RNA–Protein interactions for RNA: ENST00000612482.4

SREBF2-209, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 5 BASIC

Gene SREBF2, Length 5,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-209ENST00000612482 DCAF8L2P0C7V8 631 aa32.8■■■□□ 2.84
SREBF2-209ENST00000612482 SUPT5HO00267 1087 aaKnown RBP31.54■■■□□ 2.64
SREBF2-209ENST00000612482 SHROOM4Q9ULL8 1493 aa30.81■■■□□ 2.52
SREBF2-209ENST00000612482 NISCHQ9Y2I1 1504 aa30.73■■■□□ 2.51
SREBF2-209ENST00000612482 EHMT2Q96KQ7 1210 aa30.69■■■□□ 2.5
SREBF2-209ENST00000612482 PELP1Q8IZL8 1130 aaKnown RBP30.42■■■□□ 2.46
SREBF2-209ENST00000612482 APLP2Q06481 763 aa29.95■■■□□ 2.38
SREBF2-209ENST00000612482 PCGF6Q9BYE7 350 aa29.89■■■□□ 2.38
SREBF2-209ENST00000612482 FAM9AQ8IZU1 332 aaPredicted RBP29.81■■■□□ 2.36
SREBF2-209ENST00000612482 TTBK1Q5TCY1 1321 aaPredicted RBP29.72■■■□□ 2.35
SREBF2-209ENST00000612482 CENPBP07199 599 aaPredicted RBP29.44■■■□□ 2.3
SREBF2-209ENST00000612482 ZEB1P37275 1124 aaPredicted RBP29.31■■■□□ 2.28
SREBF2-209ENST00000612482 ERICH6Q7L0X2 663 aa29.26■■■□□ 2.27
SREBF2-209ENST00000612482 CCER1Q8TC90 406 aaPredicted RBP29.26■■■□□ 2.27
SREBF2-209ENST00000612482 RANGAP1P46060 587 aaPredicted RBP29.18■■■□□ 2.26
SREBF2-209ENST00000612482 TRIM41Q8WV44 630 aa29.1■■■□□ 2.25
SREBF2-209ENST00000612482 YTHDC1Q96MU7 727 aaKnown RBP28.89■■■□□ 2.21
SREBF2-209ENST00000612482 ATP1B4Q9UN42 357 aaPredicted RBP28.84■■■□□ 2.21
SREBF2-209ENST00000612482 UBTFP17480 764 aaKnown RBP28.78■■■□□ 2.2
SREBF2-209ENST00000612482 NEFLP07196 543 aa28.74■■■□□ 2.19
SREBF2-209ENST00000612482 MYT1Q01538 1121 aa28.62■■■□□ 2.17
SREBF2-209ENST00000612482 PPARGC1BQ86YN6 1023 aaKnown RBP28.61■■■□□ 2.17
SREBF2-209ENST00000612482 TRIM26Q12899 539 aaPredicted RBP28.45■■■□□ 2.14
SREBF2-209ENST00000612482 HRCP23327 699 aa28.38■■■□□ 2.13
SREBF2-209ENST00000612482 LOC105371045A0A1W2PR82 267 aa28.07■■■□□ 2.08
SREBF2-209ENST00000612482 ITGAEP38570 1179 aa28.04■■■□□ 2.08
SREBF2-209ENST00000612482 HNRNPUL2Q1KMD3 747 aaKnown RBP27.91■■■□□ 2.06
SREBF2-209ENST00000612482 CHIC1Q5VXU3 224 aa27.91■■■□□ 2.06
SREBF2-209ENST00000612482 POLR3GLQ9BT43 218 aa27.9■■■□□ 2.06
SREBF2-209ENST00000612482 DAXXQ9UER7 740 aaPredicted RBP27.9■■■□□ 2.06
SREBF2-209ENST00000612482 CNGB1Q14028 1251 aaPredicted RBP27.74■■■□□ 2.03
SREBF2-209ENST00000612482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.68■■■□□ 2.02
SREBF2-209ENST00000612482 DIEXFQ68CQ4 756 aaKnown RBP27.65■■■□□ 2.02
SREBF2-209ENST00000612482 MYT1LQ9UL68 1186 aa27.56■■■□□ 2
SREBF2-209ENST00000612482 RTL5Q5HYW3 569 aaPredicted RBP27.4■■□□□ 1.98
SREBF2-209ENST00000612482 ZNF316A6NFI3 1004 aaPredicted RBP27.29■■□□□ 1.96
SREBF2-209ENST00000612482 GTF3C3Q9Y5Q9 886 aa27.27■■□□□ 1.96
SREBF2-209ENST00000612482 CLSPNQ9HAW4 1339 aa27.26■■□□□ 1.95
SREBF2-209ENST00000612482 BCANQ96GW7 911 aa27.22■■□□□ 1.95
SREBF2-209ENST00000612482 SLC4A1APQ9BWU0 796 aaKnown RBP27.22■■□□□ 1.95
SREBF2-209ENST00000612482 FAM50AQ14320 339 aaKnown RBP27.21■■□□□ 1.95
SREBF2-209ENST00000612482 NEUROD1Q13562 356 aa27.13■■□□□ 1.93
SREBF2-209ENST00000612482 TRIM52Q96A61 297 aa27.07■■□□□ 1.92
SREBF2-209ENST00000612482 ANP32CO43423 234 aa26.96■■□□□ 1.91
SREBF2-209ENST00000612482 CDK11AQ9UQ88 783 aaPredicted RBP26.93■■□□□ 1.9
SREBF2-209ENST00000612482 ZNF326Q5BKZ1 582 aaKnown RBP26.84■■□□□ 1.89
SREBF2-209ENST00000612482 ACIN1Q9UKV3 1341 aaKnown RBP26.81■■□□□ 1.88
SREBF2-209ENST00000612482 PABPN1Q86U42 306 aaKnown RBP eCLIP26.63■■□□□ 1.853e-9■□□□□ 10
SREBF2-209ENST00000612482 ZBTB47Q9UFB7 747 aaPredicted RBP26.56■■□□□ 1.84
SREBF2-209ENST00000612482 CANXP27824 592 aaKnown RBP26.52■■□□□ 1.84
SREBF2-209ENST00000612482 BCL11AQ9H165 835 aa26.49■■□□□ 1.83
SREBF2-209ENST00000612482 ANP32AP39687 249 aaKnown RBP26.48■■□□□ 1.83
SREBF2-209ENST00000612482 P3H3Q8IVL6 736 aa26.41■■□□□ 1.82
SREBF2-209ENST00000612482 NPM2Q86SE8 214 aaKnown RBP26.41■■□□□ 1.82
SREBF2-209ENST00000612482 ABCC9O60706 1549 aa26.39■■□□□ 1.82
SREBF2-209ENST00000612482 CSRNP3Q8WYN3 585 aa26.39■■□□□ 1.82
SREBF2-209ENST00000612482 FKBP8Q14318 412 aa26.38■■□□□ 1.81
SREBF2-209ENST00000612482 ARID3CA6NKF2 412 aa26.34■■□□□ 1.81
SREBF2-209ENST00000612482 FBLN2P98095 1184 aa26.32■■□□□ 1.8
SREBF2-209ENST00000612482 SLC24A1O60721 1099 aa26.29■■□□□ 1.8
SREBF2-209ENST00000612482 NEFMP07197 916 aa26.24■■□□□ 1.79
SREBF2-209ENST00000612482 HNRNPUQ00839 825 aaKnown RBP eCLIP26.2■■□□□ 1.782e-14■■□□□ 13.6
SREBF2-209ENST00000612482 ZNF777Q9ULD5 760 aaPredicted RBP26.17■■□□□ 1.78
SREBF2-209ENST00000612482 DDX10Q13206 875 aaKnown RBP26.16■■□□□ 1.78
SREBF2-209ENST00000612482 EIF5BO60841 1220 aaKnown RBP26.15■■□□□ 1.78
SREBF2-209ENST00000612482 TONSLQ96HA7 1378 aa26.13■■□□□ 1.77
SREBF2-209ENST00000612482 FAM9BQ8IZU0 186 aa26.11■■□□□ 1.77
SREBF2-209ENST00000612482 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
SREBF2-209ENST00000612482 SALL2Q9Y467 1007 aaPredicted RBP26■■□□□ 1.75
SREBF2-209ENST00000612482 HSP90AA1P07900 732 aaKnown RBP25.98■■□□□ 1.75
SREBF2-209ENST00000612482 ANP32BQ92688 251 aaKnown RBP25.98■■□□□ 1.75
SREBF2-209ENST00000612482 SCAF1Q9H7N4 1312 aaKnown RBP25.98■■□□□ 1.75
SREBF2-209ENST00000612482 NBR1Q14596 966 aa25.95■■□□□ 1.74
SREBF2-209ENST00000612482 UPF2Q9HAU5 1272 aaKnown RBP25.94■■□□□ 1.74
SREBF2-209ENST00000612482 CCDC136Q96JN2 1154 aa25.93■■□□□ 1.74
SREBF2-209ENST00000612482 MIER1Q8N108 512 aa25.88■■□□□ 1.73
SREBF2-209ENST00000612482 TMC1Q8TDI8 760 aa25.85■■□□□ 1.73
SREBF2-209ENST00000612482 CHGAP10645 457 aaKnown RBP25.81■■□□□ 1.72
SREBF2-209ENST00000612482 IRX6P78412 446 aaPredicted RBP25.81■■□□□ 1.72
SREBF2-209ENST00000612482 CHIC2Q9UKJ5 165 aa25.8■■□□□ 1.72
SREBF2-209ENST00000612482 MRS2Q9HD23 443 aa25.79■■□□□ 1.72
SREBF2-209ENST00000612482 ARXQ96QS3 562 aa25.75■■□□□ 1.71
SREBF2-209ENST00000612482 HIRIP3Q9BW71 556 aaPredicted RBP25.73■■□□□ 1.71
SREBF2-209ENST00000612482 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.73■■□□□ 1.71
SREBF2-209ENST00000612482 WDR43Q15061 677 aaKnown RBP eCLIP25.66■■□□□ 1.71e-7■■■■■ 35
SREBF2-209ENST00000612482 GLIPR1L2Q4G1C9 344 aa25.66■■□□□ 1.7
SREBF2-209ENST00000612482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.63■■□□□ 1.691e-14■■■□□ 18.1
SREBF2-209ENST00000612482 STAG3Q9UJ98 1225 aa25.63■■□□□ 1.69
SREBF2-209ENST00000612482 KDM2AQ9Y2K7 1162 aa25.63■■□□□ 1.69
SREBF2-209ENST00000612482 SCRIBQ14160 1630 aa25.6■■□□□ 1.69
SREBF2-209ENST00000612482 ESF1Q9H501 851 aaKnown RBP25.58■■□□□ 1.68
SREBF2-209ENST00000612482 EIF4G2P78344 907 aaKnown RBP eCLIP25.5■■□□□ 1.67
SREBF2-209ENST00000612482 MTUS2Q5JR59 1369 aa25.48■■□□□ 1.67
SREBF2-209ENST00000612482 CLIP1P30622 1438 aa25.46■■□□□ 1.67
SREBF2-209ENST00000612482 TSPY4P0CV99 314 aa25.45■■□□□ 1.67
SREBF2-209ENST00000612482 TSPY10P0CW01 314 aa25.45■■□□□ 1.67
SREBF2-209ENST00000612482 ZCCHC6Q5VYS8 1495 aaKnown RBP25.42■■□□□ 1.66
SREBF2-209ENST00000612482 PLPPR3Q6T4P5 718 aa25.41■■□□□ 1.66
SREBF2-209ENST00000612482 MYO15BQ96JP2 1530 aa25.4■■□□□ 1.66
SREBF2-209ENST00000612482 RRP7BPQ9NSQ0 103 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms