RNA–Protein interactions for RNA: ENST00000473578.5

CAMTA1-208, Transcript of calmodulin binding transcription activator 1, humanhuman

TSL 1 (best) BASIC

Gene CAMTA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMTA1-208ENST00000473578 NISCHQ9Y2I1 1504 aa54.51■■■■■ 6.32
CAMTA1-208ENST00000473578 CCDC180Q9P1Z9 1646 aa48.61■■■■■ 5.37
CAMTA1-208ENST00000473578 ABCC9O60706 1549 aa48.24■■■■■ 5.31
CAMTA1-208ENST00000473578 RB1CC1Q8TDY2 1594 aa46.09■■■■■ 4.97
CAMTA1-208ENST00000473578 DCAF8L2P0C7V8 631 aa46■■■■■ 4.95
CAMTA1-208ENST00000473578 NACADO15069 1562 aa45.9■■■■■ 4.94
CAMTA1-208ENST00000473578 MYO15BQ96JP2 1530 aa45.41■■■■■ 4.86
CAMTA1-208ENST00000473578 ZCCHC6Q5VYS8 1495 aaKnown RBP45.27■■■■■ 4.84
CAMTA1-208ENST00000473578 PABPN1Q86U42 306 aaKnown RBP eCLIP45.06■■■■■ 4.8
CAMTA1-208ENST00000473578 DCAF1Q9Y4B6 1507 aa45.02■■■■■ 4.8
CAMTA1-208ENST00000473578 UNC13AQ9UPW8 1703 aa44.92■■■■■ 4.78
CAMTA1-208ENST00000473578 DNAJC5BQ9UF47 199 aa44.78■■■■■ 4.76
CAMTA1-208ENST00000473578 BICRAQ9NZM4 1560 aa44.67■■■■■ 4.74
CAMTA1-208ENST00000473578 SCRIBQ14160 1630 aa44.41■■■■■ 4.7
CAMTA1-208ENST00000473578 SHROOM4Q9ULL8 1493 aa44.15■■■■■ 4.66
CAMTA1-208ENST00000473578 EIF4G1Q04637 1599 aaKnown RBP43.58■■■■■ 4.57
CAMTA1-208ENST00000473578 CC2D2AQ9P2K1 1620 aa43.54■■■■■ 4.56
CAMTA1-208ENST00000473578 CECR2Q9BXF3 1484 aa43.39■■■■■ 4.54
CAMTA1-208ENST00000473578 AEBP2Q6ZN18 517 aaPredicted RBP42.54■■■■■ 4.4
CAMTA1-208ENST00000473578 NCAPD3P42695 1498 aa42.39■■■■■ 4.38
CAMTA1-208ENST00000473578 SMARCA4P51532 1647 aa42.38■■■■■ 4.38
CAMTA1-208ENST00000473578 ATAD2BQ9ULI0 1458 aa42.34■■■■■ 4.37
CAMTA1-208ENST00000473578 BAZ1AQ9NRL2 1556 aaPredicted RBP42.29■■■■■ 4.36
CAMTA1-208ENST00000473578 SMARCA2P51531 1590 aa42.24■■■■■ 4.35
CAMTA1-208ENST00000473578 HMGXB3Q12766 1538 aa42.08■■■■■ 4.33
CAMTA1-208ENST00000473578 MROH2BQ7Z745 1585 aa42.01■■■■■ 4.32
CAMTA1-208ENST00000473578 BAZ1BQ9UIG0 1483 aaKnown RBP41.98■■■■■ 4.31
CAMTA1-208ENST00000473578 PEG3Q9GZU2 1588 aa41.94■■■■■ 4.3
CAMTA1-208ENST00000473578 ERCC6Q03468 1493 aa41.65■■■■■ 4.26
CAMTA1-208ENST00000473578 NESP48681 1621 aa41.56■■■■■ 4.24
CAMTA1-208ENST00000473578 WIZO95785 1651 aa41.51■■■■■ 4.24
CAMTA1-208ENST00000473578 CHIC1Q5VXU3 224 aa41.42■■■■■ 4.22
CAMTA1-208ENST00000473578 RSF1Q96T23 1441 aaPredicted RBP41.36■■■■■ 4.21
CAMTA1-208ENST00000473578 LAMC3Q9Y6N6 1575 aa41.33■■■■■ 4.21
CAMTA1-208ENST00000473578 CUX2O14529 1486 aa41.32■■■■■ 4.2
CAMTA1-208ENST00000473578 CADPSQ9ULU8 1353 aa41.17■■■■■ 4.18
CAMTA1-208ENST00000473578 PDS5BQ9NTI5 1447 aa41.15■■■■■ 4.18
CAMTA1-208ENST00000473578 TOP2AP11388 1531 aaKnown RBP41.03■■■■■ 4.16
CAMTA1-208ENST00000473578 KIF21AQ7Z4S6 1674 aa40.96■■■■■ 4.15
CAMTA1-208ENST00000473578 THOC2Q8NI27 1593 aaKnown RBP40.95■■■■■ 4.15
CAMTA1-208ENST00000473578 CFTRP13569 1480 aa40.77■■■■■ 4.12
CAMTA1-208ENST00000473578 DNAJC5Q9H3Z4 198 aa40.76■■■■■ 4.12
CAMTA1-208ENST00000473578 MRC2Q9UBG0 1479 aa40.72■■■■■ 4.11
CAMTA1-208ENST00000473578 FANCD2Q9BXW9 1451 aa40.69■■■■■ 4.1
CAMTA1-208ENST00000473578 CEP164Q9UPV0 1460 aa40.68■■■■■ 4.1
CAMTA1-208ENST00000473578 CCDC88BA6NC98 1476 aa40.61■■■■■ 4.09
CAMTA1-208ENST00000473578 WDR62O43379 1518 aa40.56■■■■■ 4.08
CAMTA1-208ENST00000473578 URB2Q14146 1524 aaKnown RBP40.28■■■■■ 4.04
CAMTA1-208ENST00000473578 PRDM2Q13029 1718 aa40.27■■■■■ 4.04
CAMTA1-208ENST00000473578 SUPT5HO00267 1087 aaKnown RBP40.07■■■■■ 4.01
CAMTA1-208ENST00000473578 TOPBP1Q92547 1522 aa39.95■■■■□ 3.99
CAMTA1-208ENST00000473578 ABCC8Q09428 1581 aa39.93■■■■□ 3.98
CAMTA1-208ENST00000473578 IFT140Q96RY7 1462 aa39.84■■■■□ 3.97
CAMTA1-208ENST00000473578 DNMBPQ6XZF7 1577 aa39.83■■■■□ 3.97
CAMTA1-208ENST00000473578 ZNF608Q9ULD9 1512 aaPredicted RBP39.71■■■■□ 3.95
CAMTA1-208ENST00000473578 OSCARQ8IYS5 282 aa39.63■■■■□ 3.93
CAMTA1-208ENST00000473578 POLA1P09884 1462 aaPredicted RBP39.58■■■■□ 3.93
CAMTA1-208ENST00000473578 TARBP1Q13395 1621 aaKnown RBP39.5■■■■□ 3.91
CAMTA1-208ENST00000473578 EIF4G3O43432 1585 aaKnown RBP39.48■■■■□ 3.91
CAMTA1-208ENST00000473578 SOGA1O94964 1423 aa39.47■■■■□ 3.91
CAMTA1-208ENST00000473578 AQRO60306 1485 aaKnown RBP eCLIP39.46■■■■□ 3.91
CAMTA1-208ENST00000473578 RAD54L2Q9Y4B4 1467 aa39.45■■■■□ 3.91
CAMTA1-208ENST00000473578 CUX1P39880 1505 aa39.44■■■■□ 3.9
CAMTA1-208ENST00000473578 FGD5Q6ZNL6 1462 aa39.42■■■■□ 3.9
CAMTA1-208ENST00000473578 TDRD9Q8NDG6 1382 aaKnown RBP39.33■■■■□ 3.89
CAMTA1-208ENST00000473578 TRIM41Q8WV44 630 aa39.28■■■■□ 3.88
CAMTA1-208ENST00000473578 FBLN2P98095 1184 aa39.21■■■■□ 3.87
CAMTA1-208ENST00000473578 WDR97A6NE52 1622 aa39.14■■■■□ 3.86
CAMTA1-208ENST00000473578 CHD1O14646 1710 aa39.06■■■■□ 3.84
CAMTA1-208ENST00000473578 SNAPC4Q5SXM2 1469 aa39.05■■■■□ 3.84
CAMTA1-208ENST00000473578 WRNQ14191 1432 aaPredicted RBP eCLIP39.04■■■■□ 3.84
CAMTA1-208ENST00000473578 GRIN2BQ13224 1484 aa39.04■■■■□ 3.84
CAMTA1-208ENST00000473578 CHMP7Q8WUX9 453 aaPredicted RBP38.98■■■■□ 3.83
CAMTA1-208ENST00000473578 ABCA10Q8WWZ4 1543 aa38.98■■■■□ 3.83
CAMTA1-208ENST00000473578 GAPVD1Q14C86 1478 aa38.97■■■■□ 3.83
CAMTA1-208ENST00000473578 MAGI1Q96QZ7 1491 aaPredicted RBP38.96■■■■□ 3.83
CAMTA1-208ENST00000473578 TOP2BQ02880 1626 aa38.93■■■■□ 3.82
CAMTA1-208ENST00000473578 RIMBP3CA6NJZ7 1639 aa38.92■■■■□ 3.82
CAMTA1-208ENST00000473578 RIMBP3BA6NNM3 1639 aa38.92■■■■□ 3.82
CAMTA1-208ENST00000473578 RIMBP3Q9UFD9 1639 aa38.92■■■■□ 3.82
CAMTA1-208ENST00000473578 SYNJ1O43426 1573 aa38.91■■■■□ 3.82
CAMTA1-208ENST00000473578 BIVM-ERCC5R4GMW8 1640 aa38.89■■■■□ 3.82
CAMTA1-208ENST00000473578 ARHGEF11O15085 1522 aa38.89■■■■□ 3.82
CAMTA1-208ENST00000473578 SYNJ2O15056 1496 aa38.83■■■■□ 3.81
CAMTA1-208ENST00000473578 ABCA5Q8WWZ7 1642 aa38.82■■■■□ 3.81
CAMTA1-208ENST00000473578 PBRM1Q86U86 1689 aa38.81■■■■□ 3.8
CAMTA1-208ENST00000473578 CYB5RLQ6IPT4 315 aa38.69■■■■□ 3.78
CAMTA1-208ENST00000473578 CLASP1Q7Z460 1538 aa38.64■■■■□ 3.78
CAMTA1-208ENST00000473578 ARAP1Q96P48 1450 aa38.54■■■■□ 3.76
CAMTA1-208ENST00000473578 GRIN2AQ12879 1464 aa38.52■■■■□ 3.76
CAMTA1-208ENST00000473578 ADAMTS12P58397 1594 aa38.52■■■■□ 3.76
CAMTA1-208ENST00000473578 ERICH3Q5RHP9 1530 aa38.5■■■■□ 3.75
CAMTA1-208ENST00000473578 FHAD1B1AJZ9 1412 aa38.5■■■■□ 3.75
CAMTA1-208ENST00000473578 NUP160Q12769 1436 aa38.35■■■■□ 3.73
CAMTA1-208ENST00000473578 CEP170Q5SW79 1584 aa38.31■■■■□ 3.72
CAMTA1-208ENST00000473578 KIF27Q86VH2 1401 aa38.28■■■■□ 3.72
CAMTA1-208ENST00000473578 IGF1RP08069 1367 aa38.19■■■■□ 3.7
CAMTA1-208ENST00000473578 TRHP20396 242 aaPredicted RBP38.13■■■■□ 3.69
CAMTA1-208ENST00000473578 ERCC6L2Q5T890 1561 aa38.1■■■■□ 3.69
CAMTA1-208ENST00000473578 JPH4Q96JJ6 628 aa38.06■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms