RNA–Protein interactions for RNA: ENST00000569276.1

TMEM170A-206, Transcript of transmembrane protein 170A, humanhuman

TSL 2 BASIC

Gene TMEM170A, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-206ENST00000569276 NISCHQ9Y2I1 1504 aa54.99■■■■■ 6.39
TMEM170A-206ENST00000569276 CCDC180Q9P1Z9 1646 aa48.63■■■■■ 5.38
TMEM170A-206ENST00000569276 ABCC9O60706 1549 aa47.23■■■■■ 5.15
TMEM170A-206ENST00000569276 ZCCHC6Q5VYS8 1495 aaKnown RBP45.89■■■■■ 4.94
TMEM170A-206ENST00000569276 DCAF8L2P0C7V8 631 aa45.76■■■■■ 4.92
TMEM170A-206ENST00000569276 NACADO15069 1562 aa45.71■■■■■ 4.91
TMEM170A-206ENST00000569276 MYO15BQ96JP2 1530 aa45.66■■■■■ 4.9
TMEM170A-206ENST00000569276 RB1CC1Q8TDY2 1594 aa45.62■■■■■ 4.89
TMEM170A-206ENST00000569276 DCAF1Q9Y4B6 1507 aa45.57■■■■■ 4.89
TMEM170A-206ENST00000569276 UNC13AQ9UPW8 1703 aa44.36■■■■■ 4.69
TMEM170A-206ENST00000569276 SCRIBQ14160 1630 aa44.36■■■■■ 4.69
TMEM170A-206ENST00000569276 PABPN1Q86U42 306 aaKnown RBP eCLIP44.23■■■■■ 4.67
TMEM170A-206ENST00000569276 BICRAQ9NZM4 1560 aa44.18■■■■■ 4.66
TMEM170A-206ENST00000569276 SHROOM4Q9ULL8 1493 aa43.92■■■■■ 4.62
TMEM170A-206ENST00000569276 DNAJC5BQ9UF47 199 aa43.13■■■■■ 4.49
TMEM170A-206ENST00000569276 EIF4G1Q04637 1599 aaKnown RBP43.02■■■■■ 4.48
TMEM170A-206ENST00000569276 CECR2Q9BXF3 1484 aa42.76■■■■■ 4.44
TMEM170A-206ENST00000569276 CC2D2AQ9P2K1 1620 aa42.7■■■■■ 4.43
TMEM170A-206ENST00000569276 BAZ1AQ9NRL2 1556 aaPredicted RBP42.6■■■■■ 4.41
TMEM170A-206ENST00000569276 SMARCA4P51532 1647 aa42.52■■■■■ 4.4
TMEM170A-206ENST00000569276 MROH2BQ7Z745 1585 aa42.35■■■■■ 4.37
TMEM170A-206ENST00000569276 ATAD2BQ9ULI0 1458 aa42.27■■■■■ 4.36
TMEM170A-206ENST00000569276 SMARCA2P51531 1590 aa42.23■■■■■ 4.35
TMEM170A-206ENST00000569276 NCAPD3P42695 1498 aa42.23■■■■■ 4.35
TMEM170A-206ENST00000569276 PEG3Q9GZU2 1588 aa42.17■■■■■ 4.34
TMEM170A-206ENST00000569276 RSF1Q96T23 1441 aaPredicted RBP42.07■■■■■ 4.33
TMEM170A-206ENST00000569276 HMGXB3Q12766 1538 aa42■■■■■ 4.31
TMEM170A-206ENST00000569276 BAZ1BQ9UIG0 1483 aaKnown RBP41.93■■■■■ 4.3
TMEM170A-206ENST00000569276 WIZO95785 1651 aa41.82■■■■■ 4.29
TMEM170A-206ENST00000569276 TOP2AP11388 1531 aaKnown RBP41.51■■■■■ 4.24
TMEM170A-206ENST00000569276 SUPT5HO00267 1087 aaKnown RBP41.27■■■■■ 4.2
TMEM170A-206ENST00000569276 CCDC88BA6NC98 1476 aa41.03■■■■■ 4.16
TMEM170A-206ENST00000569276 CADPSQ9ULU8 1353 aa41.02■■■■■ 4.16
TMEM170A-206ENST00000569276 LAMC3Q9Y6N6 1575 aa40.97■■■■■ 4.15
TMEM170A-206ENST00000569276 NESP48681 1621 aa40.96■■■■■ 4.15
TMEM170A-206ENST00000569276 CFTRP13569 1480 aa40.84■■■■■ 4.13
TMEM170A-206ENST00000569276 PDS5BQ9NTI5 1447 aa40.76■■■■■ 4.12
TMEM170A-206ENST00000569276 ERCC6Q03468 1493 aa40.71■■■■■ 4.11
TMEM170A-206ENST00000569276 FANCD2Q9BXW9 1451 aa40.5■■■■■ 4.07
TMEM170A-206ENST00000569276 CEP164Q9UPV0 1460 aa40.4■■■■■ 4.06
TMEM170A-206ENST00000569276 KIF21AQ7Z4S6 1674 aa40.37■■■■■ 4.05
TMEM170A-206ENST00000569276 PRDM2Q13029 1718 aa40.32■■■■■ 4.05
TMEM170A-206ENST00000569276 MRC2Q9UBG0 1479 aa40.27■■■■■ 4.04
TMEM170A-206ENST00000569276 THOC2Q8NI27 1593 aaKnown RBP40.23■■■■■ 4.03
TMEM170A-206ENST00000569276 DNAJC5Q9H3Z4 198 aa40.23■■■■■ 4.03
TMEM170A-206ENST00000569276 CUX2O14529 1486 aa40.18■■■■■ 4.02
TMEM170A-206ENST00000569276 WDR62O43379 1518 aa40.1■■■■■ 4.01
TMEM170A-206ENST00000569276 URB2Q14146 1524 aaKnown RBP40.03■■■■■ 4
TMEM170A-206ENST00000569276 ABCC8Q09428 1581 aa39.97■■■■□ 3.99
TMEM170A-206ENST00000569276 TOPBP1Q92547 1522 aa39.88■■■■□ 3.97
TMEM170A-206ENST00000569276 DNMBPQ6XZF7 1577 aa39.85■■■■□ 3.97
TMEM170A-206ENST00000569276 CUX1P39880 1505 aa39.7■■■■□ 3.95
TMEM170A-206ENST00000569276 WRNQ14191 1432 aaPredicted RBP eCLIP39.66■■■■□ 3.94
TMEM170A-206ENST00000569276 POLA1P09884 1462 aaPredicted RBP39.57■■■■□ 3.93
TMEM170A-206ENST00000569276 IFT140Q96RY7 1462 aa39.57■■■■□ 3.93
TMEM170A-206ENST00000569276 FGD5Q6ZNL6 1462 aa39.52■■■■□ 3.92
TMEM170A-206ENST00000569276 TOP2BQ02880 1626 aa39.47■■■■□ 3.91
TMEM170A-206ENST00000569276 SOGA1O94964 1423 aa39.46■■■■□ 3.91
TMEM170A-206ENST00000569276 SYNJ1O43426 1573 aa39.44■■■■□ 3.9
TMEM170A-206ENST00000569276 BIVM-ERCC5R4GMW8 1640 aa39.41■■■■□ 3.9
TMEM170A-206ENST00000569276 RAD54L2Q9Y4B4 1467 aa39.37■■■■□ 3.89
TMEM170A-206ENST00000569276 TARBP1Q13395 1621 aaKnown RBP39.36■■■■□ 3.89
TMEM170A-206ENST00000569276 ZNF608Q9ULD9 1512 aaPredicted RBP39.29■■■■□ 3.88
TMEM170A-206ENST00000569276 ABCA10Q8WWZ4 1543 aa39.2■■■■□ 3.87
TMEM170A-206ENST00000569276 TDRD9Q8NDG6 1382 aaKnown RBP39.16■■■■□ 3.86
TMEM170A-206ENST00000569276 WDR97A6NE52 1622 aa39.14■■■■□ 3.86
TMEM170A-206ENST00000569276 AQRO60306 1485 aaKnown RBP eCLIP39.14■■■■□ 3.86
TMEM170A-206ENST00000569276 EIF4G3O43432 1585 aaKnown RBP39.1■■■■□ 3.85
TMEM170A-206ENST00000569276 TRIM41Q8WV44 630 aa39.03■■■■□ 3.84
TMEM170A-206ENST00000569276 GAPVD1Q14C86 1478 aa38.98■■■■□ 3.83
TMEM170A-206ENST00000569276 GRIN2BQ13224 1484 aa38.94■■■■□ 3.82
TMEM170A-206ENST00000569276 ABCA5Q8WWZ7 1642 aa38.92■■■■□ 3.82
TMEM170A-206ENST00000569276 KIF27Q86VH2 1401 aa38.83■■■■□ 3.81
TMEM170A-206ENST00000569276 MAGI1Q96QZ7 1491 aaPredicted RBP38.8■■■■□ 3.8
TMEM170A-206ENST00000569276 CHIC1Q5VXU3 224 aa38.8■■■■□ 3.8
TMEM170A-206ENST00000569276 SNAPC4Q5SXM2 1469 aa38.79■■■■□ 3.8
TMEM170A-206ENST00000569276 ERICH3Q5RHP9 1530 aa38.73■■■■□ 3.79
TMEM170A-206ENST00000569276 PBRM1Q86U86 1689 aa38.7■■■■□ 3.79
TMEM170A-206ENST00000569276 SYNJ2O15056 1496 aa38.64■■■■□ 3.78
TMEM170A-206ENST00000569276 IGF1RP08069 1367 aa38.62■■■■□ 3.77
TMEM170A-206ENST00000569276 OSCARQ8IYS5 282 aa38.62■■■■□ 3.77
TMEM170A-206ENST00000569276 FBLN2P98095 1184 aa38.61■■■■□ 3.77
TMEM170A-206ENST00000569276 CHMP7Q8WUX9 453 aaPredicted RBP38.61■■■■□ 3.77
TMEM170A-206ENST00000569276 FHAD1B1AJZ9 1412 aa38.59■■■■□ 3.77
TMEM170A-206ENST00000569276 ADAMTS12P58397 1594 aa38.53■■■■□ 3.76
TMEM170A-206ENST00000569276 RUSC2Q8N2Y8 1516 aa38.48■■■■□ 3.75
TMEM170A-206ENST00000569276 CHD1O14646 1710 aa38.43■■■■□ 3.74
TMEM170A-206ENST00000569276 GRIN2AQ12879 1464 aa38.42■■■■□ 3.74
TMEM170A-206ENST00000569276 CUL7Q14999 1698 aa38.39■■■■□ 3.74
TMEM170A-206ENST00000569276 EEA1Q15075 1411 aa38.39■■■■□ 3.74
TMEM170A-206ENST00000569276 CARMIL1Q5VZK9 1371 aa38.39■■■■□ 3.74
TMEM170A-206ENST00000569276 NUP160Q12769 1436 aa38.27■■■■□ 3.72
TMEM170A-206ENST00000569276 CSRNP3Q8WYN3 585 aa38.26■■■■□ 3.72
TMEM170A-206ENST00000569276 RAPGEF2Q9Y4G8 1499 aa38.19■■■■□ 3.7
TMEM170A-206ENST00000569276 CLASP1Q7Z460 1538 aa38.18■■■■□ 3.7
TMEM170A-206ENST00000569276 PRXQ9BXM0 1461 aa38.18■■■■□ 3.7
TMEM170A-206ENST00000569276 CEP170Q5SW79 1584 aa38.14■■■■□ 3.7
TMEM170A-206ENST00000569276 FAM9AQ8IZU1 332 aaPredicted RBP38.11■■■■□ 3.69
TMEM170A-206ENST00000569276 KIAA0586Q9BVV6 1533 aa38.01■■■■□ 3.67
TMEM170A-206ENST00000569276 JPH4Q96JJ6 628 aa37.9■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms