Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.29■■□□□ 1.32
FNDC3AQ9Y2H6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.29■■□□□ 1.32
FNDC3AQ9Y2H6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.29■■□□□ 1.32
FNDC3AQ9Y2H6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.29■■□□□ 1.32
FNDC3AQ9Y2H6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.28■■□□□ 1.32
FNDC3AQ9Y2H6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
FNDC3AQ9Y2H6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.28■■□□□ 1.32
FNDC3AQ9Y2H6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.28■■□□□ 1.32
FNDC3AQ9Y2H6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.28■■□□□ 1.32
FNDC3AQ9Y2H6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
FNDC3AQ9Y2H6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.28■■□□□ 1.32
FNDC3AQ9Y2H6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
FNDC3AQ9Y2H6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
FNDC3AQ9Y2H6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FNDC3AQ9Y2H6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
FNDC3AQ9Y2H6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.27■■□□□ 1.32
FNDC3AQ9Y2H6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
FNDC3AQ9Y2H6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FNDC3AQ9Y2H6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.27■■□□□ 1.32
FNDC3AQ9Y2H6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.27■■□□□ 1.32
FNDC3AQ9Y2H6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
FNDC3AQ9Y2H6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.27■■□□□ 1.32
FNDC3AQ9Y2H6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
FNDC3AQ9Y2H6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FNDC3AQ9Y2H6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.27■■□□□ 1.32
FNDC3AQ9Y2H6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FNDC3AQ9Y2H6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.26■■□□□ 1.31
FNDC3AQ9Y2H6 AC005837.3-201ENST00000612163 286 ntBASIC23.26■■□□□ 1.31
FNDC3AQ9Y2H6 HLA-L-211ENST00000482052 1765 ntBASIC23.26■■□□□ 1.31
FNDC3AQ9Y2H6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
FNDC3AQ9Y2H6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FNDC3AQ9Y2H6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
FNDC3AQ9Y2H6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FNDC3AQ9Y2H6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.25■■□□□ 1.31
FNDC3AQ9Y2H6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FNDC3AQ9Y2H6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FNDC3AQ9Y2H6 LINC01124-201ENST00000409786 2117 ntBASIC23.24■■□□□ 1.31
FNDC3AQ9Y2H6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FNDC3AQ9Y2H6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
FNDC3AQ9Y2H6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
FNDC3AQ9Y2H6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.24■■□□□ 1.31
FNDC3AQ9Y2H6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FNDC3AQ9Y2H6 AL139125.2-201ENST00000623134 1869 ntBASIC23.24■■□□□ 1.31
FNDC3AQ9Y2H6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FNDC3AQ9Y2H6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
FNDC3AQ9Y2H6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
FNDC3AQ9Y2H6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
FNDC3AQ9Y2H6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
FNDC3AQ9Y2H6 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.23■■□□□ 1.31
FNDC3AQ9Y2H6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.23■■□□□ 1.31
FNDC3AQ9Y2H6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.23■■□□□ 1.31
FNDC3AQ9Y2H6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
FNDC3AQ9Y2H6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FNDC3AQ9Y2H6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.22■■□□□ 1.31
FNDC3AQ9Y2H6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FNDC3AQ9Y2H6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FNDC3AQ9Y2H6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.22■■□□□ 1.31
FNDC3AQ9Y2H6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.22■■□□□ 1.31
FNDC3AQ9Y2H6 AL512631.2-201ENST00000604634 923 ntBASIC23.22■■□□□ 1.31
FNDC3AQ9Y2H6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FNDC3AQ9Y2H6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
FNDC3AQ9Y2H6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.21■■□□□ 1.31
FNDC3AQ9Y2H6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
FNDC3AQ9Y2H6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FNDC3AQ9Y2H6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
FNDC3AQ9Y2H6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
FNDC3AQ9Y2H6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FNDC3AQ9Y2H6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
FNDC3AQ9Y2H6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FNDC3AQ9Y2H6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FNDC3AQ9Y2H6 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.19■■□□□ 1.3
FNDC3AQ9Y2H6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FNDC3AQ9Y2H6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FNDC3AQ9Y2H6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FNDC3AQ9Y2H6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
FNDC3AQ9Y2H6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FNDC3AQ9Y2H6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FNDC3AQ9Y2H6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
FNDC3AQ9Y2H6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.18■■□□□ 1.3
FNDC3AQ9Y2H6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FNDC3AQ9Y2H6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.18■■□□□ 1.3
FNDC3AQ9Y2H6 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.18■■□□□ 1.3
FNDC3AQ9Y2H6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FNDC3AQ9Y2H6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FNDC3AQ9Y2H6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FNDC3AQ9Y2H6 AF131216.4-201ENST00000638924 1588 ntBASIC23.18■■□□□ 1.3
FNDC3AQ9Y2H6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
FNDC3AQ9Y2H6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FNDC3AQ9Y2H6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FNDC3AQ9Y2H6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.17■■□□□ 1.3
FNDC3AQ9Y2H6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.17■■□□□ 1.3
FNDC3AQ9Y2H6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FNDC3AQ9Y2H6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
FNDC3AQ9Y2H6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.17■■□□□ 1.3
FNDC3AQ9Y2H6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
FNDC3AQ9Y2H6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FNDC3AQ9Y2H6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
FNDC3AQ9Y2H6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FNDC3AQ9Y2H6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FNDC3AQ9Y2H6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms