RNA–Protein interactions for RNA: ENST00000564139.5

E4F1-204, Transcript of E4F transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene E4F1, Length 2,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-204ENST00000564139 NISCHQ9Y2I1 1504 aa40.26■■■■■ 4.04
E4F1-204ENST00000564139 SHROOM4Q9ULL8 1493 aa34.87■■■■□ 3.17
E4F1-204ENST00000564139 SUPT5HO00267 1087 aaKnown RBP34.53■■■■□ 3.12
E4F1-204ENST00000564139 ZCCHC6Q5VYS8 1495 aaKnown RBP34.22■■■■□ 3.07
E4F1-204ENST00000564139 HRCP23327 699 aa34.2■■■■□ 3.07
E4F1-204ENST00000564139 MYO15BQ96JP2 1530 aa34.05■■■■□ 3.04
E4F1-204ENST00000564139 CHIC1Q5VXU3 224 aa33.95■■■■□ 3.03
E4F1-204ENST00000564139 CCDC180Q9P1Z9 1646 aa33.87■■■■□ 3.01
E4F1-204ENST00000564139 PCGF6Q9BYE7 350 aa33.64■■■□□ 2.98
E4F1-204ENST00000564139 DCAF1Q9Y4B6 1507 aa33.36■■■□□ 2.93
E4F1-204ENST00000564139 PPARGC1BQ86YN6 1023 aaKnown RBP33.34■■■□□ 2.93
E4F1-204ENST00000564139 DCAF8L2P0C7V8 631 aa33.14■■■□□ 2.9
E4F1-204ENST00000564139 LOC105371045A0A1W2PR82 267 aa32.96■■■□□ 2.87
E4F1-204ENST00000564139 TRIM26Q12899 539 aaPredicted RBP32.85■■■□□ 2.85
E4F1-204ENST00000564139 ZEB1P37275 1124 aaPredicted RBP32.48■■■□□ 2.79
E4F1-204ENST00000564139 ABCC9O60706 1549 aa32.44■■■□□ 2.78
E4F1-204ENST00000564139 PELP1Q8IZL8 1130 aaKnown RBP32.26■■■□□ 2.76
E4F1-204ENST00000564139 RSF1Q96T23 1441 aaPredicted RBP32.15■■■□□ 2.74
E4F1-204ENST00000564139 TRIM41Q8WV44 630 aa32.11■■■□□ 2.73
E4F1-204ENST00000564139 SCAF1Q9H7N4 1312 aaKnown RBP31.97■■■□□ 2.71
E4F1-204ENST00000564139 RB1CC1Q8TDY2 1594 aa31.94■■■□□ 2.7
E4F1-204ENST00000564139 SCRIBQ14160 1630 aa31.9■■■□□ 2.7
E4F1-204ENST00000564139 FAM9AQ8IZU1 332 aaPredicted RBP31.88■■■□□ 2.69
E4F1-204ENST00000564139 EHMT2Q96KQ7 1210 aa31.58■■■□□ 2.65
E4F1-204ENST00000564139 ACIN1Q9UKV3 1341 aaKnown RBP31.42■■■□□ 2.62
E4F1-204ENST00000564139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.37■■■□□ 2.61
E4F1-204ENST00000564139 CECR2Q9BXF3 1484 aa31.37■■■□□ 2.61
E4F1-204ENST00000564139 CCER1Q8TC90 406 aaPredicted RBP31.35■■■□□ 2.61
E4F1-204ENST00000564139 MROH2BQ7Z745 1585 aa31.34■■■□□ 2.61
E4F1-204ENST00000564139 NEUROD1Q13562 356 aa31.29■■■□□ 2.6
E4F1-204ENST00000564139 WIZO95785 1651 aa31.21■■■□□ 2.59
E4F1-204ENST00000564139 DIEXFQ68CQ4 756 aaKnown RBP31.16■■■□□ 2.58
E4F1-204ENST00000564139 EIF4G1Q04637 1599 aaKnown RBP31.16■■■□□ 2.58
E4F1-204ENST00000564139 NACADO15069 1562 aa31.14■■■□□ 2.58
E4F1-204ENST00000564139 CENPBP07199 599 aaPredicted RBP31.13■■■□□ 2.57
E4F1-204ENST00000564139 BAZ1AQ9NRL2 1556 aaPredicted RBP31.1■■■□□ 2.57
E4F1-204ENST00000564139 WRNQ14191 1432 aaPredicted RBP eCLIP31.07■■■□□ 2.56
E4F1-204ENST00000564139 GTF3C3Q9Y5Q9 886 aa31.06■■■□□ 2.56
E4F1-204ENST00000564139 CEP162Q5TB80 1403 aa30.88■■■□□ 2.53
E4F1-204ENST00000564139 MYT1Q01538 1121 aa30.87■■■□□ 2.53
E4F1-204ENST00000564139 CCDC88BA6NC98 1476 aa30.81■■■□□ 2.52
E4F1-204ENST00000564139 ABCC8Q09428 1581 aa30.79■■■□□ 2.52
E4F1-204ENST00000564139 TTBK1Q5TCY1 1321 aaPredicted RBP30.78■■■□□ 2.52
E4F1-204ENST00000564139 TNIKQ9UKE5 1360 aa30.77■■■□□ 2.52
E4F1-204ENST00000564139 TOP2AP11388 1531 aaKnown RBP30.74■■■□□ 2.51
E4F1-204ENST00000564139 ZNF316A6NFI3 1004 aaPredicted RBP30.74■■■□□ 2.51
E4F1-204ENST00000564139 SOGA1O94964 1423 aa30.65■■■□□ 2.5
E4F1-204ENST00000564139 EEA1Q15075 1411 aa30.63■■■□□ 2.49
E4F1-204ENST00000564139 SMARCA2P51531 1590 aa30.6■■■□□ 2.49
E4F1-204ENST00000564139 CSRNP3Q8WYN3 585 aa30.53■■■□□ 2.48
E4F1-204ENST00000564139 SMARCA4P51532 1647 aa30.52■■■□□ 2.48
E4F1-204ENST00000564139 UBTFP17480 764 aaKnown RBP30.48■■■□□ 2.47
E4F1-204ENST00000564139 GOLGA3Q08378 1498 aa30.47■■■□□ 2.47
E4F1-204ENST00000564139 RUSC2Q8N2Y8 1516 aa30.46■■■□□ 2.47
E4F1-204ENST00000564139 YTHDC1Q96MU7 727 aaKnown RBP30.45■■■□□ 2.47
E4F1-204ENST00000564139 MIER1Q8N108 512 aa30.38■■■□□ 2.45
E4F1-204ENST00000564139 HNRNPUL2Q1KMD3 747 aaKnown RBP30.25■■■□□ 2.43
E4F1-204ENST00000564139 CEP164Q9UPV0 1460 aa30.21■■■□□ 2.43
E4F1-204ENST00000564139 KIF21BO75037 1637 aa30.19■■■□□ 2.42
E4F1-204ENST00000564139 CLIP1P30622 1438 aa30.14■■■□□ 2.42
E4F1-204ENST00000564139 VPS8Q8N3P4 1428 aa30.11■■■□□ 2.41
E4F1-204ENST00000564139 UNC13AQ9UPW8 1703 aa30.06■■■□□ 2.4
E4F1-204ENST00000564139 SYNJ1O43426 1573 aa30.02■■■□□ 2.4
E4F1-204ENST00000564139 BAZ1BQ9UIG0 1483 aaKnown RBP30.01■■■□□ 2.39
E4F1-204ENST00000564139 APLP2Q06481 763 aa29.97■■■□□ 2.39
E4F1-204ENST00000564139 CLSPNQ9HAW4 1339 aa29.93■■■□□ 2.38
E4F1-204ENST00000564139 PEG3Q9GZU2 1588 aa29.88■■■□□ 2.37
E4F1-204ENST00000564139 RAPGEF2Q9Y4G8 1499 aa29.88■■■□□ 2.37
E4F1-204ENST00000564139 DHX57Q6P158 1386 aaKnown RBP29.81■■■□□ 2.36
E4F1-204ENST00000564139 SUPT16HQ9Y5B9 1047 aaKnown RBP29.76■■■□□ 2.35
E4F1-204ENST00000564139 RANGAP1P46060 587 aaPredicted RBP29.66■■■□□ 2.34
E4F1-204ENST00000564139 BICRAQ9NZM4 1560 aa29.65■■■□□ 2.34
E4F1-204ENST00000564139 ARAP1Q96P48 1450 aa29.58■■■□□ 2.33
E4F1-204ENST00000564139 PABPN1Q86U42 306 aaKnown RBP eCLIP29.58■■■□□ 2.333e-6■■■■□ 23.3
E4F1-204ENST00000564139 TOP2BQ02880 1626 aa29.58■■■□□ 2.33
E4F1-204ENST00000564139 ERICH3Q5RHP9 1530 aa29.57■■■□□ 2.32
E4F1-204ENST00000564139 ATAD2BQ9ULI0 1458 aa29.55■■■□□ 2.32
E4F1-204ENST00000564139 RRBP1Q9P2E9 1410 aaKnown RBP29.53■■■□□ 2.32
E4F1-204ENST00000564139 CUX2O14529 1486 aa29.5■■■□□ 2.31
E4F1-204ENST00000564139 PRXQ9BXM0 1461 aa29.5■■■□□ 2.31
E4F1-204ENST00000564139 KANK4Q5T7N3 995 aaPredicted RBP29.5■■■□□ 2.31
E4F1-204ENST00000564139 TSHZ2Q9NRE2 1034 aa29.48■■■□□ 2.31
E4F1-204ENST00000564139 BIVM-ERCC5R4GMW8 1640 aa29.46■■■□□ 2.31
E4F1-204ENST00000564139 CCNB3Q8WWL7 1395 aa29.35■■■□□ 2.29
E4F1-204ENST00000564139 ANP32EQ9BTT0 268 aa29.3■■■□□ 2.28
E4F1-204ENST00000564139 KCNH8Q96L42 1107 aa29.23■■■□□ 2.27
E4F1-204ENST00000564139 MAPKBP1O60336 1514 aa29.21■■■□□ 2.27
E4F1-204ENST00000564139 ARHGAP35Q9NRY4 1499 aa29.19■■■□□ 2.26
E4F1-204ENST00000564139 RAB3GAP2Q9H2M9 1393 aa29.19■■■□□ 2.26
E4F1-204ENST00000564139 KIF27Q86VH2 1401 aa29.18■■■□□ 2.26
E4F1-204ENST00000564139 ITGAEP38570 1179 aa29.15■■■□□ 2.26
E4F1-204ENST00000564139 CUX1P39880 1505 aa29.14■■■□□ 2.25
E4F1-204ENST00000564139 BCANQ96GW7 911 aa29.06■■■□□ 2.24
E4F1-204ENST00000564139 FKBP8Q14318 412 aa29.05■■■□□ 2.24
E4F1-204ENST00000564139 SETD5Q9C0A6 1442 aa29.04■■■□□ 2.24
E4F1-204ENST00000564139 MAP3K1Q13233 1512 aa29.03■■■□□ 2.24
E4F1-204ENST00000564139 WDR97A6NE52 1622 aa29.02■■■□□ 2.24
E4F1-204ENST00000564139 TIAM1Q13009 1591 aa29.02■■■□□ 2.24
E4F1-204ENST00000564139 DDX10Q13206 875 aaKnown RBP29■■■□□ 2.23
E4F1-204ENST00000564139 PPP1R15AO75807 674 aaPredicted RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms