Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRABD2BA6NFA1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRABD2BA6NFA1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.25■■□□□ 1.15
TRABD2BA6NFA1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TRABD2BA6NFA1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRABD2BA6NFA1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRABD2BA6NFA1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRABD2BA6NFA1 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.25■■□□□ 1.15
TRABD2BA6NFA1 CA15P2-201ENST00000611168 834 ntBASIC22.25■■□□□ 1.15
TRABD2BA6NFA1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRABD2BA6NFA1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TRABD2BA6NFA1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRABD2BA6NFA1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.24■■□□□ 1.15
TRABD2BA6NFA1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRABD2BA6NFA1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRABD2BA6NFA1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.24■■□□□ 1.15
TRABD2BA6NFA1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.24■■□□□ 1.15
TRABD2BA6NFA1 AC090192.1-201ENST00000517740 490 ntBASIC22.24■■□□□ 1.15
TRABD2BA6NFA1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.24■■□□□ 1.15
TRABD2BA6NFA1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRABD2BA6NFA1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRABD2BA6NFA1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.23■■□□□ 1.15
TRABD2BA6NFA1 SYT6-210ENST00000641643 1587 ntBASIC22.23■■□□□ 1.15
TRABD2BA6NFA1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRABD2BA6NFA1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRABD2BA6NFA1 RASA4CP-201ENST00000424092 1398 ntBASIC22.23■■□□□ 1.15
TRABD2BA6NFA1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
TRABD2BA6NFA1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.22■■□□□ 1.15
TRABD2BA6NFA1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRABD2BA6NFA1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRABD2BA6NFA1 MIR4767-201ENST00000582827 78 ntBASIC22.22■■□□□ 1.15
TRABD2BA6NFA1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.22■■□□□ 1.15
TRABD2BA6NFA1 RARRES2P11-201ENST00000635158 484 ntBASIC22.22■■□□□ 1.15
TRABD2BA6NFA1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TRABD2BA6NFA1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.22■■□□□ 1.15
TRABD2BA6NFA1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.21■■□□□ 1.15
TRABD2BA6NFA1 FOXO3B-201ENST00000395675 1928 ntBASIC22.21■■□□□ 1.15
TRABD2BA6NFA1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.21■■□□□ 1.15
TRABD2BA6NFA1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TRABD2BA6NFA1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRABD2BA6NFA1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.21■■□□□ 1.15
TRABD2BA6NFA1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.21■■□□□ 1.15
TRABD2BA6NFA1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TRABD2BA6NFA1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRABD2BA6NFA1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRABD2BA6NFA1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
TRABD2BA6NFA1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TRABD2BA6NFA1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRABD2BA6NFA1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRABD2BA6NFA1 AP004609.3-201ENST00000610705 1884 ntBASIC22.2■■□□□ 1.14
TRABD2BA6NFA1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
TRABD2BA6NFA1 IRS3P-201ENST00000223076 1006 ntBASIC22.2■■□□□ 1.14
TRABD2BA6NFA1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
TRABD2BA6NFA1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRABD2BA6NFA1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRABD2BA6NFA1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.19■■□□□ 1.14
TRABD2BA6NFA1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRABD2BA6NFA1 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.19■■□□□ 1.14
TRABD2BA6NFA1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.19■■□□□ 1.14
TRABD2BA6NFA1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.19■■□□□ 1.14
TRABD2BA6NFA1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.19■■□□□ 1.14
TRABD2BA6NFA1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
TRABD2BA6NFA1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRABD2BA6NFA1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRABD2BA6NFA1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.19■■□□□ 1.14
TRABD2BA6NFA1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRABD2BA6NFA1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRABD2BA6NFA1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.18■■□□□ 1.14
TRABD2BA6NFA1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRABD2BA6NFA1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
TRABD2BA6NFA1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRABD2BA6NFA1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.18■■□□□ 1.14
TRABD2BA6NFA1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.18■■□□□ 1.14
TRABD2BA6NFA1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.18■■□□□ 1.14
TRABD2BA6NFA1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.18■■□□□ 1.14
TRABD2BA6NFA1 AC090877.2-201ENST00000558441 1738 ntBASIC22.17■■□□□ 1.14
TRABD2BA6NFA1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRABD2BA6NFA1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
TRABD2BA6NFA1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
TRABD2BA6NFA1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.17■■□□□ 1.14
TRABD2BA6NFA1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRABD2BA6NFA1 AC092171.4-201ENST00000609130 632 ntBASIC22.17■■□□□ 1.14
TRABD2BA6NFA1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRABD2BA6NFA1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRABD2BA6NFA1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
TRABD2BA6NFA1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRABD2BA6NFA1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.16■■□□□ 1.14
TRABD2BA6NFA1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRABD2BA6NFA1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRABD2BA6NFA1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.16■■□□□ 1.14
TRABD2BA6NFA1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRABD2BA6NFA1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.16■■□□□ 1.14
TRABD2BA6NFA1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
TRABD2BA6NFA1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRABD2BA6NFA1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.15■■□□□ 1.14
TRABD2BA6NFA1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRABD2BA6NFA1 AC027682.1-201ENST00000562846 899 ntBASIC22.15■■□□□ 1.14
TRABD2BA6NFA1 AC008764.7-201ENST00000593779 1081 ntBASIC22.15■■□□□ 1.14
TRABD2BA6NFA1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.15■■□□□ 1.14
TRABD2BA6NFA1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms