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNAP47Q5SQN1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNAP47Q5SQN1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNAP47Q5SQN1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNAP47Q5SQN1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.8■■□□□ 1.08
SNAP47Q5SQN1 AL136967.2-201ENST00000623968 743 ntBASIC21.8■■□□□ 1.08
SNAP47Q5SQN1 AC138932.3-201ENST00000567634 1902 ntBASIC21.8■■□□□ 1.08
SNAP47Q5SQN1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNAP47Q5SQN1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SNAP47Q5SQN1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.8■■□□□ 1.08
SNAP47Q5SQN1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNAP47Q5SQN1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNAP47Q5SQN1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNAP47Q5SQN1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SNAP47Q5SQN1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNAP47Q5SQN1 AC006455.2-201ENST00000429931 906 ntBASIC21.79■■□□□ 1.08
SNAP47Q5SQN1 AC105265.2-201ENST00000467189 838 ntBASIC21.79■■□□□ 1.08
SNAP47Q5SQN1 AP001330.3-201ENST00000520123 633 ntBASIC21.79■■□□□ 1.08
SNAP47Q5SQN1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms