RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 DCAF8L2P0C7V8 631 aa34.29■■■■□ 3.08
HCG18-235ENST00000426882 NISCHQ9Y2I1 1504 aa34.15■■■■□ 3.06
HCG18-235ENST00000426882 SUPT5HO00267 1087 aaKnown RBP33.05■■■□□ 2.88
HCG18-235ENST00000426882 SHROOM4Q9ULL8 1493 aa32.63■■■□□ 2.81
HCG18-235ENST00000426882 EHMT2Q96KQ7 1210 aa31.64■■■□□ 2.66
HCG18-235ENST00000426882 FAM9AQ8IZU1 332 aaPredicted RBP31.07■■■□□ 2.56
HCG18-235ENST00000426882 PCGF6Q9BYE7 350 aa30.98■■■□□ 2.55
HCG18-235ENST00000426882 APLP2Q06481 763 aa30.8■■■□□ 2.52
HCG18-235ENST00000426882 TRIM41Q8WV44 630 aa30.6■■■□□ 2.49
HCG18-235ENST00000426882 TTBK1Q5TCY1 1321 aaPredicted RBP30.6■■■□□ 2.49
HCG18-235ENST00000426882 PELP1Q8IZL8 1130 aaKnown RBP30.33■■■□□ 2.45
HCG18-235ENST00000426882 ZEB1P37275 1124 aaPredicted RBP30.25■■■□□ 2.43
HCG18-235ENST00000426882 RANGAP1P46060 587 aaPredicted RBP30.19■■■□□ 2.42
HCG18-235ENST00000426882 CCER1Q8TC90 406 aaPredicted RBP30.14■■■□□ 2.41
HCG18-235ENST00000426882 UBTFP17480 764 aaKnown RBP30.04■■■□□ 2.4
HCG18-235ENST00000426882 CENPBP07199 599 aaPredicted RBP29.89■■■□□ 2.37
HCG18-235ENST00000426882 CHIC1Q5VXU3 224 aa29.85■■■□□ 2.37
HCG18-235ENST00000426882 PPARGC1BQ86YN6 1023 aaKnown RBP29.78■■■□□ 2.36
HCG18-235ENST00000426882 TRIM26Q12899 539 aaPredicted RBP29.76■■■□□ 2.35
HCG18-235ENST00000426882 ATP1B4Q9UN42 357 aaPredicted RBP29.73■■■□□ 2.35
HCG18-235ENST00000426882 LOC105371045A0A1W2PR82 267 aa29.7■■■□□ 2.34
HCG18-235ENST00000426882 HRCP23327 699 aa29.64■■■□□ 2.34
HCG18-235ENST00000426882 YTHDC1Q96MU7 727 aaKnown RBP29.37■■■□□ 2.29
HCG18-235ENST00000426882 HNRNPUL2Q1KMD3 747 aaKnown RBP29.03■■■□□ 2.24
HCG18-235ENST00000426882 NEFLP07196 543 aa29.03■■■□□ 2.24
HCG18-235ENST00000426882 ITGAEP38570 1179 aa29.03■■■□□ 2.24
HCG18-235ENST00000426882 ERICH6Q7L0X2 663 aa29.03■■■□□ 2.24
HCG18-235ENST00000426882 ABCC9O60706 1549 aa28.89■■■□□ 2.22
HCG18-235ENST00000426882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.87■■■□□ 2.21
HCG18-235ENST00000426882 PABPN1Q86U42 306 aaKnown RBP eCLIP28.71■■■□□ 2.19
HCG18-235ENST00000426882 DIEXFQ68CQ4 756 aaKnown RBP28.59■■■□□ 2.17
HCG18-235ENST00000426882 POLR3GLQ9BT43 218 aa28.46■■■□□ 2.15
HCG18-235ENST00000426882 MYT1Q01538 1121 aa28.43■■■□□ 2.14
HCG18-235ENST00000426882 ZCCHC6Q5VYS8 1495 aaKnown RBP28.37■■■□□ 2.13
HCG18-235ENST00000426882 FAM50AQ14320 339 aaKnown RBP28.33■■■□□ 2.13
HCG18-235ENST00000426882 CNGB1Q14028 1251 aaPredicted RBP28.26■■■□□ 2.11
HCG18-235ENST00000426882 MYT1LQ9UL68 1186 aa28.25■■■□□ 2.11
HCG18-235ENST00000426882 CSRNP3Q8WYN3 585 aa28.19■■■□□ 2.1
HCG18-235ENST00000426882 NEUROD1Q13562 356 aa28.11■■■□□ 2.09
HCG18-235ENST00000426882 SCRIBQ14160 1630 aa28.04■■■□□ 2.08
HCG18-235ENST00000426882 TRIM52Q96A61 297 aa28.04■■■□□ 2.08
HCG18-235ENST00000426882 ZNF316A6NFI3 1004 aaPredicted RBP28.01■■■□□ 2.08
HCG18-235ENST00000426882 GTF3C3Q9Y5Q9 886 aa27.99■■■□□ 2.07
HCG18-235ENST00000426882 DCAF1Q9Y4B6 1507 aa27.94■■■□□ 2.06
HCG18-235ENST00000426882 DAXXQ9UER7 740 aaPredicted RBP27.88■■■□□ 2.05
HCG18-235ENST00000426882 CCDC180Q9P1Z9 1646 aa27.85■■■□□ 2.05
HCG18-235ENST00000426882 P3H3Q8IVL6 736 aa27.83■■■□□ 2.04
HCG18-235ENST00000426882 ANP32CO43423 234 aa27.78■■■□□ 2.04
HCG18-235ENST00000426882 BCANQ96GW7 911 aa27.73■■■□□ 2.03
HCG18-235ENST00000426882 ACIN1Q9UKV3 1341 aaKnown RBP27.72■■■□□ 2.03
HCG18-235ENST00000426882 SLC4A1APQ9BWU0 796 aaKnown RBP27.68■■■□□ 2.02
HCG18-235ENST00000426882 ZNF326Q5BKZ1 582 aaKnown RBP27.68■■■□□ 2.02
HCG18-235ENST00000426882 FBLN2P98095 1184 aa27.63■■■□□ 2.01
HCG18-235ENST00000426882 MYO15BQ96JP2 1530 aa27.61■■■□□ 2.01
HCG18-235ENST00000426882 ARID3CA6NKF2 412 aa27.58■■■□□ 2.01
HCG18-235ENST00000426882 RSF1Q96T23 1441 aaPredicted RBP27.47■■□□□ 1.99
HCG18-235ENST00000426882 CLSPNQ9HAW4 1339 aa27.46■■□□□ 1.99
HCG18-235ENST00000426882 RTL5Q5HYW3 569 aaPredicted RBP27.41■■□□□ 1.98
HCG18-235ENST00000426882 CDK11AQ9UQ88 783 aaPredicted RBP27.36■■□□□ 1.97
HCG18-235ENST00000426882 ZNF777Q9ULD5 760 aaPredicted RBP27.33■■□□□ 1.97
HCG18-235ENST00000426882 TONSLQ96HA7 1378 aa27.28■■□□□ 1.96
HCG18-235ENST00000426882 CLIP1P30622 1438 aa27.25■■□□□ 1.95
HCG18-235ENST00000426882 DDX10Q13206 875 aaKnown RBP27.21■■□□□ 1.95
HCG18-235ENST00000426882 CEP162Q5TB80 1403 aa27.14■■□□□ 1.94
HCG18-235ENST00000426882 RB1CC1Q8TDY2 1594 aa27.14■■□□□ 1.93
HCG18-235ENST00000426882 EEA1Q15075 1411 aa27.13■■□□□ 1.93
HCG18-235ENST00000426882 FKBP8Q14318 412 aa27.09■■□□□ 1.93
HCG18-235ENST00000426882 CHIC2Q9UKJ5 165 aa27.08■■□□□ 1.93
HCG18-235ENST00000426882 GOLGA3Q08378 1498 aa27.07■■□□□ 1.92
HCG18-235ENST00000426882 MIER1Q8N108 512 aa27.05■■□□□ 1.92
HCG18-235ENST00000426882 HNRNPUQ00839 825 aaKnown RBP eCLIP27.04■■□□□ 1.92
HCG18-235ENST00000426882 NACADO15069 1562 aa27.02■■□□□ 1.92
HCG18-235ENST00000426882 WRNQ14191 1432 aaPredicted RBP eCLIP27.02■■□□□ 1.92
HCG18-235ENST00000426882 SCAF1Q9H7N4 1312 aaKnown RBP26.98■■□□□ 1.91
HCG18-235ENST00000426882 MTUS2Q5JR59 1369 aa26.98■■□□□ 1.91
HCG18-235ENST00000426882 CANXP27824 592 aaKnown RBP26.95■■□□□ 1.91
HCG18-235ENST00000426882 TNIKQ9UKE5 1360 aa26.95■■□□□ 1.9
HCG18-235ENST00000426882 FAM9BQ8IZU0 186 aa26.94■■□□□ 1.9
HCG18-235ENST00000426882 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
HCG18-235ENST00000426882 HIRIP3Q9BW71 556 aaPredicted RBP26.86■■□□□ 1.89
HCG18-235ENST00000426882 ANP32AP39687 249 aaKnown RBP26.84■■□□□ 1.89
HCG18-235ENST00000426882 BAZ1BQ9UIG0 1483 aaKnown RBP26.82■■□□□ 1.88
HCG18-235ENST00000426882 ZBTB47Q9UFB7 747 aaPredicted RBP26.81■■□□□ 1.88
HCG18-235ENST00000426882 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
HCG18-235ENST00000426882 BAZ1AQ9NRL2 1556 aaPredicted RBP26.78■■□□□ 1.88
HCG18-235ENST00000426882 NEFMP07197 916 aa26.77■■□□□ 1.88
HCG18-235ENST00000426882 RRP7BPQ9NSQ0 103 aa26.75■■□□□ 1.87
HCG18-235ENST00000426882 TSPY4P0CV99 314 aa26.74■■□□□ 1.87
HCG18-235ENST00000426882 TSPY10P0CW01 314 aa26.74■■□□□ 1.87
HCG18-235ENST00000426882 NPM2Q86SE8 214 aaKnown RBP26.74■■□□□ 1.87
HCG18-235ENST00000426882 KIF27Q86VH2 1401 aa26.74■■□□□ 1.87
HCG18-235ENST00000426882 MRS2Q9HD23 443 aa26.73■■□□□ 1.87
HCG18-235ENST00000426882 TMC1Q8TDI8 760 aa26.72■■□□□ 1.87
HCG18-235ENST00000426882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.72■■□□□ 1.872e-6■■□□□ 11.6
HCG18-235ENST00000426882 SALL2Q9Y467 1007 aaPredicted RBP26.72■■□□□ 1.87
HCG18-235ENST00000426882 CHGAP10645 457 aaKnown RBP26.71■■□□□ 1.87
HCG18-235ENST00000426882 BCL11AQ9H165 835 aa26.71■■□□□ 1.87
HCG18-235ENST00000426882 KDM2AQ9Y2K7 1162 aa26.68■■□□□ 1.86
HCG18-235ENST00000426882 EIF4G2P78344 907 aaKnown RBP eCLIP26.67■■□□□ 1.86
HCG18-235ENST00000426882 CHMP7Q8WUX9 453 aaPredicted RBP26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms