Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM9Q9NQV7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM9Q9NQV7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM9Q9NQV7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.74■■□□□ 1.07
PRDM9Q9NQV7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM9Q9NQV7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM9Q9NQV7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM9Q9NQV7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.74■■□□□ 1.07
PRDM9Q9NQV7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM9Q9NQV7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.74■■□□□ 1.07
PRDM9Q9NQV7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM9Q9NQV7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM9Q9NQV7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.73■■□□□ 1.07
PRDM9Q9NQV7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.73■■□□□ 1.07
PRDM9Q9NQV7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PRDM9Q9NQV7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM9Q9NQV7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM9Q9NQV7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM9Q9NQV7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PRDM9Q9NQV7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM9Q9NQV7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM9Q9NQV7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.72■■□□□ 1.07
PRDM9Q9NQV7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM9Q9NQV7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
PRDM9Q9NQV7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.72■■□□□ 1.07
PRDM9Q9NQV7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM9Q9NQV7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.72■■□□□ 1.07
PRDM9Q9NQV7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM9Q9NQV7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM9Q9NQV7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM9Q9NQV7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.72■■□□□ 1.07
PRDM9Q9NQV7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRDM9Q9NQV7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRDM9Q9NQV7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRDM9Q9NQV7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PRDM9Q9NQV7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
PRDM9Q9NQV7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRDM9Q9NQV7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.71■■□□□ 1.07
PRDM9Q9NQV7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PRDM9Q9NQV7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PRDM9Q9NQV7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.71■■□□□ 1.07
PRDM9Q9NQV7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRDM9Q9NQV7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PRDM9Q9NQV7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PRDM9Q9NQV7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRDM9Q9NQV7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRDM9Q9NQV7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PRDM9Q9NQV7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRDM9Q9NQV7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PRDM9Q9NQV7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.7■■□□□ 1.06
PRDM9Q9NQV7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
PRDM9Q9NQV7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRDM9Q9NQV7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.7■■□□□ 1.06
PRDM9Q9NQV7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PRDM9Q9NQV7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.69■■□□□ 1.06
PRDM9Q9NQV7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRDM9Q9NQV7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRDM9Q9NQV7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.69■■□□□ 1.06
PRDM9Q9NQV7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRDM9Q9NQV7 TSPY9P-201ENST00000440215 945 ntBASIC21.69■■□□□ 1.06
PRDM9Q9NQV7 TSPY11P-201ENST00000442607 1045 ntBASIC21.69■■□□□ 1.06
PRDM9Q9NQV7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.69■■□□□ 1.06
PRDM9Q9NQV7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.69■■□□□ 1.06
PRDM9Q9NQV7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.69■■□□□ 1.06
PRDM9Q9NQV7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.69■■□□□ 1.06
PRDM9Q9NQV7 AC131274.2-201ENST00000580697 1507 ntBASIC21.69■■□□□ 1.06
PRDM9Q9NQV7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRDM9Q9NQV7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRDM9Q9NQV7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PRDM9Q9NQV7 UNC93B8-201ENST00000511903 705 ntBASIC21.68■■□□□ 1.06
PRDM9Q9NQV7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.68■■□□□ 1.06
PRDM9Q9NQV7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
PRDM9Q9NQV7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 SNX5-217ENST00000606557 1087 ntBASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.67■■□□□ 1.06
PRDM9Q9NQV7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRDM9Q9NQV7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.66■■□□□ 1.06
PRDM9Q9NQV7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRDM9Q9NQV7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRDM9Q9NQV7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRDM9Q9NQV7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms