RNA–Protein interactions for RNA: ENST00000488671.1

AC112229.4-201, humanhuman

TSL 2 BASIC

Gene AC112229.4, Length 1,528 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC112229.4-201ENST00000488671 NISCHQ9Y2I1 1504 aa54.62■■■■■ 6.33
AC112229.4-201ENST00000488671 CCDC180Q9P1Z9 1646 aa48.36■■■■■ 5.33
AC112229.4-201ENST00000488671 ABCC9O60706 1549 aa47.17■■■■■ 5.14
AC112229.4-201ENST00000488671 DCAF8L2P0C7V8 631 aa45.72■■■■■ 4.91
AC112229.4-201ENST00000488671 ZCCHC6Q5VYS8 1495 aaKnown RBP45.55■■■■■ 4.88
AC112229.4-201ENST00000488671 RB1CC1Q8TDY2 1594 aa45.39■■■■■ 4.86
AC112229.4-201ENST00000488671 NACADO15069 1562 aa45.38■■■■■ 4.86
AC112229.4-201ENST00000488671 MYO15BQ96JP2 1530 aa45.11■■■■■ 4.81
AC112229.4-201ENST00000488671 DCAF1Q9Y4B6 1507 aa45.09■■■■■ 4.81
AC112229.4-201ENST00000488671 UNC13AQ9UPW8 1703 aa44.49■■■■■ 4.71
AC112229.4-201ENST00000488671 SCRIBQ14160 1630 aa44.33■■■■■ 4.69
AC112229.4-201ENST00000488671 PABPN1Q86U42 306 aaKnown RBP eCLIP44.19■■■■■ 4.66
AC112229.4-201ENST00000488671 BICRAQ9NZM4 1560 aa44.05■■■■■ 4.64
AC112229.4-201ENST00000488671 SHROOM4Q9ULL8 1493 aa43.59■■■■■ 4.57
AC112229.4-201ENST00000488671 DNAJC5BQ9UF47 199 aa43.01■■■■■ 4.48
AC112229.4-201ENST00000488671 EIF4G1Q04637 1599 aaKnown RBP42.85■■■■■ 4.45
AC112229.4-201ENST00000488671 CC2D2AQ9P2K1 1620 aa42.63■■■■■ 4.42
AC112229.4-201ENST00000488671 CECR2Q9BXF3 1484 aa42.61■■■■■ 4.41
AC112229.4-201ENST00000488671 SMARCA4P51532 1647 aa42.34■■■■■ 4.37
AC112229.4-201ENST00000488671 BAZ1AQ9NRL2 1556 aaPredicted RBP42.29■■■■■ 4.36
AC112229.4-201ENST00000488671 MROH2BQ7Z745 1585 aa42.17■■■■■ 4.34
AC112229.4-201ENST00000488671 ATAD2BQ9ULI0 1458 aa42■■■■■ 4.31
AC112229.4-201ENST00000488671 SMARCA2P51531 1590 aa41.93■■■■■ 4.3
AC112229.4-201ENST00000488671 NCAPD3P42695 1498 aa41.86■■■■■ 4.29
AC112229.4-201ENST00000488671 PEG3Q9GZU2 1588 aa41.81■■■■■ 4.28
AC112229.4-201ENST00000488671 WIZO95785 1651 aa41.79■■■■■ 4.28
AC112229.4-201ENST00000488671 RSF1Q96T23 1441 aaPredicted RBP41.77■■■■■ 4.28
AC112229.4-201ENST00000488671 BAZ1BQ9UIG0 1483 aaKnown RBP41.7■■■■■ 4.27
AC112229.4-201ENST00000488671 HMGXB3Q12766 1538 aa41.7■■■■■ 4.27
AC112229.4-201ENST00000488671 TOP2AP11388 1531 aaKnown RBP41.25■■■■■ 4.19
AC112229.4-201ENST00000488671 SUPT5HO00267 1087 aaKnown RBP41.15■■■■■ 4.18
AC112229.4-201ENST00000488671 NESP48681 1621 aa40.93■■■■■ 4.14
AC112229.4-201ENST00000488671 CCDC88BA6NC98 1476 aa40.82■■■■■ 4.12
AC112229.4-201ENST00000488671 LAMC3Q9Y6N6 1575 aa40.73■■■■■ 4.11
AC112229.4-201ENST00000488671 CADPSQ9ULU8 1353 aa40.71■■■■■ 4.11
AC112229.4-201ENST00000488671 ERCC6Q03468 1493 aa40.59■■■■■ 4.09
AC112229.4-201ENST00000488671 CFTRP13569 1480 aa40.52■■■■■ 4.08
AC112229.4-201ENST00000488671 PDS5BQ9NTI5 1447 aa40.46■■■■■ 4.07
AC112229.4-201ENST00000488671 KIF21AQ7Z4S6 1674 aa40.45■■■■■ 4.07
AC112229.4-201ENST00000488671 PRDM2Q13029 1718 aa40.3■■■■■ 4.04
AC112229.4-201ENST00000488671 FANCD2Q9BXW9 1451 aa40.28■■■■■ 4.04
AC112229.4-201ENST00000488671 CEP164Q9UPV0 1460 aa40.19■■■■■ 4.02
AC112229.4-201ENST00000488671 THOC2Q8NI27 1593 aaKnown RBP40.15■■■■■ 4.02
AC112229.4-201ENST00000488671 MRC2Q9UBG0 1479 aa40.04■■■■■ 4
AC112229.4-201ENST00000488671 CUX2O14529 1486 aa39.91■■■■□ 3.98
AC112229.4-201ENST00000488671 WDR62O43379 1518 aa39.88■■■■□ 3.97
AC112229.4-201ENST00000488671 URB2Q14146 1524 aaKnown RBP39.88■■■■□ 3.97
AC112229.4-201ENST00000488671 TOPBP1Q92547 1522 aa39.68■■■■□ 3.94
AC112229.4-201ENST00000488671 DNMBPQ6XZF7 1577 aa39.64■■■■□ 3.94
AC112229.4-201ENST00000488671 ABCC8Q09428 1581 aa39.59■■■■□ 3.93
AC112229.4-201ENST00000488671 CUX1P39880 1505 aa39.54■■■■□ 3.92
AC112229.4-201ENST00000488671 WRNQ14191 1432 aaPredicted RBP eCLIP39.38■■■■□ 3.89
AC112229.4-201ENST00000488671 POLA1P09884 1462 aaPredicted RBP39.37■■■■□ 3.89
AC112229.4-201ENST00000488671 FGD5Q6ZNL6 1462 aa39.34■■■■□ 3.89
AC112229.4-201ENST00000488671 SYNJ1O43426 1573 aa39.32■■■■□ 3.88
AC112229.4-201ENST00000488671 IFT140Q96RY7 1462 aa39.29■■■■□ 3.88
AC112229.4-201ENST00000488671 RAD54L2Q9Y4B4 1467 aa39.26■■■■□ 3.88
AC112229.4-201ENST00000488671 TOP2BQ02880 1626 aa39.24■■■■□ 3.87
AC112229.4-201ENST00000488671 BIVM-ERCC5R4GMW8 1640 aa39.23■■■■□ 3.87
AC112229.4-201ENST00000488671 SOGA1O94964 1423 aa39.22■■■■□ 3.87
AC112229.4-201ENST00000488671 TARBP1Q13395 1621 aaKnown RBP39.22■■■■□ 3.87
AC112229.4-201ENST00000488671 ZNF608Q9ULD9 1512 aaPredicted RBP39.19■■■■□ 3.86
AC112229.4-201ENST00000488671 EIF4G3O43432 1585 aaKnown RBP39.03■■■■□ 3.84
AC112229.4-201ENST00000488671 AQRO60306 1485 aaKnown RBP eCLIP39.02■■■■□ 3.84
AC112229.4-201ENST00000488671 TDRD9Q8NDG6 1382 aaKnown RBP39.01■■■■□ 3.84
AC112229.4-201ENST00000488671 WDR97A6NE52 1622 aa38.98■■■■□ 3.83
AC112229.4-201ENST00000488671 ABCA10Q8WWZ4 1543 aa38.91■■■■□ 3.82
AC112229.4-201ENST00000488671 GAPVD1Q14C86 1478 aa38.77■■■■□ 3.8
AC112229.4-201ENST00000488671 ABCA5Q8WWZ7 1642 aa38.76■■■■□ 3.79
AC112229.4-201ENST00000488671 TRIM41Q8WV44 630 aa38.75■■■■□ 3.79
AC112229.4-201ENST00000488671 PBRM1Q86U86 1689 aa38.71■■■■□ 3.79
AC112229.4-201ENST00000488671 GRIN2BQ13224 1484 aa38.68■■■■□ 3.78
AC112229.4-201ENST00000488671 SNAPC4Q5SXM2 1469 aa38.64■■■■□ 3.78
AC112229.4-201ENST00000488671 FBLN2P98095 1184 aa38.56■■■■□ 3.76
AC112229.4-201ENST00000488671 CHD1O14646 1710 aa38.52■■■■□ 3.76
AC112229.4-201ENST00000488671 CHIC1Q5VXU3 224 aa38.52■■■■□ 3.76
AC112229.4-201ENST00000488671 MAGI1Q96QZ7 1491 aaPredicted RBP38.51■■■■□ 3.76
AC112229.4-201ENST00000488671 KIF27Q86VH2 1401 aa38.5■■■■□ 3.75
AC112229.4-201ENST00000488671 ERICH3Q5RHP9 1530 aa38.44■■■■□ 3.74
AC112229.4-201ENST00000488671 CHMP7Q8WUX9 453 aaPredicted RBP38.42■■■■□ 3.74
AC112229.4-201ENST00000488671 OSCARQ8IYS5 282 aa38.4■■■■□ 3.74
AC112229.4-201ENST00000488671 RUSC2Q8N2Y8 1516 aa38.4■■■■□ 3.74
AC112229.4-201ENST00000488671 SYNJ2O15056 1496 aa38.38■■■■□ 3.73
AC112229.4-201ENST00000488671 ADAMTS12P58397 1594 aa38.38■■■■□ 3.73
AC112229.4-201ENST00000488671 DNAJC5Q9H3Z4 198 aa38.36■■■■□ 3.73
AC112229.4-201ENST00000488671 IGF1RP08069 1367 aa38.33■■■■□ 3.73
AC112229.4-201ENST00000488671 FHAD1B1AJZ9 1412 aa38.29■■■■□ 3.72
AC112229.4-201ENST00000488671 GRIN2AQ12879 1464 aa38.2■■■■□ 3.71
AC112229.4-201ENST00000488671 CUL7Q14999 1698 aa38.18■■■■□ 3.7
AC112229.4-201ENST00000488671 CARMIL1Q5VZK9 1371 aa38.12■■■■□ 3.69
AC112229.4-201ENST00000488671 FAM9AQ8IZU1 332 aaPredicted RBP38.08■■■■□ 3.69
AC112229.4-201ENST00000488671 CEP170Q5SW79 1584 aa38.04■■■■□ 3.68
AC112229.4-201ENST00000488671 CLASP1Q7Z460 1538 aa38■■■■□ 3.67
AC112229.4-201ENST00000488671 NUP160Q12769 1436 aa37.97■■■■□ 3.67
AC112229.4-201ENST00000488671 CSRNP3Q8WYN3 585 aa37.94■■■■□ 3.66
AC112229.4-201ENST00000488671 EEA1Q15075 1411 aa37.92■■■■□ 3.66
AC112229.4-201ENST00000488671 RAPGEF2Q9Y4G8 1499 aa37.91■■■■□ 3.66
AC112229.4-201ENST00000488671 PRXQ9BXM0 1461 aa37.84■■■■□ 3.65
AC112229.4-201ENST00000488671 RIMBP3CA6NJZ7 1639 aa37.8■■■■□ 3.64
AC112229.4-201ENST00000488671 RIMBP3BA6NNM3 1639 aa37.8■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms