RNA–Protein interactions for RNA: ENST00000216780.8

PCK2-201, Transcript of phosphoenolpyruvate carboxykinase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCK2, Length 2,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK2-201ENST00000216780 NISCHQ9Y2I1 1504 aa48.69■■■■■ 5.38
PCK2-201ENST00000216780 CCDC180Q9P1Z9 1646 aa41.87■■■■■ 4.29
PCK2-201ENST00000216780 ZCCHC6Q5VYS8 1495 aaKnown RBP41.06■■■■■ 4.16
PCK2-201ENST00000216780 SHROOM4Q9ULL8 1493 aa40.67■■■■■ 4.1
PCK2-201ENST00000216780 DCAF8L2P0C7V8 631 aa40.25■■■■■ 4.03
PCK2-201ENST00000216780 DCAF1Q9Y4B6 1507 aa40.09■■■■■ 4.01
PCK2-201ENST00000216780 SUPT5HO00267 1087 aaKnown RBP39.53■■■■□ 3.92
PCK2-201ENST00000216780 MYO15BQ96JP2 1530 aa39.24■■■■□ 3.87
PCK2-201ENST00000216780 ABCC9O60706 1549 aa39.17■■■■□ 3.86
PCK2-201ENST00000216780 SCRIBQ14160 1630 aa38.92■■■■□ 3.82
PCK2-201ENST00000216780 NACADO15069 1562 aa38.84■■■■□ 3.81
PCK2-201ENST00000216780 RB1CC1Q8TDY2 1594 aa38.34■■■■□ 3.73
PCK2-201ENST00000216780 CHIC1Q5VXU3 224 aa38.2■■■■□ 3.71
PCK2-201ENST00000216780 RSF1Q96T23 1441 aaPredicted RBP38.19■■■■□ 3.7
PCK2-201ENST00000216780 CECR2Q9BXF3 1484 aa37.93■■■■□ 3.66
PCK2-201ENST00000216780 MROH2BQ7Z745 1585 aa37.76■■■■□ 3.64
PCK2-201ENST00000216780 UNC13AQ9UPW8 1703 aa37.72■■■■□ 3.63
PCK2-201ENST00000216780 WIZO95785 1651 aa37.51■■■■□ 3.59
PCK2-201ENST00000216780 BAZ1AQ9NRL2 1556 aaPredicted RBP37.47■■■■□ 3.59
PCK2-201ENST00000216780 BICRAQ9NZM4 1560 aa37.3■■■■□ 3.56
PCK2-201ENST00000216780 SMARCA4P51532 1647 aa37.24■■■■□ 3.55
PCK2-201ENST00000216780 PABPN1Q86U42 306 aaKnown RBP eCLIP37.22■■■■□ 3.55
PCK2-201ENST00000216780 TOP2AP11388 1531 aaKnown RBP37■■■■□ 3.51
PCK2-201ENST00000216780 TRIM41Q8WV44 630 aa36.97■■■■□ 3.51
PCK2-201ENST00000216780 LOC105371045A0A1W2PR82 267 aa36.92■■■■□ 3.5
PCK2-201ENST00000216780 EIF4G1Q04637 1599 aaKnown RBP36.78■■■■□ 3.48
PCK2-201ENST00000216780 CCDC88BA6NC98 1476 aa36.76■■■■□ 3.47
PCK2-201ENST00000216780 SMARCA2P51531 1590 aa36.74■■■■□ 3.47
PCK2-201ENST00000216780 PEG3Q9GZU2 1588 aa36.65■■■■□ 3.46
PCK2-201ENST00000216780 FAM9AQ8IZU1 332 aaPredicted RBP36.51■■■■□ 3.44
PCK2-201ENST00000216780 ATAD2BQ9ULI0 1458 aa36.45■■■■□ 3.43
PCK2-201ENST00000216780 ABCC8Q09428 1581 aa36.34■■■■□ 3.41
PCK2-201ENST00000216780 BAZ1BQ9UIG0 1483 aaKnown RBP36.28■■■■□ 3.4
PCK2-201ENST00000216780 PCGF6Q9BYE7 350 aa36.11■■■■□ 3.37
PCK2-201ENST00000216780 EHMT2Q96KQ7 1210 aa36.11■■■■□ 3.37
PCK2-201ENST00000216780 NCAPD3P42695 1498 aa35.92■■■■□ 3.34
PCK2-201ENST00000216780 WRNQ14191 1432 aaPredicted RBP eCLIP35.89■■■■□ 3.34
PCK2-201ENST00000216780 HMGXB3Q12766 1538 aa35.88■■■■□ 3.34
PCK2-201ENST00000216780 SOGA1O94964 1423 aa35.85■■■■□ 3.33
PCK2-201ENST00000216780 SYNJ1O43426 1573 aa35.75■■■■□ 3.31
PCK2-201ENST00000216780 TRIM26Q12899 539 aaPredicted RBP35.73■■■■□ 3.31
PCK2-201ENST00000216780 RUSC2Q8N2Y8 1516 aa35.71■■■■□ 3.31
PCK2-201ENST00000216780 HRCP23327 699 aa35.68■■■■□ 3.3
PCK2-201ENST00000216780 EEA1Q15075 1411 aa35.68■■■■□ 3.3
PCK2-201ENST00000216780 CSRNP3Q8WYN3 585 aa35.6■■■■□ 3.29
PCK2-201ENST00000216780 TOP2BQ02880 1626 aa35.43■■■■□ 3.26
PCK2-201ENST00000216780 TNIKQ9UKE5 1360 aa35.41■■■■□ 3.26
PCK2-201ENST00000216780 CFTRP13569 1480 aa35.39■■■■□ 3.26
PCK2-201ENST00000216780 CC2D2AQ9P2K1 1620 aa35.37■■■■□ 3.25
PCK2-201ENST00000216780 CEP162Q5TB80 1403 aa35.36■■■■□ 3.25
PCK2-201ENST00000216780 BIVM-ERCC5R4GMW8 1640 aa35.35■■■■□ 3.25
PCK2-201ENST00000216780 GOLGA3Q08378 1498 aa35.34■■■■□ 3.25
PCK2-201ENST00000216780 UBTFP17480 764 aaKnown RBP35.3■■■■□ 3.24
PCK2-201ENST00000216780 CEP164Q9UPV0 1460 aa35.24■■■■□ 3.23
PCK2-201ENST00000216780 KIF21BO75037 1637 aa35.23■■■■□ 3.23
PCK2-201ENST00000216780 CUX1P39880 1505 aa35.22■■■■□ 3.23
PCK2-201ENST00000216780 PPARGC1BQ86YN6 1023 aaKnown RBP35.22■■■■□ 3.23
PCK2-201ENST00000216780 PRDM2Q13029 1718 aa35.14■■■■□ 3.22
PCK2-201ENST00000216780 CADPSQ9ULU8 1353 aa35.12■■■■□ 3.21
PCK2-201ENST00000216780 RAPGEF2Q9Y4G8 1499 aa35.04■■■■□ 3.2
PCK2-201ENST00000216780 CLIP1P30622 1438 aa34.87■■■■□ 3.17
PCK2-201ENST00000216780 PRXQ9BXM0 1461 aa34.86■■■■□ 3.17
PCK2-201ENST00000216780 KIF27Q86VH2 1401 aa34.86■■■■□ 3.17
PCK2-201ENST00000216780 ERICH3Q5RHP9 1530 aa34.82■■■■□ 3.16
PCK2-201ENST00000216780 TTBK1Q5TCY1 1321 aaPredicted RBP34.77■■■■□ 3.16
PCK2-201ENST00000216780 FANCD2Q9BXW9 1451 aa34.76■■■■□ 3.16
PCK2-201ENST00000216780 FGD5Q6ZNL6 1462 aa34.69■■■■□ 3.14
PCK2-201ENST00000216780 NESP48681 1621 aa34.69■■■■□ 3.14
PCK2-201ENST00000216780 RANGAP1P46060 587 aaPredicted RBP34.66■■■■□ 3.14
PCK2-201ENST00000216780 CUX2O14529 1486 aa34.65■■■■□ 3.14
PCK2-201ENST00000216780 VPS8Q8N3P4 1428 aa34.65■■■■□ 3.14
PCK2-201ENST00000216780 ZEB1P37275 1124 aaPredicted RBP34.63■■■■□ 3.13
PCK2-201ENST00000216780 IGF1RP08069 1367 aa34.54■■■■□ 3.12
PCK2-201ENST00000216780 DNMBPQ6XZF7 1577 aa34.53■■■■□ 3.12
PCK2-201ENST00000216780 DNAJC5BQ9UF47 199 aa34.51■■■■□ 3.12
PCK2-201ENST00000216780 LAMC3Q9Y6N6 1575 aa34.51■■■■□ 3.12
PCK2-201ENST00000216780 TOPBP1Q92547 1522 aa34.48■■■■□ 3.11
PCK2-201ENST00000216780 ARAP1Q96P48 1450 aa34.44■■■■□ 3.1
PCK2-201ENST00000216780 POLA1P09884 1462 aaPredicted RBP34.4■■■■□ 3.1
PCK2-201ENST00000216780 RAD54L2Q9Y4B4 1467 aa34.39■■■■□ 3.1
PCK2-201ENST00000216780 CARMIL1Q5VZK9 1371 aa34.37■■■■□ 3.09
PCK2-201ENST00000216780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.36■■■■□ 3.09
PCK2-201ENST00000216780 APLP2Q06481 763 aa34.35■■■■□ 3.09
PCK2-201ENST00000216780 ABCA10Q8WWZ4 1543 aa34.33■■■■□ 3.09
PCK2-201ENST00000216780 URB2Q14146 1524 aaKnown RBP34.31■■■■□ 3.08
PCK2-201ENST00000216780 ARHGAP35Q9NRY4 1499 aa34.27■■■■□ 3.08
PCK2-201ENST00000216780 PDS5BQ9NTI5 1447 aa34.26■■■■□ 3.08
PCK2-201ENST00000216780 CCER1Q8TC90 406 aaPredicted RBP34.25■■■■□ 3.07
PCK2-201ENST00000216780 KIF21AQ7Z4S6 1674 aa34.16■■■■□ 3.06
PCK2-201ENST00000216780 WDR97A6NE52 1622 aa34.12■■■■□ 3.05
PCK2-201ENST00000216780 KANK4Q5T7N3 995 aaPredicted RBP34.05■■■■□ 3.04
PCK2-201ENST00000216780 CUL7Q14999 1698 aa34.04■■■■□ 3.04
PCK2-201ENST00000216780 HNRNPUL2Q1KMD3 747 aaKnown RBP34.02■■■■□ 3.04
PCK2-201ENST00000216780 TDRD9Q8NDG6 1382 aaKnown RBP33.98■■■■□ 3.03
PCK2-201ENST00000216780 ABCA5Q8WWZ7 1642 aa33.98■■■■□ 3.03
PCK2-201ENST00000216780 GAPVD1Q14C86 1478 aa33.91■■■■□ 3.02
PCK2-201ENST00000216780 TARBP1Q13395 1621 aaKnown RBP33.87■■■■□ 3.01
PCK2-201ENST00000216780 CTTNBP2Q8WZ74 1663 aa33.83■■■■□ 3.01
PCK2-201ENST00000216780 P3H3Q8IVL6 736 aa33.82■■■■□ 3
PCK2-201ENST00000216780 MRC2Q9UBG0 1479 aa33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms