RNA–Protein interactions for RNA: ENST00000551964.5

APAF1-210, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene APAF1, Length 5,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-210ENST00000551964 DCAF8L2P0C7V8 631 aa33.31■■■□□ 2.92
APAF1-210ENST00000551964 NISCHQ9Y2I1 1504 aa31.92■■■□□ 2.7
APAF1-210ENST00000551964 SUPT5HO00267 1087 aaKnown RBP31.78■■■□□ 2.68
APAF1-210ENST00000551964 SHROOM4Q9ULL8 1493 aa31.19■■■□□ 2.58
APAF1-210ENST00000551964 EHMT2Q96KQ7 1210 aa30.68■■■□□ 2.5
APAF1-210ENST00000551964 PELP1Q8IZL8 1130 aaKnown RBP30.3■■■□□ 2.44
APAF1-210ENST00000551964 APLP2Q06481 763 aa30.29■■■□□ 2.44
APAF1-210ENST00000551964 FAM9AQ8IZU1 332 aaPredicted RBP29.97■■■□□ 2.39
APAF1-210ENST00000551964 PCGF6Q9BYE7 350 aa29.77■■■□□ 2.36
APAF1-210ENST00000551964 TTBK1Q5TCY1 1321 aaPredicted RBP29.69■■■□□ 2.34
APAF1-210ENST00000551964 TRIM41Q8WV44 630 aa29.49■■■□□ 2.31
APAF1-210ENST00000551964 ZEB1P37275 1124 aaPredicted RBP29.44■■■□□ 2.3
APAF1-210ENST00000551964 RANGAP1P46060 587 aaPredicted RBP29.36■■■□□ 2.29
APAF1-210ENST00000551964 CENPBP07199 599 aaPredicted RBP29.31■■■□□ 2.28
APAF1-210ENST00000551964 CCER1Q8TC90 406 aaPredicted RBP29.29■■■□□ 2.28
APAF1-210ENST00000551964 ATP1B4Q9UN42 357 aaPredicted RBP29.13■■■□□ 2.25
APAF1-210ENST00000551964 UBTFP17480 764 aaKnown RBP29.12■■■□□ 2.25
APAF1-210ENST00000551964 ERICH6Q7L0X2 663 aa28.99■■■□□ 2.23
APAF1-210ENST00000551964 NEFLP07196 543 aa28.68■■■□□ 2.18
APAF1-210ENST00000551964 YTHDC1Q96MU7 727 aaKnown RBP28.62■■■□□ 2.17
APAF1-210ENST00000551964 PPARGC1BQ86YN6 1023 aaKnown RBP28.59■■■□□ 2.17
APAF1-210ENST00000551964 TRIM26Q12899 539 aaPredicted RBP28.58■■■□□ 2.17
APAF1-210ENST00000551964 HRCP23327 699 aa28.26■■■□□ 2.11
APAF1-210ENST00000551964 CHIC1Q5VXU3 224 aa28.21■■■□□ 2.11
APAF1-210ENST00000551964 LOC105371045A0A1W2PR82 267 aa28.18■■■□□ 2.1
APAF1-210ENST00000551964 ITGAEP38570 1179 aa28.18■■■□□ 2.1
APAF1-210ENST00000551964 MYT1Q01538 1121 aa28.17■■■□□ 2.1
APAF1-210ENST00000551964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.09■■■□□ 2.09
APAF1-210ENST00000551964 HNRNPUL2Q1KMD3 747 aaKnown RBP28.09■■■□□ 2.09
APAF1-210ENST00000551964 MYT1LQ9UL68 1186 aa27.97■■■□□ 2.07
APAF1-210ENST00000551964 POLR3GLQ9BT43 218 aa27.96■■■□□ 2.07
APAF1-210ENST00000551964 DAXXQ9UER7 740 aaPredicted RBP27.81■■■□□ 2.04
APAF1-210ENST00000551964 CNGB1Q14028 1251 aaPredicted RBP27.63■■■□□ 2.01
APAF1-210ENST00000551964 DIEXFQ68CQ4 756 aaKnown RBP27.58■■■□□ 2.01
APAF1-210ENST00000551964 FAM50AQ14320 339 aaKnown RBP27.51■■□□□ 1.99
APAF1-210ENST00000551964 ABCC9O60706 1549 aa27.41■■□□□ 1.98
APAF1-210ENST00000551964 SLC4A1APQ9BWU0 796 aaKnown RBP27.4■■□□□ 1.98
APAF1-210ENST00000551964 PABPN1Q86U42 306 aaKnown RBP eCLIP27.39■■□□□ 1.98
APAF1-210ENST00000551964 TRIM52Q96A61 297 aa27.36■■□□□ 1.97
APAF1-210ENST00000551964 NEUROD1Q13562 356 aa27.27■■□□□ 1.96
APAF1-210ENST00000551964 CLSPNQ9HAW4 1339 aa27.21■■□□□ 1.95
APAF1-210ENST00000551964 ZNF316A6NFI3 1004 aaPredicted RBP27.18■■□□□ 1.94
APAF1-210ENST00000551964 RTL5Q5HYW3 569 aaPredicted RBP27.17■■□□□ 1.94
APAF1-210ENST00000551964 ANP32CO43423 234 aa27.08■■□□□ 1.93
APAF1-210ENST00000551964 ZNF326Q5BKZ1 582 aaKnown RBP27.01■■□□□ 1.91
APAF1-210ENST00000551964 GTF3C3Q9Y5Q9 886 aa26.96■■□□□ 1.91
APAF1-210ENST00000551964 BCANQ96GW7 911 aa26.95■■□□□ 1.9
APAF1-210ENST00000551964 CSRNP3Q8WYN3 585 aa26.9■■□□□ 1.9
APAF1-210ENST00000551964 FBLN2P98095 1184 aa26.89■■□□□ 1.89
APAF1-210ENST00000551964 CDK11AQ9UQ88 783 aaPredicted RBP26.83■■□□□ 1.89
APAF1-210ENST00000551964 P3H3Q8IVL6 736 aa26.78■■□□□ 1.88
APAF1-210ENST00000551964 ZBTB47Q9UFB7 747 aaPredicted RBP26.71■■□□□ 1.87
APAF1-210ENST00000551964 ARID3CA6NKF2 412 aa26.66■■□□□ 1.86
APAF1-210ENST00000551964 CANXP27824 592 aaKnown RBP26.63■■□□□ 1.85
APAF1-210ENST00000551964 ACIN1Q9UKV3 1341 aaKnown RBP26.61■■□□□ 1.85
APAF1-210ENST00000551964 ZNF777Q9ULD5 760 aaPredicted RBP26.57■■□□□ 1.84
APAF1-210ENST00000551964 NEFMP07197 916 aa26.54■■□□□ 1.84
APAF1-210ENST00000551964 SCRIBQ14160 1630 aa26.5■■□□□ 1.83
APAF1-210ENST00000551964 SLC24A1O60721 1099 aa26.43■■□□□ 1.82
APAF1-210ENST00000551964 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
APAF1-210ENST00000551964 DCAF1Q9Y4B6 1507 aa26.42■■□□□ 1.82
APAF1-210ENST00000551964 TONSLQ96HA7 1378 aa26.42■■□□□ 1.82
APAF1-210ENST00000551964 ANP32AP39687 249 aaKnown RBP26.39■■□□□ 1.81
APAF1-210ENST00000551964 BCL11AQ9H165 835 aa26.36■■□□□ 1.81
APAF1-210ENST00000551964 FKBP8Q14318 412 aa26.24■■□□□ 1.79
APAF1-210ENST00000551964 NPM2Q86SE8 214 aaKnown RBP26.2■■□□□ 1.79
APAF1-210ENST00000551964 HNRNPUQ00839 825 aaKnown RBP eCLIP26.2■■□□□ 1.78
APAF1-210ENST00000551964 DDX10Q13206 875 aaKnown RBP26.2■■□□□ 1.78
APAF1-210ENST00000551964 ESF1Q9H501 851 aaKnown RBP26.16■■□□□ 1.78
APAF1-210ENST00000551964 CHGAP10645 457 aaKnown RBP26.15■■□□□ 1.78
APAF1-210ENST00000551964 FAM9BQ8IZU0 186 aa26.13■■□□□ 1.77
APAF1-210ENST00000551964 CHIC2Q9UKJ5 165 aa26.1■■□□□ 1.77
APAF1-210ENST00000551964 STAG3Q9UJ98 1225 aa26.09■■□□□ 1.77
APAF1-210ENST00000551964 NPM1P06748 294 aaKnown RBP eCLIP26.03■■□□□ 1.76
APAF1-210ENST00000551964 TMC1Q8TDI8 760 aa26■■□□□ 1.75
APAF1-210ENST00000551964 UPF2Q9HAU5 1272 aaKnown RBP25.99■■□□□ 1.75
APAF1-210ENST00000551964 MTUS2Q5JR59 1369 aa25.99■■□□□ 1.75
APAF1-210ENST00000551964 CCDC180Q9P1Z9 1646 aa25.98■■□□□ 1.75
APAF1-210ENST00000551964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.98■■□□□ 1.752e-12■■■■■ 39
APAF1-210ENST00000551964 CLIP1P30622 1438 aa25.97■■□□□ 1.75
APAF1-210ENST00000551964 SALL2Q9Y467 1007 aaPredicted RBP25.96■■□□□ 1.75
APAF1-210ENST00000551964 TSPY4P0CV99 314 aa25.95■■□□□ 1.75
APAF1-210ENST00000551964 TSPY10P0CW01 314 aa25.95■■□□□ 1.75
APAF1-210ENST00000551964 HSP90AA1P07900 732 aaKnown RBP25.95■■□□□ 1.74
APAF1-210ENST00000551964 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.91■■□□□ 1.74
APAF1-210ENST00000551964 CCDC136Q96JN2 1154 aa25.9■■□□□ 1.74
APAF1-210ENST00000551964 ANP32BQ92688 251 aaKnown RBP25.9■■□□□ 1.74
APAF1-210ENST00000551964 MRS2Q9HD23 443 aa25.9■■□□□ 1.74
APAF1-210ENST00000551964 WDR43Q15061 677 aaKnown RBP eCLIP25.89■■□□□ 1.73
APAF1-210ENST00000551964 KDM2AQ9Y2K7 1162 aa25.87■■□□□ 1.73
APAF1-210ENST00000551964 MIER1Q8N108 512 aa25.81■■□□□ 1.72
APAF1-210ENST00000551964 EEA1Q15075 1411 aa25.81■■□□□ 1.72
APAF1-210ENST00000551964 CHMP7Q8WUX9 453 aaPredicted RBP25.8■■□□□ 1.72
APAF1-210ENST00000551964 GOLGA3Q08378 1498 aa25.78■■□□□ 1.72
APAF1-210ENST00000551964 EIF4G2P78344 907 aaKnown RBP eCLIP25.78■■□□□ 1.72
APAF1-210ENST00000551964 PLPPR3Q6T4P5 718 aa25.76■■□□□ 1.71
APAF1-210ENST00000551964 CEP162Q5TB80 1403 aa25.73■■□□□ 1.71
APAF1-210ENST00000551964 RSF1Q96T23 1441 aaPredicted RBP25.73■■□□□ 1.71
APAF1-210ENST00000551964 RRP7BPQ9NSQ0 103 aa25.72■■□□□ 1.71
APAF1-210ENST00000551964 HIRIP3Q9BW71 556 aaPredicted RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms