RNA–Protein interactions for RNA: ENST00000522362.6

PNMA2-204, Transcript of PNMA family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNMA2, Length 4,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA2-204ENST00000522362 NISCHQ9Y2I1 1504 aa39.25■■■■□ 3.87
PNMA2-204ENST00000522362 DCAF8L2P0C7V8 631 aa36.77■■■■□ 3.48
PNMA2-204ENST00000522362 SHROOM4Q9ULL8 1493 aa35.28■■■■□ 3.24
PNMA2-204ENST00000522362 SUPT5HO00267 1087 aaKnown RBP35.14■■■■□ 3.22
PNMA2-204ENST00000522362 EHMT2Q96KQ7 1210 aa33.02■■■□□ 2.88
PNMA2-204ENST00000522362 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.87
PNMA2-204ENST00000522362 ABCC9O60706 1549 aa32.95■■■□□ 2.87
PNMA2-204ENST00000522362 FAM9AQ8IZU1 332 aaPredicted RBP32.82■■■□□ 2.84
PNMA2-204ENST00000522362 TRIM41Q8WV44 630 aa32.79■■■□□ 2.84
PNMA2-204ENST00000522362 ZCCHC6Q5VYS8 1495 aaKnown RBP32.72■■■□□ 2.83
PNMA2-204ENST00000522362 CHIC1Q5VXU3 224 aa32.31■■■□□ 2.76
PNMA2-204ENST00000522362 APLP2Q06481 763 aa32.27■■■□□ 2.76
PNMA2-204ENST00000522362 PCGF6Q9BYE7 350 aa32.12■■■□□ 2.73
PNMA2-204ENST00000522362 PABPN1Q86U42 306 aaKnown RBP eCLIP32.07■■■□□ 2.72
PNMA2-204ENST00000522362 UBTFP17480 764 aaKnown RBP31.94■■■□□ 2.7
PNMA2-204ENST00000522362 SCRIBQ14160 1630 aa31.93■■■□□ 2.7
PNMA2-204ENST00000522362 TTBK1Q5TCY1 1321 aaPredicted RBP31.83■■■□□ 2.69
PNMA2-204ENST00000522362 RANGAP1P46060 587 aaPredicted RBP31.8■■■□□ 2.68
PNMA2-204ENST00000522362 LOC105371045A0A1W2PR82 267 aa31.7■■■□□ 2.67
PNMA2-204ENST00000522362 DCAF1Q9Y4B6 1507 aa31.6■■■□□ 2.65
PNMA2-204ENST00000522362 NACADO15069 1562 aa31.5■■■□□ 2.63
PNMA2-204ENST00000522362 RB1CC1Q8TDY2 1594 aa31.49■■■□□ 2.63
PNMA2-204ENST00000522362 ZEB1P37275 1124 aaPredicted RBP31.4■■■□□ 2.62
PNMA2-204ENST00000522362 TRIM26Q12899 539 aaPredicted RBP31.37■■■□□ 2.61
PNMA2-204ENST00000522362 ATP1B4Q9UN42 357 aaPredicted RBP31.32■■■□□ 2.6
PNMA2-204ENST00000522362 PPARGC1BQ86YN6 1023 aaKnown RBP31.26■■■□□ 2.59
PNMA2-204ENST00000522362 CCER1Q8TC90 406 aaPredicted RBP31.26■■■□□ 2.59
PNMA2-204ENST00000522362 RSF1Q96T23 1441 aaPredicted RBP31.08■■■□□ 2.57
PNMA2-204ENST00000522362 HRCP23327 699 aa30.86■■■□□ 2.53
PNMA2-204ENST00000522362 MYO15BQ96JP2 1530 aa30.85■■■□□ 2.53
PNMA2-204ENST00000522362 CSRNP3Q8WYN3 585 aa30.74■■■□□ 2.51
PNMA2-204ENST00000522362 BAZ1AQ9NRL2 1556 aaPredicted RBP30.66■■■□□ 2.5
PNMA2-204ENST00000522362 CECR2Q9BXF3 1484 aa30.64■■■□□ 2.5
PNMA2-204ENST00000522362 HNRNPUL2Q1KMD3 747 aaKnown RBP30.55■■■□□ 2.48
PNMA2-204ENST00000522362 ITGAEP38570 1179 aa30.49■■■□□ 2.47
PNMA2-204ENST00000522362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.43■■■□□ 2.46
PNMA2-204ENST00000522362 BAZ1BQ9UIG0 1483 aaKnown RBP30.4■■■□□ 2.46
PNMA2-204ENST00000522362 MROH2BQ7Z745 1585 aa30.35■■■□□ 2.45
PNMA2-204ENST00000522362 CENPBP07199 599 aaPredicted RBP30.27■■■□□ 2.44
PNMA2-204ENST00000522362 PELP1Q8IZL8 1130 aaKnown RBP30.17■■■□□ 2.42
PNMA2-204ENST00000522362 WRNQ14191 1432 aaPredicted RBP eCLIP30.15■■■□□ 2.42
PNMA2-204ENST00000522362 EEA1Q15075 1411 aa30.13■■■□□ 2.41
PNMA2-204ENST00000522362 FAM50AQ14320 339 aaKnown RBP30.08■■■□□ 2.41
PNMA2-204ENST00000522362 P3H3Q8IVL6 736 aa29.99■■■□□ 2.39
PNMA2-204ENST00000522362 CCDC88BA6NC98 1476 aa29.97■■■□□ 2.39
PNMA2-204ENST00000522362 FBLN2P98095 1184 aa29.97■■■□□ 2.39
PNMA2-204ENST00000522362 WIZO95785 1651 aa29.95■■■□□ 2.39
PNMA2-204ENST00000522362 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
PNMA2-204ENST00000522362 TOP2AP11388 1531 aaKnown RBP29.9■■■□□ 2.38
PNMA2-204ENST00000522362 GOLGA3Q08378 1498 aa29.88■■■□□ 2.37
PNMA2-204ENST00000522362 CLIP1P30622 1438 aa29.81■■■□□ 2.36
PNMA2-204ENST00000522362 SMARCA4P51532 1647 aa29.8■■■□□ 2.36
PNMA2-204ENST00000522362 YTHDC1Q96MU7 727 aaKnown RBP29.8■■■□□ 2.36
PNMA2-204ENST00000522362 MYT1LQ9UL68 1186 aa29.76■■■□□ 2.35
PNMA2-204ENST00000522362 CEP162Q5TB80 1403 aa29.76■■■□□ 2.35
PNMA2-204ENST00000522362 KIF27Q86VH2 1401 aa29.72■■■□□ 2.35
PNMA2-204ENST00000522362 TNIKQ9UKE5 1360 aa29.72■■■□□ 2.35
PNMA2-204ENST00000522362 CEP164Q9UPV0 1460 aa29.71■■■□□ 2.35
PNMA2-204ENST00000522362 ATAD2BQ9ULI0 1458 aa29.64■■■□□ 2.34
PNMA2-204ENST00000522362 ABCC8Q09428 1581 aa29.63■■■□□ 2.33
PNMA2-204ENST00000522362 TRIM52Q96A61 297 aa29.62■■■□□ 2.33
PNMA2-204ENST00000522362 DIEXFQ68CQ4 756 aaKnown RBP29.61■■■□□ 2.33
PNMA2-204ENST00000522362 SOGA1O94964 1423 aa29.6■■■□□ 2.33
PNMA2-204ENST00000522362 ARID3CA6NKF2 412 aa29.57■■■□□ 2.32
PNMA2-204ENST00000522362 CDK11AQ9UQ88 783 aaPredicted RBP29.53■■■□□ 2.32
PNMA2-204ENST00000522362 NEUROD1Q13562 356 aa29.52■■■□□ 2.32
PNMA2-204ENST00000522362 NEFLP07196 543 aa29.38■■■□□ 2.29
PNMA2-204ENST00000522362 POLR3GLQ9BT43 218 aa29.37■■■□□ 2.29
PNMA2-204ENST00000522362 CUX2O14529 1486 aa29.35■■■□□ 2.29
PNMA2-204ENST00000522362 CHMP7Q8WUX9 453 aaPredicted RBP29.34■■■□□ 2.29
PNMA2-204ENST00000522362 ZNF316A6NFI3 1004 aaPredicted RBP29.33■■■□□ 2.29
PNMA2-204ENST00000522362 CADPSQ9ULU8 1353 aa29.28■■■□□ 2.28
PNMA2-204ENST00000522362 MTUS2Q5JR59 1369 aa29.28■■■□□ 2.28
PNMA2-204ENST00000522362 ZNF777Q9ULD5 760 aaPredicted RBP29.25■■■□□ 2.27
PNMA2-204ENST00000522362 CARMIL1Q5VZK9 1371 aa29.25■■■□□ 2.27
PNMA2-204ENST00000522362 PDS5BQ9NTI5 1447 aa29.19■■■□□ 2.26
PNMA2-204ENST00000522362 ERCC6Q03468 1493 aa29.18■■■□□ 2.26
PNMA2-204ENST00000522362 NCAPD3P42695 1498 aa29.1■■■□□ 2.25
PNMA2-204ENST00000522362 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
PNMA2-204ENST00000522362 VPS8Q8N3P4 1428 aa29.04■■■□□ 2.24
PNMA2-204ENST00000522362 ZNF326Q5BKZ1 582 aaKnown RBP29.01■■■□□ 2.24
PNMA2-204ENST00000522362 FHAD1B1AJZ9 1412 aa29.01■■■□□ 2.23
PNMA2-204ENST00000522362 CNGB1Q14028 1251 aaPredicted RBP29■■■□□ 2.23
PNMA2-204ENST00000522362 CHIC2Q9UKJ5 165 aa28.98■■■□□ 2.23
PNMA2-204ENST00000522362 TONSLQ96HA7 1378 aa28.95■■■□□ 2.23
PNMA2-204ENST00000522362 RUSC2Q8N2Y8 1516 aa28.93■■■□□ 2.22
PNMA2-204ENST00000522362 ANP32CO43423 234 aa28.91■■■□□ 2.22
PNMA2-204ENST00000522362 TDRD9Q8NDG6 1382 aaKnown RBP28.89■■■□□ 2.22
PNMA2-204ENST00000522362 FANCD2Q9BXW9 1451 aa28.89■■■□□ 2.22
PNMA2-204ENST00000522362 RAPGEF2Q9Y4G8 1499 aa28.87■■■□□ 2.21
PNMA2-204ENST00000522362 BICRAQ9NZM4 1560 aa28.86■■■□□ 2.21
PNMA2-204ENST00000522362 NPM1P06748 294 aaKnown RBP eCLIP28.82■■■□□ 2.2
PNMA2-204ENST00000522362 PLEKHD1A6NEE1 506 aa28.81■■■□□ 2.2
PNMA2-204ENST00000522362 TSPY4P0CV99 314 aa28.81■■■□□ 2.2
PNMA2-204ENST00000522362 TSPY10P0CW01 314 aa28.81■■■□□ 2.2
PNMA2-204ENST00000522362 CCNB3Q8WWL7 1395 aa28.76■■■□□ 2.2
PNMA2-204ENST00000522362 RRP7BPQ9NSQ0 103 aa28.72■■■□□ 2.19
PNMA2-204ENST00000522362 HMGXB3Q12766 1538 aa28.72■■■□□ 2.19
PNMA2-204ENST00000522362 KANK4Q5T7N3 995 aaPredicted RBP28.67■■■□□ 2.18
PNMA2-204ENST00000522362 SLC4A1APQ9BWU0 796 aaKnown RBP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms