RNA–Protein interactions for RNA: ENST00000277010.8

SIGMAR1-201, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIGMAR1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-201ENST00000277010 NISCHQ9Y2I1 1504 aa54.5■■■■■ 6.32
SIGMAR1-201ENST00000277010 CCDC180Q9P1Z9 1646 aa48.14■■■■■ 5.3
SIGMAR1-201ENST00000277010 ABCC9O60706 1549 aa46.81■■■■■ 5.08
SIGMAR1-201ENST00000277010 ZCCHC6Q5VYS8 1495 aaKnown RBP45.5■■■■■ 4.87
SIGMAR1-201ENST00000277010 DCAF8L2P0C7V8 631 aa45.47■■■■■ 4.87
SIGMAR1-201ENST00000277010 NACADO15069 1562 aa45.19■■■■■ 4.83
SIGMAR1-201ENST00000277010 RB1CC1Q8TDY2 1594 aa45.14■■■■■ 4.82
SIGMAR1-201ENST00000277010 MYO15BQ96JP2 1530 aa45.05■■■■■ 4.8
SIGMAR1-201ENST00000277010 DCAF1Q9Y4B6 1507 aa45.05■■■■■ 4.8
SIGMAR1-201ENST00000277010 SCRIBQ14160 1630 aa44.09■■■■■ 4.65
SIGMAR1-201ENST00000277010 UNC13AQ9UPW8 1703 aa44.09■■■■■ 4.65
SIGMAR1-201ENST00000277010 PABPN1Q86U42 306 aaKnown RBP eCLIP43.88■■■■■ 4.617e-7■■■■□ 25.6
SIGMAR1-201ENST00000277010 BICRAQ9NZM4 1560 aa43.79■■■■■ 4.6
SIGMAR1-201ENST00000277010 SHROOM4Q9ULL8 1493 aa43.48■■■■■ 4.55
SIGMAR1-201ENST00000277010 EIF4G1Q04637 1599 aaKnown RBP42.6■■■■■ 4.41
SIGMAR1-201ENST00000277010 DNAJC5BQ9UF47 199 aa42.57■■■■■ 4.41
SIGMAR1-201ENST00000277010 CECR2Q9BXF3 1484 aa42.47■■■■■ 4.39
SIGMAR1-201ENST00000277010 CC2D2AQ9P2K1 1620 aa42.31■■■■■ 4.36
SIGMAR1-201ENST00000277010 BAZ1AQ9NRL2 1556 aaPredicted RBP42.19■■■■■ 4.34
SIGMAR1-201ENST00000277010 SMARCA4P51532 1647 aa42.17■■■■■ 4.34
SIGMAR1-201ENST00000277010 MROH2BQ7Z745 1585 aa42.05■■■■■ 4.32
SIGMAR1-201ENST00000277010 ATAD2BQ9ULI0 1458 aa41.85■■■■■ 4.29
SIGMAR1-201ENST00000277010 SMARCA2P51531 1590 aa41.78■■■■■ 4.28
SIGMAR1-201ENST00000277010 RSF1Q96T23 1441 aaPredicted RBP41.75■■■■■ 4.27
SIGMAR1-201ENST00000277010 NCAPD3P42695 1498 aa41.73■■■■■ 4.27
SIGMAR1-201ENST00000277010 PEG3Q9GZU2 1588 aa41.72■■■■■ 4.27
SIGMAR1-201ENST00000277010 WIZO95785 1651 aa41.6■■■■■ 4.25
SIGMAR1-201ENST00000277010 HMGXB3Q12766 1538 aa41.54■■■■■ 4.24
SIGMAR1-201ENST00000277010 BAZ1BQ9UIG0 1483 aaKnown RBP41.54■■■■■ 4.24
SIGMAR1-201ENST00000277010 TOP2AP11388 1531 aaKnown RBP41.16■■■■■ 4.18
SIGMAR1-201ENST00000277010 SUPT5HO00267 1087 aaKnown RBP41.14■■■■■ 4.18
SIGMAR1-201ENST00000277010 CCDC88BA6NC98 1476 aa40.72■■■■■ 4.11
SIGMAR1-201ENST00000277010 NESP48681 1621 aa40.65■■■■■ 4.1
SIGMAR1-201ENST00000277010 CADPSQ9ULU8 1353 aa40.57■■■■■ 4.09
SIGMAR1-201ENST00000277010 LAMC3Q9Y6N6 1575 aa40.53■■■■■ 4.08
SIGMAR1-201ENST00000277010 CFTRP13569 1480 aa40.42■■■■■ 4.06
SIGMAR1-201ENST00000277010 ERCC6Q03468 1493 aa40.29■■■■■ 4.04
SIGMAR1-201ENST00000277010 PDS5BQ9NTI5 1447 aa40.28■■■■■ 4.04
SIGMAR1-201ENST00000277010 FANCD2Q9BXW9 1451 aa40.11■■■■■ 4.01
SIGMAR1-201ENST00000277010 KIF21AQ7Z4S6 1674 aa40.1■■■■■ 4.01
SIGMAR1-201ENST00000277010 PRDM2Q13029 1718 aa40.02■■■■■ 4
SIGMAR1-201ENST00000277010 CEP164Q9UPV0 1460 aa40.01■■■■□ 3.99
SIGMAR1-201ENST00000277010 THOC2Q8NI27 1593 aaKnown RBP39.86■■■■□ 3.97
SIGMAR1-201ENST00000277010 MRC2Q9UBG0 1479 aa39.83■■■■□ 3.97
SIGMAR1-201ENST00000277010 URB2Q14146 1524 aaKnown RBP39.69■■■■□ 3.94
SIGMAR1-201ENST00000277010 WDR62O43379 1518 aa39.67■■■■□ 3.94
SIGMAR1-201ENST00000277010 CUX2O14529 1486 aa39.62■■■■□ 3.93
SIGMAR1-201ENST00000277010 TOPBP1Q92547 1522 aa39.51■■■■□ 3.92
SIGMAR1-201ENST00000277010 ABCC8Q09428 1581 aa39.47■■■■□ 3.91
SIGMAR1-201ENST00000277010 DNMBPQ6XZF7 1577 aa39.47■■■■□ 3.91
SIGMAR1-201ENST00000277010 CUX1P39880 1505 aa39.41■■■■□ 3.9
SIGMAR1-201ENST00000277010 WRNQ14191 1432 aaPredicted RBP eCLIP39.35■■■■□ 3.89
SIGMAR1-201ENST00000277010 POLA1P09884 1462 aaPredicted RBP39.23■■■■□ 3.87
SIGMAR1-201ENST00000277010 SYNJ1O43426 1573 aa39.21■■■■□ 3.87
SIGMAR1-201ENST00000277010 FGD5Q6ZNL6 1462 aa39.2■■■■□ 3.87
SIGMAR1-201ENST00000277010 TOP2BQ02880 1626 aa39.16■■■■□ 3.86
SIGMAR1-201ENST00000277010 IFT140Q96RY7 1462 aa39.13■■■■□ 3.85
SIGMAR1-201ENST00000277010 BIVM-ERCC5R4GMW8 1640 aa39.13■■■■□ 3.85
SIGMAR1-201ENST00000277010 RAD54L2Q9Y4B4 1467 aa39.08■■■■□ 3.85
SIGMAR1-201ENST00000277010 SOGA1O94964 1423 aa39.08■■■■□ 3.85
SIGMAR1-201ENST00000277010 TARBP1Q13395 1621 aaKnown RBP39.02■■■■□ 3.84
SIGMAR1-201ENST00000277010 ZNF608Q9ULD9 1512 aaPredicted RBP38.97■■■■□ 3.83
SIGMAR1-201ENST00000277010 TDRD9Q8NDG6 1382 aaKnown RBP38.84■■■■□ 3.81
SIGMAR1-201ENST00000277010 AQRO60306 1485 aaKnown RBP eCLIP38.82■■■■□ 3.812e-8■■■■■ 30.3
SIGMAR1-201ENST00000277010 ABCA10Q8WWZ4 1543 aa38.82■■■■□ 3.81
SIGMAR1-201ENST00000277010 TRIM41Q8WV44 630 aa38.79■■■■□ 3.8
SIGMAR1-201ENST00000277010 EIF4G3O43432 1585 aaKnown RBP38.78■■■■□ 3.8
SIGMAR1-201ENST00000277010 WDR97A6NE52 1622 aa38.78■■■■□ 3.8
SIGMAR1-201ENST00000277010 CHIC1Q5VXU3 224 aa38.64■■■■□ 3.78
SIGMAR1-201ENST00000277010 GAPVD1Q14C86 1478 aa38.62■■■■□ 3.77
SIGMAR1-201ENST00000277010 ABCA5Q8WWZ7 1642 aa38.61■■■■□ 3.77
SIGMAR1-201ENST00000277010 GRIN2BQ13224 1484 aa38.54■■■■□ 3.76
SIGMAR1-201ENST00000277010 KIF27Q86VH2 1401 aa38.47■■■■□ 3.75
SIGMAR1-201ENST00000277010 SNAPC4Q5SXM2 1469 aa38.45■■■■□ 3.75
SIGMAR1-201ENST00000277010 PBRM1Q86U86 1689 aa38.45■■■■□ 3.75
SIGMAR1-201ENST00000277010 MAGI1Q96QZ7 1491 aaPredicted RBP38.37■■■■□ 3.73
SIGMAR1-201ENST00000277010 ERICH3Q5RHP9 1530 aa38.34■■■■□ 3.73
SIGMAR1-201ENST00000277010 RUSC2Q8N2Y8 1516 aa38.33■■■■□ 3.73
SIGMAR1-201ENST00000277010 FBLN2P98095 1184 aa38.3■■■■□ 3.72
SIGMAR1-201ENST00000277010 IGF1RP08069 1367 aa38.28■■■■□ 3.72
SIGMAR1-201ENST00000277010 CHMP7Q8WUX9 453 aaPredicted RBP38.23■■■■□ 3.71
SIGMAR1-201ENST00000277010 SYNJ2O15056 1496 aa38.23■■■■□ 3.71
SIGMAR1-201ENST00000277010 ADAMTS12P58397 1594 aa38.21■■■■□ 3.71
SIGMAR1-201ENST00000277010 FHAD1B1AJZ9 1412 aa38.19■■■■□ 3.7
SIGMAR1-201ENST00000277010 CHD1O14646 1710 aa38.17■■■■□ 3.7
SIGMAR1-201ENST00000277010 OSCARQ8IYS5 282 aa38.14■■■■□ 3.7
SIGMAR1-201ENST00000277010 CUL7Q14999 1698 aa38.06■■■■□ 3.68
SIGMAR1-201ENST00000277010 CARMIL1Q5VZK9 1371 aa38.06■■■■□ 3.68
SIGMAR1-201ENST00000277010 GRIN2AQ12879 1464 aa38.05■■■■□ 3.68
SIGMAR1-201ENST00000277010 FAM9AQ8IZU1 332 aaPredicted RBP38.04■■■■□ 3.68
SIGMAR1-201ENST00000277010 EEA1Q15075 1411 aa38.01■■■■□ 3.68
SIGMAR1-201ENST00000277010 CSRNP3Q8WYN3 585 aa37.97■■■■□ 3.67
SIGMAR1-201ENST00000277010 DNAJC5Q9H3Z4 198 aa37.9■■■■□ 3.66
SIGMAR1-201ENST00000277010 RAPGEF2Q9Y4G8 1499 aa37.87■■■■□ 3.65
SIGMAR1-201ENST00000277010 NUP160Q12769 1436 aa37.85■■■■□ 3.65
SIGMAR1-201ENST00000277010 PRXQ9BXM0 1461 aa37.85■■■■□ 3.65
SIGMAR1-201ENST00000277010 CEP170Q5SW79 1584 aa37.85■■■■□ 3.65
SIGMAR1-201ENST00000277010 CLASP1Q7Z460 1538 aa37.78■■■■□ 3.64
SIGMAR1-201ENST00000277010 KIAA0586Q9BVV6 1533 aa37.61■■■■□ 3.61
SIGMAR1-201ENST00000277010 KIF21BO75037 1637 aa37.58■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms