RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 NISCHQ9Y2I1 1504 aa37.8■■■■□ 3.64
AC009041.2-204ENST00000568394 SHROOM4Q9ULL8 1493 aa34.45■■■■□ 3.11
AC009041.2-204ENST00000568394 DCAF8L2P0C7V8 631 aa34.34■■■■□ 3.09
AC009041.2-204ENST00000568394 SUPT5HO00267 1087 aaKnown RBP33.78■■■■□ 3
AC009041.2-204ENST00000568394 HRCP23327 699 aa33.11■■■□□ 2.89
AC009041.2-204ENST00000568394 PCGF6Q9BYE7 350 aa33.08■■■□□ 2.89
AC009041.2-204ENST00000568394 PPARGC1BQ86YN6 1023 aaKnown RBP33.01■■■□□ 2.88
AC009041.2-204ENST00000568394 EHMT2Q96KQ7 1210 aa32.22■■■□□ 2.75
AC009041.2-204ENST00000568394 CHIC1Q5VXU3 224 aa32.19■■■□□ 2.74
AC009041.2-204ENST00000568394 MYO15BQ96JP2 1530 aa32.08■■■□□ 2.73
AC009041.2-204ENST00000568394 LOC105371045A0A1W2PR82 267 aa31.95■■■□□ 2.71
AC009041.2-204ENST00000568394 PELP1Q8IZL8 1130 aaKnown RBP31.75■■■□□ 2.67
AC009041.2-204ENST00000568394 ZCCHC6Q5VYS8 1495 aaKnown RBP31.7■■■□□ 2.67
AC009041.2-204ENST00000568394 FAM9AQ8IZU1 332 aaPredicted RBP31.62■■■□□ 2.65
AC009041.2-204ENST00000568394 TRIM26Q12899 539 aaPredicted RBP31.49■■■□□ 2.63
AC009041.2-204ENST00000568394 SCAF1Q9H7N4 1312 aaKnown RBP31.47■■■□□ 2.63
AC009041.2-204ENST00000568394 ABCC9O60706 1549 aa31.31■■■□□ 2.6
AC009041.2-204ENST00000568394 CCDC180Q9P1Z9 1646 aa31.17■■■□□ 2.58
AC009041.2-204ENST00000568394 ZEB1P37275 1124 aaPredicted RBP31.11■■■□□ 2.57
AC009041.2-204ENST00000568394 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
AC009041.2-204ENST00000568394 TTBK1Q5TCY1 1321 aaPredicted RBP30.93■■■□□ 2.54
AC009041.2-204ENST00000568394 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
AC009041.2-204ENST00000568394 TRIM41Q8WV44 630 aa30.83■■■□□ 2.53
AC009041.2-204ENST00000568394 NEUROD1Q13562 356 aa30.74■■■□□ 2.51
AC009041.2-204ENST00000568394 GTF3C3Q9Y5Q9 886 aa30.73■■■□□ 2.51
AC009041.2-204ENST00000568394 ACIN1Q9UKV3 1341 aaKnown RBP30.67■■■□□ 2.5
AC009041.2-204ENST00000568394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.67■■■□□ 2.5
AC009041.2-204ENST00000568394 CCER1Q8TC90 406 aaPredicted RBP30.64■■■□□ 2.5
AC009041.2-204ENST00000568394 PABPN1Q86U42 306 aaKnown RBP eCLIP30.63■■■□□ 2.49
AC009041.2-204ENST00000568394 YTHDC1Q96MU7 727 aaKnown RBP30.54■■■□□ 2.48
AC009041.2-204ENST00000568394 CENPBP07199 599 aaPredicted RBP30.53■■■□□ 2.48
AC009041.2-204ENST00000568394 DIEXFQ68CQ4 756 aaKnown RBP30.4■■■□□ 2.46
AC009041.2-204ENST00000568394 MYT1Q01538 1121 aa30.39■■■□□ 2.46
AC009041.2-204ENST00000568394 RANGAP1P46060 587 aaPredicted RBP30.35■■■□□ 2.45
AC009041.2-204ENST00000568394 CECR2Q9BXF3 1484 aa30.29■■■□□ 2.44
AC009041.2-204ENST00000568394 RSF1Q96T23 1441 aaPredicted RBP30.27■■■□□ 2.44
AC009041.2-204ENST00000568394 RB1CC1Q8TDY2 1594 aa29.98■■■□□ 2.39
AC009041.2-204ENST00000568394 MROH2BQ7Z745 1585 aa29.83■■■□□ 2.37
AC009041.2-204ENST00000568394 UBTFP17480 764 aaKnown RBP29.76■■■□□ 2.35
AC009041.2-204ENST00000568394 ZNF316A6NFI3 1004 aaPredicted RBP29.63■■■□□ 2.33
AC009041.2-204ENST00000568394 WIZO95785 1651 aa29.61■■■□□ 2.33
AC009041.2-204ENST00000568394 MIER1Q8N108 512 aa29.6■■■□□ 2.33
AC009041.2-204ENST00000568394 HNRNPUL2Q1KMD3 747 aaKnown RBP29.5■■■□□ 2.31
AC009041.2-204ENST00000568394 NACADO15069 1562 aa29.37■■■□□ 2.29
AC009041.2-204ENST00000568394 ABCC8Q09428 1581 aa29.37■■■□□ 2.29
AC009041.2-204ENST00000568394 SOGA1O94964 1423 aa29.18■■■□□ 2.26
AC009041.2-204ENST00000568394 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
AC009041.2-204ENST00000568394 BCANQ96GW7 911 aa29.14■■■□□ 2.26
AC009041.2-204ENST00000568394 RUSC2Q8N2Y8 1516 aa29.08■■■□□ 2.25
AC009041.2-204ENST00000568394 CSRNP3Q8WYN3 585 aa29.05■■■□□ 2.24
AC009041.2-204ENST00000568394 SUPT16HQ9Y5B9 1047 aaKnown RBP28.99■■■□□ 2.23
AC009041.2-204ENST00000568394 ITGAEP38570 1179 aa28.96■■■□□ 2.23
AC009041.2-204ENST00000568394 BAZ1AQ9NRL2 1556 aaPredicted RBP28.94■■■□□ 2.22
AC009041.2-204ENST00000568394 ATP1B4Q9UN42 357 aaPredicted RBP28.92■■■□□ 2.22
AC009041.2-204ENST00000568394 APLP2Q06481 763 aa28.92■■■□□ 2.22
AC009041.2-204ENST00000568394 BCL11AQ9H165 835 aa28.92■■■□□ 2.22
AC009041.2-204ENST00000568394 ANP32EQ9BTT0 268 aa28.87■■■□□ 2.21
AC009041.2-204ENST00000568394 TSHZ2Q9NRE2 1034 aa28.82■■■□□ 2.2
AC009041.2-204ENST00000568394 CEP162Q5TB80 1403 aa28.82■■■□□ 2.2
AC009041.2-204ENST00000568394 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
AC009041.2-204ENST00000568394 P3H3Q8IVL6 736 aa28.68■■■□□ 2.18
AC009041.2-204ENST00000568394 WRNQ14191 1432 aaPredicted RBP eCLIP28.61■■■□□ 2.17
AC009041.2-204ENST00000568394 FKBP8Q14318 412 aa28.61■■■□□ 2.17
AC009041.2-204ENST00000568394 SMARCA2P51531 1590 aa28.6■■■□□ 2.17
AC009041.2-204ENST00000568394 TOP2AP11388 1531 aaKnown RBP28.59■■■□□ 2.17
AC009041.2-204ENST00000568394 KCNH8Q96L42 1107 aa28.56■■■□□ 2.16
AC009041.2-204ENST00000568394 BAZ1BQ9UIG0 1483 aaKnown RBP28.51■■■□□ 2.15
AC009041.2-204ENST00000568394 UNC13AQ9UPW8 1703 aa28.51■■■□□ 2.15
AC009041.2-204ENST00000568394 NEFLP07196 543 aa28.47■■■□□ 2.15
AC009041.2-204ENST00000568394 BICRAQ9NZM4 1560 aa28.43■■■□□ 2.14
AC009041.2-204ENST00000568394 TNIKQ9UKE5 1360 aa28.41■■■□□ 2.14
AC009041.2-204ENST00000568394 ERICH6Q7L0X2 663 aa28.39■■■□□ 2.13
AC009041.2-204ENST00000568394 CLSPNQ9HAW4 1339 aa28.38■■■□□ 2.13
AC009041.2-204ENST00000568394 ATAD2BQ9ULI0 1458 aa28.36■■■□□ 2.13
AC009041.2-204ENST00000568394 ARID3CA6NKF2 412 aa28.34■■■□□ 2.13
AC009041.2-204ENST00000568394 TRIM52Q96A61 297 aa28.31■■■□□ 2.12
AC009041.2-204ENST00000568394 CLIP1P30622 1438 aa28.31■■■□□ 2.12
AC009041.2-204ENST00000568394 DDX10Q13206 875 aaKnown RBP28.28■■■□□ 2.12
AC009041.2-204ENST00000568394 RBM19Q9Y4C8 960 aaKnown RBP28.26■■■□□ 2.12
AC009041.2-204ENST00000568394 RAPGEF2Q9Y4G8 1499 aa28.26■■■□□ 2.11
AC009041.2-204ENST00000568394 KANK4Q5T7N3 995 aaPredicted RBP28.26■■■□□ 2.11
AC009041.2-204ENST00000568394 HIRIP3Q9BW71 556 aaPredicted RBP28.25■■■□□ 2.11
AC009041.2-204ENST00000568394 DNAJC5BQ9UF47 199 aa28.21■■■□□ 2.11
AC009041.2-204ENST00000568394 SYNJ1O43426 1573 aa28.2■■■□□ 2.1
AC009041.2-204ENST00000568394 GOLGA3Q08378 1498 aa28.19■■■□□ 2.1
AC009041.2-204ENST00000568394 IRX6P78412 446 aaPredicted RBP28.15■■■□□ 2.1
AC009041.2-204ENST00000568394 FAM50AQ14320 339 aaKnown RBP28.12■■■□□ 2.09
AC009041.2-204ENST00000568394 EIF4G1Q04637 1599 aaKnown RBP28.09■■■□□ 2.09
AC009041.2-204ENST00000568394 DHX57Q6P158 1386 aaKnown RBP28■■■□□ 2.07
AC009041.2-204ENST00000568394 CEP164Q9UPV0 1460 aa27.96■■■□□ 2.07
AC009041.2-204ENST00000568394 MSH5O43196 834 aa27.87■■■□□ 2.05
AC009041.2-204ENST00000568394 ANP32CO43423 234 aa27.86■■■□□ 2.05
AC009041.2-204ENST00000568394 CDK11AQ9UQ88 783 aaPredicted RBP27.86■■■□□ 2.05
AC009041.2-204ENST00000568394 SIN3AQ96ST3 1273 aa27.86■■■□□ 2.05
AC009041.2-204ENST00000568394 EEA1Q15075 1411 aa27.85■■■□□ 2.05
AC009041.2-204ENST00000568394 VPS8Q8N3P4 1428 aa27.85■■■□□ 2.05
AC009041.2-204ENST00000568394 CUX2O14529 1486 aa27.79■■■□□ 2.04
AC009041.2-204ENST00000568394 CNGB1Q14028 1251 aaPredicted RBP27.79■■■□□ 2.04
AC009041.2-204ENST00000568394 NBR1Q14596 966 aa27.78■■■□□ 2.04
AC009041.2-204ENST00000568394 HNRNPUQ00839 825 aaKnown RBP eCLIP27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms