Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV22A0A0B4J277 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAV22A0A0B4J277 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV22A0A0B4J277 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV22A0A0B4J277 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAV22A0A0B4J277 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV22A0A0B4J277 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TRAV22A0A0B4J277 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV22A0A0B4J277 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV22A0A0B4J277 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TRAV22A0A0B4J277 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV22A0A0B4J277 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV22A0A0B4J277 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV22A0A0B4J277 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV22A0A0B4J277 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TRAV22A0A0B4J277 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAV22A0A0B4J277 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TRAV22A0A0B4J277 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV22A0A0B4J277 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV22A0A0B4J277 GUSBP5-202ENST00000510805 1989 ntBASIC12.98□□□□□ -0.33
TRAV22A0A0B4J277 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV22A0A0B4J277 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 PALM-208ENST00000592155 2272 ntTSL 4 BASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 SHD-204ENST00000599689 1729 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 LINC00273-201ENST00000539813 1452 ntBASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TRAV22A0A0B4J277 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 ECEL1P1-201ENST00000373592 1742 ntBASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV22A0A0B4J277 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV22A0A0B4J277 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
TRAV22A0A0B4J277 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
TRAV22A0A0B4J277 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
TRAV22A0A0B4J277 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC12.96□□□□□ -0.34
TRAV22A0A0B4J277 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV22A0A0B4J277 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV22A0A0B4J277 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV22A0A0B4J277 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAV22A0A0B4J277 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV22A0A0B4J277 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV22A0A0B4J277 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRAV22A0A0B4J277 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TRAV22A0A0B4J277 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV22A0A0B4J277 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRAV22A0A0B4J277 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TRAV22A0A0B4J277 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV22A0A0B4J277 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV22A0A0B4J277 LSR-203ENST00000360798 1963 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV22A0A0B4J277 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV22A0A0B4J277 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRAV22A0A0B4J277 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV22A0A0B4J277 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV22A0A0B4J277 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV22A0A0B4J277 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV22A0A0B4J277 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV22A0A0B4J277 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV22A0A0B4J277 EI24-212ENST00000615917 1407 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV22A0A0B4J277 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV22A0A0B4J277 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV22A0A0B4J277 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV22A0A0B4J277 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TRAV22A0A0B4J277 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV22A0A0B4J277 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV22A0A0B4J277 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV22A0A0B4J277 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV22A0A0B4J277 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV22A0A0B4J277 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
TRAV22A0A0B4J277 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV22A0A0B4J277 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV22A0A0B4J277 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms