Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NDUFA1O15239 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA1O15239 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA1O15239 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC15.74■□□□□ 0.11
NDUFA1O15239 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NDUFA1O15239 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA1O15239 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA1O15239 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA1O15239 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA1O15239 LSR-205ENST00000427250 1606 ntTSL 2 BASIC15.73■□□□□ 0.11
NDUFA1O15239 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA1O15239 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NDUFA1O15239 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.73■□□□□ 0.11
NDUFA1O15239 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA1O15239 PFN2-211ENST00000489155 636 ntTSL 4 BASIC15.73■□□□□ 0.11
NDUFA1O15239 MIR3960-201ENST00000583311 91 ntBASIC15.73■□□□□ 0.11
NDUFA1O15239 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA1O15239 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA1O15239 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA1O15239 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA1O15239 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA1O15239 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA1O15239 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.72■□□□□ 0.11
NDUFA1O15239 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NDUFA1O15239 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC15.72■□□□□ 0.11
NDUFA1O15239 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC15.72■□□□□ 0.11
NDUFA1O15239 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC15.72■□□□□ 0.11
NDUFA1O15239 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 AC233723.2-201ENST00000623798 2106 ntBASIC15.72■□□□□ 0.11
NDUFA1O15239 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA1O15239 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC15.71■□□□□ 0.11
NDUFA1O15239 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA1O15239 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.71■□□□□ 0.11
NDUFA1O15239 TPT1-202ENST00000379055 948 ntTSL 2 BASIC15.71■□□□□ 0.11
NDUFA1O15239 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.71■□□□□ 0.11
NDUFA1O15239 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC15.71■□□□□ 0.11
NDUFA1O15239 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NDUFA1O15239 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA1O15239 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA1O15239 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
NDUFA1O15239 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.71■□□□□ 0.11
NDUFA1O15239 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC15.71■□□□□ 0.1
NDUFA1O15239 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NDUFA1O15239 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NDUFA1O15239 REST-210ENST00000638187 1334 ntTSL 5 BASIC15.7■□□□□ 0.1
NDUFA1O15239 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA1O15239 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA1O15239 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NDUFA1O15239 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA1O15239 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NDUFA1O15239 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA1O15239 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA1O15239 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NDUFA1O15239 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA1O15239 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
NDUFA1O15239 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NDUFA1O15239 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NDUFA1O15239 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA1O15239 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA1O15239 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA1O15239 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA1O15239 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC15.69■□□□□ 0.1
NDUFA1O15239 MIR7108-201ENST00000614319 87 ntBASIC15.69■□□□□ 0.1
NDUFA1O15239 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC15.69■□□□□ 0.1
NDUFA1O15239 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA1O15239 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA1O15239 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFA1O15239 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA1O15239 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA1O15239 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NDUFA1O15239 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA1O15239 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA1O15239 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA1O15239 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC15.68■□□□□ 0.1
NDUFA1O15239 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA1O15239 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA1O15239 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA1O15239 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA1O15239 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA1O15239 AC025884.2-201ENST00000553429 711 ntBASIC15.68■□□□□ 0.1
NDUFA1O15239 AC060814.1-201ENST00000554326 538 ntBASIC15.68■□□□□ 0.1
NDUFA1O15239 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC15.68■□□□□ 0.1
NDUFA1O15239 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA1O15239 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms