RNA–Protein interactions for RNA: ENST00000264703.3

FNDC4-201, Transcript of fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC4, Length 1,657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC4-201ENST00000264703 NISCHQ9Y2I1 1504 aa54.69■■■■■ 6.35
FNDC4-201ENST00000264703 CCDC180Q9P1Z9 1646 aa48.42■■■■■ 5.34
FNDC4-201ENST00000264703 ABCC9O60706 1549 aa47.2■■■■■ 5.15
FNDC4-201ENST00000264703 DCAF8L2P0C7V8 631 aa45.69■■■■■ 4.9
FNDC4-201ENST00000264703 ZCCHC6Q5VYS8 1495 aaKnown RBP45.62■■■■■ 4.89
FNDC4-201ENST00000264703 NACADO15069 1562 aa45.51■■■■■ 4.88
FNDC4-201ENST00000264703 RB1CC1Q8TDY2 1594 aa45.49■■■■■ 4.87
FNDC4-201ENST00000264703 MYO15BQ96JP2 1530 aa45.33■■■■■ 4.85
FNDC4-201ENST00000264703 DCAF1Q9Y4B6 1507 aa45.24■■■■■ 4.83
FNDC4-201ENST00000264703 UNC13AQ9UPW8 1703 aa44.37■■■■■ 4.69
FNDC4-201ENST00000264703 SCRIBQ14160 1630 aa44.27■■■■■ 4.68
FNDC4-201ENST00000264703 PABPN1Q86U42 306 aaKnown RBP eCLIP44.19■■■■■ 4.67
FNDC4-201ENST00000264703 BICRAQ9NZM4 1560 aa44.08■■■■■ 4.65
FNDC4-201ENST00000264703 SHROOM4Q9ULL8 1493 aa43.65■■■■■ 4.58
FNDC4-201ENST00000264703 DNAJC5BQ9UF47 199 aa43.07■■■■■ 4.49
FNDC4-201ENST00000264703 EIF4G1Q04637 1599 aaKnown RBP42.92■■■■■ 4.46
FNDC4-201ENST00000264703 CC2D2AQ9P2K1 1620 aa42.67■■■■■ 4.42
FNDC4-201ENST00000264703 CECR2Q9BXF3 1484 aa42.6■■■■■ 4.41
FNDC4-201ENST00000264703 BAZ1AQ9NRL2 1556 aaPredicted RBP42.37■■■■■ 4.37
FNDC4-201ENST00000264703 SMARCA4P51532 1647 aa42.35■■■■■ 4.37
FNDC4-201ENST00000264703 MROH2BQ7Z745 1585 aa42.16■■■■■ 4.34
FNDC4-201ENST00000264703 ATAD2BQ9ULI0 1458 aa42.08■■■■■ 4.33
FNDC4-201ENST00000264703 SMARCA2P51531 1590 aa42.03■■■■■ 4.32
FNDC4-201ENST00000264703 NCAPD3P42695 1498 aa42.01■■■■■ 4.32
FNDC4-201ENST00000264703 PEG3Q9GZU2 1588 aa41.93■■■■■ 4.3
FNDC4-201ENST00000264703 HMGXB3Q12766 1538 aa41.81■■■■■ 4.28
FNDC4-201ENST00000264703 RSF1Q96T23 1441 aaPredicted RBP41.8■■■■■ 4.28
FNDC4-201ENST00000264703 BAZ1BQ9UIG0 1483 aaKnown RBP41.76■■■■■ 4.28
FNDC4-201ENST00000264703 WIZO95785 1651 aa41.69■■■■■ 4.27
FNDC4-201ENST00000264703 TOP2AP11388 1531 aaKnown RBP41.28■■■■■ 4.2
FNDC4-201ENST00000264703 SUPT5HO00267 1087 aaKnown RBP41.04■■■■■ 4.16
FNDC4-201ENST00000264703 NESP48681 1621 aa40.92■■■■■ 4.14
FNDC4-201ENST00000264703 LAMC3Q9Y6N6 1575 aa40.84■■■■■ 4.13
FNDC4-201ENST00000264703 CADPSQ9ULU8 1353 aa40.83■■■■■ 4.13
FNDC4-201ENST00000264703 CCDC88BA6NC98 1476 aa40.82■■■■■ 4.13
FNDC4-201ENST00000264703 ERCC6Q03468 1493 aa40.67■■■■■ 4.1
FNDC4-201ENST00000264703 CFTRP13569 1480 aa40.63■■■■■ 4.09
FNDC4-201ENST00000264703 PDS5BQ9NTI5 1447 aa40.59■■■■■ 4.09
FNDC4-201ENST00000264703 KIF21AQ7Z4S6 1674 aa40.38■■■■■ 4.05
FNDC4-201ENST00000264703 FANCD2Q9BXW9 1451 aa40.35■■■■■ 4.05
FNDC4-201ENST00000264703 CEP164Q9UPV0 1460 aa40.27■■■■■ 4.04
FNDC4-201ENST00000264703 PRDM2Q13029 1718 aa40.22■■■■■ 4.03
FNDC4-201ENST00000264703 THOC2Q8NI27 1593 aaKnown RBP40.19■■■■■ 4.02
FNDC4-201ENST00000264703 MRC2Q9UBG0 1479 aa40.13■■■■■ 4.01
FNDC4-201ENST00000264703 CUX2O14529 1486 aa40.09■■■■■ 4.01
FNDC4-201ENST00000264703 WDR62O43379 1518 aa39.98■■■■□ 3.99
FNDC4-201ENST00000264703 URB2Q14146 1524 aaKnown RBP39.91■■■■□ 3.98
FNDC4-201ENST00000264703 ABCC8Q09428 1581 aa39.73■■■■□ 3.95
FNDC4-201ENST00000264703 TOPBP1Q92547 1522 aa39.72■■■■□ 3.95
FNDC4-201ENST00000264703 DNMBPQ6XZF7 1577 aa39.68■■■■□ 3.94
FNDC4-201ENST00000264703 CUX1P39880 1505 aa39.53■■■■□ 3.92
FNDC4-201ENST00000264703 WRNQ14191 1432 aaPredicted RBP eCLIP39.42■■■■□ 3.9
FNDC4-201ENST00000264703 POLA1P09884 1462 aaPredicted RBP39.42■■■■□ 3.9
FNDC4-201ENST00000264703 IFT140Q96RY7 1462 aa39.41■■■■□ 3.9
FNDC4-201ENST00000264703 FGD5Q6ZNL6 1462 aa39.37■■■■□ 3.89
FNDC4-201ENST00000264703 SOGA1O94964 1423 aa39.28■■■■□ 3.88
FNDC4-201ENST00000264703 SYNJ1O43426 1573 aa39.26■■■■□ 3.88
FNDC4-201ENST00000264703 TOP2BQ02880 1626 aa39.26■■■■□ 3.87
FNDC4-201ENST00000264703 RAD54L2Q9Y4B4 1467 aa39.26■■■■□ 3.87
FNDC4-201ENST00000264703 TARBP1Q13395 1621 aaKnown RBP39.24■■■■□ 3.87
FNDC4-201ENST00000264703 BIVM-ERCC5R4GMW8 1640 aa39.22■■■■□ 3.87
FNDC4-201ENST00000264703 ZNF608Q9ULD9 1512 aaPredicted RBP39.22■■■■□ 3.87
FNDC4-201ENST00000264703 AQRO60306 1485 aaKnown RBP eCLIP39.04■■■■□ 3.841e-8■■■■■ 37.7
FNDC4-201ENST00000264703 TDRD9Q8NDG6 1382 aaKnown RBP39.04■■■■□ 3.84
FNDC4-201ENST00000264703 EIF4G3O43432 1585 aaKnown RBP39.04■■■■□ 3.84
FNDC4-201ENST00000264703 ABCA10Q8WWZ4 1543 aa38.99■■■■□ 3.83
FNDC4-201ENST00000264703 WDR97A6NE52 1622 aa38.95■■■■□ 3.83
FNDC4-201ENST00000264703 GAPVD1Q14C86 1478 aa38.82■■■■□ 3.81
FNDC4-201ENST00000264703 ABCA5Q8WWZ7 1642 aa38.78■■■■□ 3.8
FNDC4-201ENST00000264703 GRIN2BQ13224 1484 aa38.77■■■■□ 3.8
FNDC4-201ENST00000264703 TRIM41Q8WV44 630 aa38.74■■■■□ 3.79
FNDC4-201ENST00000264703 SNAPC4Q5SXM2 1469 aa38.68■■■■□ 3.78
FNDC4-201ENST00000264703 PBRM1Q86U86 1689 aa38.64■■■■□ 3.78
FNDC4-201ENST00000264703 MAGI1Q96QZ7 1491 aaPredicted RBP38.62■■■■□ 3.77
FNDC4-201ENST00000264703 FBLN2P98095 1184 aa38.58■■■■□ 3.77
FNDC4-201ENST00000264703 KIF27Q86VH2 1401 aa38.58■■■■□ 3.77
FNDC4-201ENST00000264703 DNAJC5Q9H3Z4 198 aa38.55■■■■□ 3.76
FNDC4-201ENST00000264703 OSCARQ8IYS5 282 aa38.55■■■■□ 3.76
FNDC4-201ENST00000264703 ERICH3Q5RHP9 1530 aa38.52■■■■□ 3.76
FNDC4-201ENST00000264703 CHMP7Q8WUX9 453 aaPredicted RBP38.49■■■■□ 3.75
FNDC4-201ENST00000264703 SYNJ2O15056 1496 aa38.48■■■■□ 3.75
FNDC4-201ENST00000264703 CHD1O14646 1710 aa38.44■■■■□ 3.74
FNDC4-201ENST00000264703 CHIC1Q5VXU3 224 aa38.44■■■■□ 3.74
FNDC4-201ENST00000264703 ADAMTS12P58397 1594 aa38.39■■■■□ 3.74
FNDC4-201ENST00000264703 FHAD1B1AJZ9 1412 aa38.39■■■■□ 3.74
FNDC4-201ENST00000264703 IGF1RP08069 1367 aa38.38■■■■□ 3.74
FNDC4-201ENST00000264703 RUSC2Q8N2Y8 1516 aa38.31■■■■□ 3.72
FNDC4-201ENST00000264703 GRIN2AQ12879 1464 aa38.27■■■■□ 3.72
FNDC4-201ENST00000264703 CUL7Q14999 1698 aa38.2■■■■□ 3.71
FNDC4-201ENST00000264703 CARMIL1Q5VZK9 1371 aa38.16■■■■□ 3.7
FNDC4-201ENST00000264703 NUP160Q12769 1436 aa38.08■■■■□ 3.69
FNDC4-201ENST00000264703 CLASP1Q7Z460 1538 aa38.07■■■■□ 3.68
FNDC4-201ENST00000264703 CEP170Q5SW79 1584 aa38.04■■■■□ 3.68
FNDC4-201ENST00000264703 EEA1Q15075 1411 aa38.02■■■■□ 3.68
FNDC4-201ENST00000264703 CSRNP3Q8WYN3 585 aa37.97■■■■□ 3.67
FNDC4-201ENST00000264703 RAPGEF2Q9Y4G8 1499 aa37.96■■■■□ 3.67
FNDC4-201ENST00000264703 FAM9AQ8IZU1 332 aaPredicted RBP37.94■■■■□ 3.66
FNDC4-201ENST00000264703 PRXQ9BXM0 1461 aa37.89■■■■□ 3.66
FNDC4-201ENST00000264703 ARHGEF11O15085 1522 aa37.88■■■■□ 3.65
FNDC4-201ENST00000264703 RIMBP3CA6NJZ7 1639 aa37.82■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms