RNA–Protein interactions for RNA: ENST00000262225.7

TMED2-201, Transcript of transmembrane p24 trafficking protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED2, Length 2,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED2-201ENST00000262225 NISCHQ9Y2I1 1504 aa51.18■■■■■ 5.78
TMED2-201ENST00000262225 CCDC180Q9P1Z9 1646 aa44.1■■■■■ 4.65
TMED2-201ENST00000262225 ZCCHC6Q5VYS8 1495 aaKnown RBP43.05■■■■■ 4.48
TMED2-201ENST00000262225 DCAF8L2P0C7V8 631 aa42.6■■■■■ 4.41
TMED2-201ENST00000262225 SHROOM4Q9ULL8 1493 aa42.58■■■■■ 4.41
TMED2-201ENST00000262225 DCAF1Q9Y4B6 1507 aa42.08■■■■■ 4.33
TMED2-201ENST00000262225 ABCC9O60706 1549 aa41.72■■■■■ 4.27
TMED2-201ENST00000262225 MYO15BQ96JP2 1530 aa41.34■■■■■ 4.21
TMED2-201ENST00000262225 SUPT5HO00267 1087 aaKnown RBP41.23■■■■■ 4.19
TMED2-201ENST00000262225 NACADO15069 1562 aa41.06■■■■■ 4.16
TMED2-201ENST00000262225 SCRIBQ14160 1630 aa41■■■■■ 4.15
TMED2-201ENST00000262225 RB1CC1Q8TDY2 1594 aa40.62■■■■■ 4.09
TMED2-201ENST00000262225 RSF1Q96T23 1441 aaPredicted RBP40.02■■■■■ 4
TMED2-201ENST00000262225 CECR2Q9BXF3 1484 aa39.93■■■■□ 3.98
TMED2-201ENST00000262225 UNC13AQ9UPW8 1703 aa39.89■■■■□ 3.98
TMED2-201ENST00000262225 MROH2BQ7Z745 1585 aa39.68■■■■□ 3.94
TMED2-201ENST00000262225 PABPN1Q86U42 306 aaKnown RBP eCLIP39.64■■■■□ 3.94
TMED2-201ENST00000262225 CHIC1Q5VXU3 224 aa39.61■■■■□ 3.93
TMED2-201ENST00000262225 BICRAQ9NZM4 1560 aa39.52■■■■□ 3.92
TMED2-201ENST00000262225 BAZ1AQ9NRL2 1556 aaPredicted RBP39.39■■■■□ 3.9
TMED2-201ENST00000262225 WIZO95785 1651 aa39.37■■■■□ 3.89
TMED2-201ENST00000262225 SMARCA4P51532 1647 aa39.19■■■■□ 3.86
TMED2-201ENST00000262225 TOP2AP11388 1531 aaKnown RBP38.81■■■■□ 3.8
TMED2-201ENST00000262225 CCDC88BA6NC98 1476 aa38.6■■■■□ 3.77
TMED2-201ENST00000262225 PEG3Q9GZU2 1588 aa38.57■■■■□ 3.76
TMED2-201ENST00000262225 TRIM41Q8WV44 630 aa38.56■■■■□ 3.76
TMED2-201ENST00000262225 SMARCA2P51531 1590 aa38.54■■■■□ 3.76
TMED2-201ENST00000262225 ATAD2BQ9ULI0 1458 aa38.5■■■■□ 3.75
TMED2-201ENST00000262225 EIF4G1Q04637 1599 aaKnown RBP38.36■■■■□ 3.73
TMED2-201ENST00000262225 LOC105371045A0A1W2PR82 267 aa38.31■■■■□ 3.72
TMED2-201ENST00000262225 BAZ1BQ9UIG0 1483 aaKnown RBP38.29■■■■□ 3.72
TMED2-201ENST00000262225 FAM9AQ8IZU1 332 aaPredicted RBP38.11■■■■□ 3.69
TMED2-201ENST00000262225 ABCC8Q09428 1581 aa38.04■■■■□ 3.68
TMED2-201ENST00000262225 NCAPD3P42695 1498 aa38■■■■□ 3.67
TMED2-201ENST00000262225 HMGXB3Q12766 1538 aa37.88■■■■□ 3.65
TMED2-201ENST00000262225 EHMT2Q96KQ7 1210 aa37.73■■■■□ 3.63
TMED2-201ENST00000262225 WRNQ14191 1432 aaPredicted RBP eCLIP37.62■■■■□ 3.61
TMED2-201ENST00000262225 CC2D2AQ9P2K1 1620 aa37.61■■■■□ 3.61
TMED2-201ENST00000262225 SOGA1O94964 1423 aa37.48■■■■□ 3.59
TMED2-201ENST00000262225 SYNJ1O43426 1573 aa37.45■■■■□ 3.58
TMED2-201ENST00000262225 RUSC2Q8N2Y8 1516 aa37.35■■■■□ 3.57
TMED2-201ENST00000262225 CFTRP13569 1480 aa37.34■■■■□ 3.57
TMED2-201ENST00000262225 CSRNP3Q8WYN3 585 aa37.21■■■■□ 3.55
TMED2-201ENST00000262225 EEA1Q15075 1411 aa37.17■■■■□ 3.54
TMED2-201ENST00000262225 CADPSQ9ULU8 1353 aa37.16■■■■□ 3.54
TMED2-201ENST00000262225 TOP2BQ02880 1626 aa37.13■■■■□ 3.53
TMED2-201ENST00000262225 PCGF6Q9BYE7 350 aa37.07■■■■□ 3.52
TMED2-201ENST00000262225 CUX1P39880 1505 aa37.03■■■■□ 3.52
TMED2-201ENST00000262225 BIVM-ERCC5R4GMW8 1640 aa37.02■■■■□ 3.52
TMED2-201ENST00000262225 DNAJC5BQ9UF47 199 aa36.95■■■■□ 3.51
TMED2-201ENST00000262225 PRDM2Q13029 1718 aa36.93■■■■□ 3.5
TMED2-201ENST00000262225 UBTFP17480 764 aaKnown RBP36.89■■■■□ 3.5
TMED2-201ENST00000262225 TNIKQ9UKE5 1360 aa36.83■■■■□ 3.49
TMED2-201ENST00000262225 NESP48681 1621 aa36.82■■■■□ 3.49
TMED2-201ENST00000262225 GOLGA3Q08378 1498 aa36.81■■■■□ 3.48
TMED2-201ENST00000262225 FANCD2Q9BXW9 1451 aa36.75■■■■□ 3.47
TMED2-201ENST00000262225 CEP162Q5TB80 1403 aa36.74■■■■□ 3.47
TMED2-201ENST00000262225 CEP164Q9UPV0 1460 aa36.74■■■■□ 3.47
TMED2-201ENST00000262225 TRIM26Q12899 539 aaPredicted RBP36.72■■■■□ 3.47
TMED2-201ENST00000262225 KIF21BO75037 1637 aa36.68■■■■□ 3.46
TMED2-201ENST00000262225 RAPGEF2Q9Y4G8 1499 aa36.62■■■■□ 3.45
TMED2-201ENST00000262225 PPARGC1BQ86YN6 1023 aaKnown RBP36.59■■■■□ 3.45
TMED2-201ENST00000262225 KIF27Q86VH2 1401 aa36.58■■■■□ 3.45
TMED2-201ENST00000262225 FGD5Q6ZNL6 1462 aa36.54■■■■□ 3.44
TMED2-201ENST00000262225 LAMC3Q9Y6N6 1575 aa36.54■■■■□ 3.44
TMED2-201ENST00000262225 PRXQ9BXM0 1461 aa36.47■■■■□ 3.43
TMED2-201ENST00000262225 CUX2O14529 1486 aa36.45■■■■□ 3.43
TMED2-201ENST00000262225 TOPBP1Q92547 1522 aa36.39■■■■□ 3.42
TMED2-201ENST00000262225 DNMBPQ6XZF7 1577 aa36.39■■■■□ 3.42
TMED2-201ENST00000262225 RANGAP1P46060 587 aaPredicted RBP36.37■■■■□ 3.41
TMED2-201ENST00000262225 PDS5BQ9NTI5 1447 aa36.34■■■■□ 3.41
TMED2-201ENST00000262225 CLIP1P30622 1438 aa36.33■■■■□ 3.41
TMED2-201ENST00000262225 ERICH3Q5RHP9 1530 aa36.33■■■■□ 3.41
TMED2-201ENST00000262225 IGF1RP08069 1367 aa36.31■■■■□ 3.4
TMED2-201ENST00000262225 RAD54L2Q9Y4B4 1467 aa36.31■■■■□ 3.4
TMED2-201ENST00000262225 POLA1P09884 1462 aaPredicted RBP36.29■■■■□ 3.4
TMED2-201ENST00000262225 URB2Q14146 1524 aaKnown RBP36.28■■■■□ 3.4
TMED2-201ENST00000262225 HRCP23327 699 aa36.27■■■■□ 3.4
TMED2-201ENST00000262225 TTBK1Q5TCY1 1321 aaPredicted RBP36.2■■■■□ 3.39
TMED2-201ENST00000262225 KIF21AQ7Z4S6 1674 aa36.18■■■■□ 3.38
TMED2-201ENST00000262225 ABCA10Q8WWZ4 1543 aa36.14■■■■□ 3.38
TMED2-201ENST00000262225 CARMIL1Q5VZK9 1371 aa36.12■■■■□ 3.37
TMED2-201ENST00000262225 VPS8Q8N3P4 1428 aa36.03■■■■□ 3.36
TMED2-201ENST00000262225 TDRD9Q8NDG6 1382 aaKnown RBP35.95■■■■□ 3.34
TMED2-201ENST00000262225 ARAP1Q96P48 1450 aa35.9■■■■□ 3.34
TMED2-201ENST00000262225 WDR97A6NE52 1622 aa35.87■■■■□ 3.33
TMED2-201ENST00000262225 MRC2Q9UBG0 1479 aa35.83■■■■□ 3.33
TMED2-201ENST00000262225 ARHGAP35Q9NRY4 1499 aa35.8■■■■□ 3.32
TMED2-201ENST00000262225 APLP2Q06481 763 aa35.79■■■■□ 3.32
TMED2-201ENST00000262225 GAPVD1Q14C86 1478 aa35.78■■■■□ 3.32
TMED2-201ENST00000262225 ABCA5Q8WWZ7 1642 aa35.75■■■■□ 3.31
TMED2-201ENST00000262225 TARBP1Q13395 1621 aaKnown RBP35.75■■■■□ 3.31
TMED2-201ENST00000262225 CUL7Q14999 1698 aa35.7■■■■□ 3.31
TMED2-201ENST00000262225 ERCC6Q03468 1493 aa35.62■■■■□ 3.29
TMED2-201ENST00000262225 AQRO60306 1485 aaKnown RBP eCLIP35.6■■■■□ 3.291e-6■■□□□ 11.4
TMED2-201ENST00000262225 WDR62O43379 1518 aa35.58■■■■□ 3.29
TMED2-201ENST00000262225 P3H3Q8IVL6 736 aa35.57■■■■□ 3.28
TMED2-201ENST00000262225 KANK4Q5T7N3 995 aaPredicted RBP35.54■■■■□ 3.28
TMED2-201ENST00000262225 ZNF608Q9ULD9 1512 aaPredicted RBP35.47■■■■□ 3.27
TMED2-201ENST00000262225 IFT140Q96RY7 1462 aa35.46■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms