Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TMEFF1Q8IYR6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMEFF1Q8IYR6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TMEFF1Q8IYR6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
TMEFF1Q8IYR6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TMEFF1Q8IYR6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
TMEFF1Q8IYR6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TMEFF1Q8IYR6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TMEFF1Q8IYR6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TMEFF1Q8IYR6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.1■■□□□ 1.29
TMEFF1Q8IYR6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMEFF1Q8IYR6 AC005703.6-201ENST00000623265 1329 ntBASIC23.09■■□□□ 1.29
TMEFF1Q8IYR6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.09■■□□□ 1.29
TMEFF1Q8IYR6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMEFF1Q8IYR6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TMEFF1Q8IYR6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.09■■□□□ 1.29
TMEFF1Q8IYR6 DUX4L19-201ENST00000557448 1267 ntBASIC23.09■■□□□ 1.29
TMEFF1Q8IYR6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.09■■□□□ 1.29
TMEFF1Q8IYR6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TMEFF1Q8IYR6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMEFF1Q8IYR6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMEFF1Q8IYR6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMEFF1Q8IYR6 MIR939-201ENST00000401314 82 ntBASIC23.08■■□□□ 1.29
TMEFF1Q8IYR6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.08■■□□□ 1.29
TMEFF1Q8IYR6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TMEFF1Q8IYR6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMEFF1Q8IYR6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
TMEFF1Q8IYR6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TMEFF1Q8IYR6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TMEFF1Q8IYR6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
TMEFF1Q8IYR6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TMEFF1Q8IYR6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
TMEFF1Q8IYR6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TMEFF1Q8IYR6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TMEFF1Q8IYR6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.07■■□□□ 1.28
TMEFF1Q8IYR6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.07■■□□□ 1.28
TMEFF1Q8IYR6 AP001330.3-201ENST00000520123 633 ntBASIC23.07■■□□□ 1.28
TMEFF1Q8IYR6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.07■■□□□ 1.28
TMEFF1Q8IYR6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.07■■□□□ 1.28
TMEFF1Q8IYR6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TMEFF1Q8IYR6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEFF1Q8IYR6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TMEFF1Q8IYR6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEFF1Q8IYR6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEFF1Q8IYR6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TMEFF1Q8IYR6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.06■■□□□ 1.28
TMEFF1Q8IYR6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
TMEFF1Q8IYR6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.06■■□□□ 1.28
TMEFF1Q8IYR6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TMEFF1Q8IYR6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEFF1Q8IYR6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEFF1Q8IYR6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
TMEFF1Q8IYR6 SYT6-210ENST00000641643 1587 ntBASIC23.06■■□□□ 1.28
TMEFF1Q8IYR6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TMEFF1Q8IYR6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TMEFF1Q8IYR6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TMEFF1Q8IYR6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.05■■□□□ 1.28
TMEFF1Q8IYR6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
TMEFF1Q8IYR6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TMEFF1Q8IYR6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TMEFF1Q8IYR6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TMEFF1Q8IYR6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TMEFF1Q8IYR6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TMEFF1Q8IYR6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
TMEFF1Q8IYR6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TMEFF1Q8IYR6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.04■■□□□ 1.28
TMEFF1Q8IYR6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.04■■□□□ 1.28
TMEFF1Q8IYR6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TMEFF1Q8IYR6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.04■■□□□ 1.28
TMEFF1Q8IYR6 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.04■■□□□ 1.28
TMEFF1Q8IYR6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TMEFF1Q8IYR6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TMEFF1Q8IYR6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TMEFF1Q8IYR6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
TMEFF1Q8IYR6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.03■■□□□ 1.28
TMEFF1Q8IYR6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TMEFF1Q8IYR6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.03■■□□□ 1.28
TMEFF1Q8IYR6 MIR4767-201ENST00000582827 78 ntBASIC23.03■■□□□ 1.28
TMEFF1Q8IYR6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TMEFF1Q8IYR6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
TMEFF1Q8IYR6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TMEFF1Q8IYR6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TMEFF1Q8IYR6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.02■■□□□ 1.28
TMEFF1Q8IYR6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.02■■□□□ 1.28
TMEFF1Q8IYR6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.02■■□□□ 1.28
TMEFF1Q8IYR6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
TMEFF1Q8IYR6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
TMEFF1Q8IYR6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TMEFF1Q8IYR6 AC091305.1-201ENST00000479476 895 ntBASIC23.02■■□□□ 1.28
TMEFF1Q8IYR6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.02■■□□□ 1.28
TMEFF1Q8IYR6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TMEFF1Q8IYR6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
TMEFF1Q8IYR6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TMEFF1Q8IYR6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.01■■□□□ 1.27
TMEFF1Q8IYR6 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.01■■□□□ 1.27
TMEFF1Q8IYR6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TMEFF1Q8IYR6 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.01■■□□□ 1.27
TMEFF1Q8IYR6 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.01■■□□□ 1.27
TMEFF1Q8IYR6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23■■□□□ 1.27
TMEFF1Q8IYR6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms