RNA–Protein interactions for RNA: ENST00000578648.5

MSL1-204, Transcript of male specific lethal 1 homolog, humanhuman

TSL 5 BASIC

Gene MSL1, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-204ENST00000578648 NISCHQ9Y2I1 1504 aa43.6■■■■■ 4.57
MSL1-204ENST00000578648 CCDC180Q9P1Z9 1646 aa37.4■■■■□ 3.58
MSL1-204ENST00000578648 SHROOM4Q9ULL8 1493 aa37.29■■■■□ 3.56
MSL1-204ENST00000578648 ZCCHC6Q5VYS8 1495 aaKnown RBP36.91■■■■□ 3.5
MSL1-204ENST00000578648 SUPT5HO00267 1087 aaKnown RBP36.65■■■■□ 3.46
MSL1-204ENST00000578648 DCAF8L2P0C7V8 631 aa36.06■■■■□ 3.36
MSL1-204ENST00000578648 DCAF1Q9Y4B6 1507 aa35.84■■■■□ 3.33
MSL1-204ENST00000578648 CHIC1Q5VXU3 224 aa35.77■■■■□ 3.32
MSL1-204ENST00000578648 MYO15BQ96JP2 1530 aa35.7■■■■□ 3.31
MSL1-204ENST00000578648 HRCP23327 699 aa34.94■■■■□ 3.18
MSL1-204ENST00000578648 ABCC9O60706 1549 aa34.85■■■■□ 3.17
MSL1-204ENST00000578648 PCGF6Q9BYE7 350 aa34.8■■■■□ 3.16
MSL1-204ENST00000578648 LOC105371045A0A1W2PR82 267 aa34.73■■■■□ 3.15
MSL1-204ENST00000578648 SCRIBQ14160 1630 aa34.69■■■■□ 3.14
MSL1-204ENST00000578648 NACADO15069 1562 aa34.65■■■■□ 3.14
MSL1-204ENST00000578648 RSF1Q96T23 1441 aaPredicted RBP34.59■■■■□ 3.13
MSL1-204ENST00000578648 RB1CC1Q8TDY2 1594 aa34.24■■■■□ 3.07
MSL1-204ENST00000578648 PPARGC1BQ86YN6 1023 aaKnown RBP34.22■■■■□ 3.07
MSL1-204ENST00000578648 TRIM41Q8WV44 630 aa34.11■■■■□ 3.05
MSL1-204ENST00000578648 TRIM26Q12899 539 aaPredicted RBP34.1■■■■□ 3.05
MSL1-204ENST00000578648 CECR2Q9BXF3 1484 aa34.03■■■■□ 3.04
MSL1-204ENST00000578648 MROH2BQ7Z745 1585 aa33.93■■■■□ 3.02
MSL1-204ENST00000578648 FAM9AQ8IZU1 332 aaPredicted RBP33.86■■■■□ 3.01
MSL1-204ENST00000578648 WIZO95785 1651 aa33.76■■■□□ 2.99
MSL1-204ENST00000578648 UNC13AQ9UPW8 1703 aa33.62■■■□□ 2.97
MSL1-204ENST00000578648 EHMT2Q96KQ7 1210 aa33.56■■■□□ 2.96
MSL1-204ENST00000578648 BAZ1AQ9NRL2 1556 aaPredicted RBP33.52■■■□□ 2.96
MSL1-204ENST00000578648 EIF4G1Q04637 1599 aaKnown RBP33.39■■■□□ 2.94
MSL1-204ENST00000578648 ZEB1P37275 1124 aaPredicted RBP33.39■■■□□ 2.93
MSL1-204ENST00000578648 SMARCA4P51532 1647 aa33.23■■■□□ 2.91
MSL1-204ENST00000578648 TOP2AP11388 1531 aaKnown RBP33.19■■■□□ 2.9
MSL1-204ENST00000578648 BICRAQ9NZM4 1560 aa33.18■■■□□ 2.9
MSL1-204ENST00000578648 CCDC88BA6NC98 1476 aa33.1■■■□□ 2.89
MSL1-204ENST00000578648 ABCC8Q09428 1581 aa33.06■■■□□ 2.88
MSL1-204ENST00000578648 SMARCA2P51531 1590 aa33.04■■■□□ 2.88
MSL1-204ENST00000578648 PABPN1Q86U42 306 aaKnown RBP eCLIP33.03■■■□□ 2.88
MSL1-204ENST00000578648 SOGA1O94964 1423 aa32.79■■■□□ 2.84
MSL1-204ENST00000578648 PEG3Q9GZU2 1588 aa32.73■■■□□ 2.83
MSL1-204ENST00000578648 WRNQ14191 1432 aaPredicted RBP eCLIP32.72■■■□□ 2.83
MSL1-204ENST00000578648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.72■■■□□ 2.83
MSL1-204ENST00000578648 CEP162Q5TB80 1403 aa32.69■■■□□ 2.82
MSL1-204ENST00000578648 RUSC2Q8N2Y8 1516 aa32.65■■■□□ 2.82
MSL1-204ENST00000578648 TNIKQ9UKE5 1360 aa32.65■■■□□ 2.82
MSL1-204ENST00000578648 CSRNP3Q8WYN3 585 aa32.61■■■□□ 2.81
MSL1-204ENST00000578648 CCER1Q8TC90 406 aaPredicted RBP32.6■■■□□ 2.81
MSL1-204ENST00000578648 EEA1Q15075 1411 aa32.59■■■□□ 2.81
MSL1-204ENST00000578648 TTBK1Q5TCY1 1321 aaPredicted RBP32.52■■■□□ 2.8
MSL1-204ENST00000578648 ATAD2BQ9ULI0 1458 aa32.47■■■□□ 2.79
MSL1-204ENST00000578648 UBTFP17480 764 aaKnown RBP32.46■■■□□ 2.79
MSL1-204ENST00000578648 GOLGA3Q08378 1498 aa32.4■■■□□ 2.78
MSL1-204ENST00000578648 BAZ1BQ9UIG0 1483 aaKnown RBP32.35■■■□□ 2.77
MSL1-204ENST00000578648 SYNJ1O43426 1573 aa32.32■■■□□ 2.76
MSL1-204ENST00000578648 SCAF1Q9H7N4 1312 aaKnown RBP32.31■■■□□ 2.76
MSL1-204ENST00000578648 CEP164Q9UPV0 1460 aa32.19■■■□□ 2.74
MSL1-204ENST00000578648 KIF21BO75037 1637 aa32.18■■■□□ 2.74
MSL1-204ENST00000578648 DIEXFQ68CQ4 756 aaKnown RBP32.07■■■□□ 2.73
MSL1-204ENST00000578648 CLIP1P30622 1438 aa32.04■■■□□ 2.72
MSL1-204ENST00000578648 HMGXB3Q12766 1538 aa32.01■■■□□ 2.71
MSL1-204ENST00000578648 NCAPD3P42695 1498 aa32.01■■■□□ 2.71
MSL1-204ENST00000578648 RAPGEF2Q9Y4G8 1499 aa31.98■■■□□ 2.71
MSL1-204ENST00000578648 ACIN1Q9UKV3 1341 aaKnown RBP31.94■■■□□ 2.7
MSL1-204ENST00000578648 VPS8Q8N3P4 1428 aa31.93■■■□□ 2.7
MSL1-204ENST00000578648 NEUROD1Q13562 356 aa31.9■■■□□ 2.7
MSL1-204ENST00000578648 TOP2BQ02880 1626 aa31.89■■■□□ 2.7
MSL1-204ENST00000578648 HNRNPUL2Q1KMD3 747 aaKnown RBP31.87■■■□□ 2.69
MSL1-204ENST00000578648 ZNF316A6NFI3 1004 aaPredicted RBP31.82■■■□□ 2.68
MSL1-204ENST00000578648 BIVM-ERCC5R4GMW8 1640 aa31.77■■■□□ 2.68
MSL1-204ENST00000578648 RANGAP1P46060 587 aaPredicted RBP31.77■■■□□ 2.68
MSL1-204ENST00000578648 APLP2Q06481 763 aa31.73■■■□□ 2.67
MSL1-204ENST00000578648 PELP1Q8IZL8 1130 aaKnown RBP31.71■■■□□ 2.67
MSL1-204ENST00000578648 CENPBP07199 599 aaPredicted RBP31.66■■■□□ 2.66
MSL1-204ENST00000578648 PRXQ9BXM0 1461 aa31.64■■■□□ 2.66
MSL1-204ENST00000578648 ERICH3Q5RHP9 1530 aa31.62■■■□□ 2.65
MSL1-204ENST00000578648 CFTRP13569 1480 aa31.57■■■□□ 2.64
MSL1-204ENST00000578648 CUX1P39880 1505 aa31.56■■■□□ 2.64
MSL1-204ENST00000578648 GTF3C3Q9Y5Q9 886 aa31.56■■■□□ 2.64
MSL1-204ENST00000578648 ARAP1Q96P48 1450 aa31.55■■■□□ 2.64
MSL1-204ENST00000578648 PRDM2Q13029 1718 aa31.43■■■□□ 2.62
MSL1-204ENST00000578648 CC2D2AQ9P2K1 1620 aa31.43■■■□□ 2.62
MSL1-204ENST00000578648 KANK4Q5T7N3 995 aaPredicted RBP31.42■■■□□ 2.62
MSL1-204ENST00000578648 KIF27Q86VH2 1401 aa31.42■■■□□ 2.62
MSL1-204ENST00000578648 MIER1Q8N108 512 aa31.4■■■□□ 2.62
MSL1-204ENST00000578648 DHX57Q6P158 1386 aaKnown RBP31.31■■■□□ 2.6
MSL1-204ENST00000578648 YTHDC1Q96MU7 727 aaKnown RBP31.3■■■□□ 2.6
MSL1-204ENST00000578648 CADPSQ9ULU8 1353 aa31.29■■■□□ 2.6
MSL1-204ENST00000578648 CLSPNQ9HAW4 1339 aa31.25■■■□□ 2.59
MSL1-204ENST00000578648 ARHGAP35Q9NRY4 1499 aa31.24■■■□□ 2.59
MSL1-204ENST00000578648 RRBP1Q9P2E9 1410 aaKnown RBP31.24■■■□□ 2.59
MSL1-204ENST00000578648 IGF1RP08069 1367 aa31.12■■■□□ 2.57
MSL1-204ENST00000578648 CUX2O14529 1486 aa31.1■■■□□ 2.57
MSL1-204ENST00000578648 CCNB3Q8WWL7 1395 aa31.07■■■□□ 2.56
MSL1-204ENST00000578648 CARMIL1Q5VZK9 1371 aa30.96■■■□□ 2.55
MSL1-204ENST00000578648 FANCD2Q9BXW9 1451 aa30.96■■■□□ 2.55
MSL1-204ENST00000578648 FGD5Q6ZNL6 1462 aa30.95■■■□□ 2.55
MSL1-204ENST00000578648 ITGAEP38570 1179 aa30.94■■■□□ 2.54
MSL1-204ENST00000578648 TIAM1Q13009 1591 aa30.91■■■□□ 2.54
MSL1-204ENST00000578648 MAP3K1Q13233 1512 aa30.89■■■□□ 2.54
MSL1-204ENST00000578648 RAB3GAP2Q9H2M9 1393 aa30.83■■■□□ 2.53
MSL1-204ENST00000578648 NESP48681 1621 aa30.82■■■□□ 2.52
MSL1-204ENST00000578648 DNMBPQ6XZF7 1577 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms