RNA–Protein interactions for RNA: ENST00000345635.8

SDSL-201, Transcript of serine dehydratase like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDSL, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDSL-201ENST00000345635 NISCHQ9Y2I1 1504 aa54.76■■■■■ 6.36
SDSL-201ENST00000345635 CCDC180Q9P1Z9 1646 aa49.08■■■■■ 5.45
SDSL-201ENST00000345635 ABCC9O60706 1549 aa48.57■■■■■ 5.37
SDSL-201ENST00000345635 RB1CC1Q8TDY2 1594 aa46.53■■■■■ 5.04
SDSL-201ENST00000345635 NACADO15069 1562 aa46.29■■■■■ 5
SDSL-201ENST00000345635 DCAF8L2P0C7V8 631 aa46.07■■■■■ 4.97
SDSL-201ENST00000345635 MYO15BQ96JP2 1530 aa45.79■■■■■ 4.92
SDSL-201ENST00000345635 ZCCHC6Q5VYS8 1495 aaKnown RBP45.45■■■■■ 4.87
SDSL-201ENST00000345635 UNC13AQ9UPW8 1703 aa45.43■■■■■ 4.86
SDSL-201ENST00000345635 DCAF1Q9Y4B6 1507 aa45.32■■■■■ 4.85
SDSL-201ENST00000345635 PABPN1Q86U42 306 aaKnown RBP eCLIP45.25■■■■■ 4.83
SDSL-201ENST00000345635 DNAJC5BQ9UF47 199 aa45.13■■■■■ 4.82
SDSL-201ENST00000345635 BICRAQ9NZM4 1560 aa45.03■■■■■ 4.8
SDSL-201ENST00000345635 SCRIBQ14160 1630 aa44.64■■■■■ 4.74
SDSL-201ENST00000345635 SHROOM4Q9ULL8 1493 aa44.62■■■■■ 4.73
SDSL-201ENST00000345635 EIF4G1Q04637 1599 aaKnown RBP43.95■■■■■ 4.63
SDSL-201ENST00000345635 CC2D2AQ9P2K1 1620 aa43.94■■■■■ 4.63
SDSL-201ENST00000345635 CECR2Q9BXF3 1484 aa43.76■■■■■ 4.6
SDSL-201ENST00000345635 NCAPD3P42695 1498 aa42.68■■■■■ 4.42
SDSL-201ENST00000345635 SMARCA4P51532 1647 aa42.66■■■■■ 4.42
SDSL-201ENST00000345635 ATAD2BQ9ULI0 1458 aa42.57■■■■■ 4.41
SDSL-201ENST00000345635 SMARCA2P51531 1590 aa42.56■■■■■ 4.4
SDSL-201ENST00000345635 BAZ1AQ9NRL2 1556 aaPredicted RBP42.54■■■■■ 4.4
SDSL-201ENST00000345635 HMGXB3Q12766 1538 aa42.42■■■■■ 4.38
SDSL-201ENST00000345635 PEG3Q9GZU2 1588 aa42.25■■■■■ 4.35
SDSL-201ENST00000345635 BAZ1BQ9UIG0 1483 aaKnown RBP42.23■■■■■ 4.35
SDSL-201ENST00000345635 MROH2BQ7Z745 1585 aa42.15■■■■■ 4.34
SDSL-201ENST00000345635 ERCC6Q03468 1493 aa42■■■■■ 4.31
SDSL-201ENST00000345635 CUX2O14529 1486 aa41.81■■■■■ 4.28
SDSL-201ENST00000345635 NESP48681 1621 aa41.8■■■■■ 4.28
SDSL-201ENST00000345635 LAMC3Q9Y6N6 1575 aa41.72■■■■■ 4.27
SDSL-201ENST00000345635 WIZO95785 1651 aa41.7■■■■■ 4.27
SDSL-201ENST00000345635 PDS5BQ9NTI5 1447 aa41.46■■■■■ 4.23
SDSL-201ENST00000345635 RSF1Q96T23 1441 aaPredicted RBP41.42■■■■■ 4.22
SDSL-201ENST00000345635 CADPSQ9ULU8 1353 aa41.4■■■■■ 4.22
SDSL-201ENST00000345635 KIF21AQ7Z4S6 1674 aa41.37■■■■■ 4.21
SDSL-201ENST00000345635 THOC2Q8NI27 1593 aaKnown RBP41.37■■■■■ 4.21
SDSL-201ENST00000345635 DNAJC5Q9H3Z4 198 aa41.3■■■■■ 4.2
SDSL-201ENST00000345635 TOP2AP11388 1531 aaKnown RBP41.23■■■■■ 4.19
SDSL-201ENST00000345635 MRC2Q9UBG0 1479 aa41.03■■■■■ 4.16
SDSL-201ENST00000345635 CFTRP13569 1480 aa41■■■■■ 4.15
SDSL-201ENST00000345635 CEP164Q9UPV0 1460 aa40.96■■■■■ 4.15
SDSL-201ENST00000345635 FANCD2Q9BXW9 1451 aa40.92■■■■■ 4.14
SDSL-201ENST00000345635 WDR62O43379 1518 aa40.91■■■■■ 4.14
SDSL-201ENST00000345635 PRDM2Q13029 1718 aa40.74■■■■■ 4.11
SDSL-201ENST00000345635 CCDC88BA6NC98 1476 aa40.72■■■■■ 4.11
SDSL-201ENST00000345635 URB2Q14146 1524 aaKnown RBP40.52■■■■■ 4.08
SDSL-201ENST00000345635 ABCC8Q09428 1581 aa40.24■■■■■ 4.03
SDSL-201ENST00000345635 TOPBP1Q92547 1522 aa40.18■■■■■ 4.02
SDSL-201ENST00000345635 IFT140Q96RY7 1462 aa40.13■■■■■ 4.02
SDSL-201ENST00000345635 DNMBPQ6XZF7 1577 aa40.11■■■■■ 4.01
SDSL-201ENST00000345635 OSCARQ8IYS5 282 aa39.97■■■■□ 3.99
SDSL-201ENST00000345635 ZNF608Q9ULD9 1512 aaPredicted RBP39.93■■■■□ 3.98
SDSL-201ENST00000345635 SUPT5HO00267 1087 aaKnown RBP39.87■■■■□ 3.97
SDSL-201ENST00000345635 EIF4G3O43432 1585 aaKnown RBP39.8■■■■□ 3.96
SDSL-201ENST00000345635 TARBP1Q13395 1621 aaKnown RBP39.8■■■■□ 3.96
SDSL-201ENST00000345635 POLA1P09884 1462 aaPredicted RBP39.78■■■■□ 3.96
SDSL-201ENST00000345635 SOGA1O94964 1423 aa39.64■■■■□ 3.94
SDSL-201ENST00000345635 AQRO60306 1485 aaKnown RBP eCLIP39.64■■■■□ 3.94
SDSL-201ENST00000345635 TRIM41Q8WV44 630 aa39.63■■■■□ 3.93
SDSL-201ENST00000345635 FGD5Q6ZNL6 1462 aa39.59■■■■□ 3.93
SDSL-201ENST00000345635 RAD54L2Q9Y4B4 1467 aa39.59■■■■□ 3.93
SDSL-201ENST00000345635 CUX1P39880 1505 aa39.58■■■■□ 3.93
SDSL-201ENST00000345635 WDR97A6NE52 1622 aa39.54■■■■□ 3.92
SDSL-201ENST00000345635 CHD1O14646 1710 aa39.46■■■■□ 3.91
SDSL-201ENST00000345635 TDRD9Q8NDG6 1382 aaKnown RBP39.46■■■■□ 3.91
SDSL-201ENST00000345635 FBLN2P98095 1184 aa39.36■■■■□ 3.89
SDSL-201ENST00000345635 RIMBP3CA6NJZ7 1639 aa39.36■■■■□ 3.89
SDSL-201ENST00000345635 RIMBP3BA6NNM3 1639 aa39.36■■■■□ 3.89
SDSL-201ENST00000345635 RIMBP3Q9UFD9 1639 aa39.36■■■■□ 3.89
SDSL-201ENST00000345635 GRIN2BQ13224 1484 aa39.28■■■■□ 3.88
SDSL-201ENST00000345635 SNAPC4Q5SXM2 1469 aa39.27■■■■□ 3.88
SDSL-201ENST00000345635 ARHGEF11O15085 1522 aa39.26■■■■□ 3.88
SDSL-201ENST00000345635 MAGI1Q96QZ7 1491 aaPredicted RBP39.25■■■■□ 3.87
SDSL-201ENST00000345635 ABCA10Q8WWZ4 1543 aa39.19■■■■□ 3.86
SDSL-201ENST00000345635 PBRM1Q86U86 1689 aa39.17■■■■□ 3.86
SDSL-201ENST00000345635 GAPVD1Q14C86 1478 aa39.17■■■■□ 3.86
SDSL-201ENST00000345635 CHMP7Q8WUX9 453 aaPredicted RBP39.17■■■■□ 3.86
SDSL-201ENST00000345635 BIVM-ERCC5R4GMW8 1640 aa39.14■■■■□ 3.86
SDSL-201ENST00000345635 WRNQ14191 1432 aaPredicted RBP eCLIP39.14■■■■□ 3.86
SDSL-201ENST00000345635 TOP2BQ02880 1626 aa39.13■■■■□ 3.85
SDSL-201ENST00000345635 SYNJ2O15056 1496 aa39.1■■■■□ 3.85
SDSL-201ENST00000345635 ABCA5Q8WWZ7 1642 aa39.09■■■■□ 3.85
SDSL-201ENST00000345635 SYNJ1O43426 1573 aa39.07■■■■□ 3.85
SDSL-201ENST00000345635 CLASP1Q7Z460 1538 aa38.98■■■■□ 3.83
SDSL-201ENST00000345635 CYB5RLQ6IPT4 315 aa38.95■■■■□ 3.83
SDSL-201ENST00000345635 ARAP1Q96P48 1450 aa38.86■■■■□ 3.81
SDSL-201ENST00000345635 ADAMTS12P58397 1594 aa38.76■■■■□ 3.8
SDSL-201ENST00000345635 ERICH3Q5RHP9 1530 aa38.75■■■■□ 3.79
SDSL-201ENST00000345635 GRIN2AQ12879 1464 aa38.75■■■■□ 3.79
SDSL-201ENST00000345635 FHAD1B1AJZ9 1412 aa38.7■■■■□ 3.79
SDSL-201ENST00000345635 NUP160Q12769 1436 aa38.58■■■■□ 3.77
SDSL-201ENST00000345635 CEP170Q5SW79 1584 aa38.55■■■■□ 3.76
SDSL-201ENST00000345635 TRHP20396 242 aaPredicted RBP38.44■■■■□ 3.74
SDSL-201ENST00000345635 SHROOM2Q13796 1616 aa38.4■■■■□ 3.74
SDSL-201ENST00000345635 KIF27Q86VH2 1401 aa38.39■■■■□ 3.74
SDSL-201ENST00000345635 ERCC6L2Q5T890 1561 aa38.32■■■■□ 3.73
SDSL-201ENST00000345635 CUL7Q14999 1698 aa38.29■■■■□ 3.72
SDSL-201ENST00000345635 IGF1RP08069 1367 aa38.26■■■■□ 3.72
SDSL-201ENST00000345635 JPH4Q96JJ6 628 aa38.21■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 205.4 ms