RNA–Protein interactions for RNA: ENST00000640343.1

REST-212, Transcript of RE1 silencing transcription factor, humanhuman

TSL 1 (best) BASIC

Gene REST, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REST-212ENST00000640343 NISCHQ9Y2I1 1504 aa54.89■■■■■ 6.38
REST-212ENST00000640343 CCDC180Q9P1Z9 1646 aa48.79■■■■■ 5.4
REST-212ENST00000640343 ABCC9O60706 1549 aa47.63■■■■■ 5.22
REST-212ENST00000640343 DCAF8L2P0C7V8 631 aa45.87■■■■■ 4.93
REST-212ENST00000640343 RB1CC1Q8TDY2 1594 aa45.83■■■■■ 4.93
REST-212ENST00000640343 ZCCHC6Q5VYS8 1495 aaKnown RBP45.78■■■■■ 4.92
REST-212ENST00000640343 NACADO15069 1562 aa45.77■■■■■ 4.92
REST-212ENST00000640343 MYO15BQ96JP2 1530 aa45.45■■■■■ 4.87
REST-212ENST00000640343 DCAF1Q9Y4B6 1507 aa45.35■■■■■ 4.85
REST-212ENST00000640343 UNC13AQ9UPW8 1703 aa44.93■■■■■ 4.78
REST-212ENST00000640343 SCRIBQ14160 1630 aa44.63■■■■■ 4.73
REST-212ENST00000640343 PABPN1Q86U42 306 aaKnown RBP eCLIP44.5■■■■■ 4.71
REST-212ENST00000640343 BICRAQ9NZM4 1560 aa44.45■■■■■ 4.71
REST-212ENST00000640343 SHROOM4Q9ULL8 1493 aa43.88■■■■■ 4.62
REST-212ENST00000640343 DNAJC5BQ9UF47 199 aa43.49■■■■■ 4.55
REST-212ENST00000640343 EIF4G1Q04637 1599 aaKnown RBP43.27■■■■■ 4.52
REST-212ENST00000640343 CC2D2AQ9P2K1 1620 aa43.09■■■■■ 4.49
REST-212ENST00000640343 CECR2Q9BXF3 1484 aa42.79■■■■■ 4.44
REST-212ENST00000640343 SMARCA4P51532 1647 aa42.63■■■■■ 4.42
REST-212ENST00000640343 BAZ1AQ9NRL2 1556 aaPredicted RBP42.55■■■■■ 4.4
REST-212ENST00000640343 MROH2BQ7Z745 1585 aa42.35■■■■■ 4.37
REST-212ENST00000640343 ATAD2BQ9ULI0 1458 aa42.29■■■■■ 4.36
REST-212ENST00000640343 SMARCA2P51531 1590 aa42.26■■■■■ 4.36
REST-212ENST00000640343 NCAPD3P42695 1498 aa42.18■■■■■ 4.34
REST-212ENST00000640343 PEG3Q9GZU2 1588 aa42.12■■■■■ 4.33
REST-212ENST00000640343 HMGXB3Q12766 1538 aa42.07■■■■■ 4.32
REST-212ENST00000640343 BAZ1BQ9UIG0 1483 aaKnown RBP41.99■■■■■ 4.31
REST-212ENST00000640343 WIZO95785 1651 aa41.98■■■■■ 4.31
REST-212ENST00000640343 RSF1Q96T23 1441 aaPredicted RBP41.86■■■■■ 4.29
REST-212ENST00000640343 TOP2AP11388 1531 aaKnown RBP41.47■■■■■ 4.23
REST-212ENST00000640343 NESP48681 1621 aa41.27■■■■■ 4.2
REST-212ENST00000640343 LAMC3Q9Y6N6 1575 aa41.12■■■■■ 4.17
REST-212ENST00000640343 SUPT5HO00267 1087 aaKnown RBP41.09■■■■■ 4.17
REST-212ENST00000640343 ERCC6Q03468 1493 aa41.04■■■■■ 4.16
REST-212ENST00000640343 CADPSQ9ULU8 1353 aa40.98■■■■■ 4.15
REST-212ENST00000640343 CCDC88BA6NC98 1476 aa40.95■■■■■ 4.15
REST-212ENST00000640343 KIF21AQ7Z4S6 1674 aa40.85■■■■■ 4.13
REST-212ENST00000640343 PDS5BQ9NTI5 1447 aa40.79■■■■■ 4.12
REST-212ENST00000640343 CFTRP13569 1480 aa40.78■■■■■ 4.12
REST-212ENST00000640343 PRDM2Q13029 1718 aa40.65■■■■■ 4.1
REST-212ENST00000640343 THOC2Q8NI27 1593 aaKnown RBP40.62■■■■■ 4.09
REST-212ENST00000640343 FANCD2Q9BXW9 1451 aa40.58■■■■■ 4.09
REST-212ENST00000640343 CEP164Q9UPV0 1460 aa40.53■■■■■ 4.08
REST-212ENST00000640343 CUX2O14529 1486 aa40.46■■■■■ 4.07
REST-212ENST00000640343 MRC2Q9UBG0 1479 aa40.42■■■■■ 4.06
REST-212ENST00000640343 WDR62O43379 1518 aa40.29■■■■■ 4.04
REST-212ENST00000640343 URB2Q14146 1524 aaKnown RBP40.18■■■■■ 4.02
REST-212ENST00000640343 TOPBP1Q92547 1522 aa39.96■■■■□ 3.99
REST-212ENST00000640343 DNMBPQ6XZF7 1577 aa39.93■■■■□ 3.98
REST-212ENST00000640343 ABCC8Q09428 1581 aa39.87■■■■□ 3.97
REST-212ENST00000640343 CUX1P39880 1505 aa39.73■■■■□ 3.95
REST-212ENST00000640343 POLA1P09884 1462 aaPredicted RBP39.63■■■■□ 3.93
REST-212ENST00000640343 IFT140Q96RY7 1462 aa39.63■■■■□ 3.93
REST-212ENST00000640343 FGD5Q6ZNL6 1462 aa39.57■■■■□ 3.93
REST-212ENST00000640343 TARBP1Q13395 1621 aaKnown RBP39.53■■■■□ 3.92
REST-212ENST00000640343 ZNF608Q9ULD9 1512 aaPredicted RBP39.5■■■■□ 3.91
REST-212ENST00000640343 WRNQ14191 1432 aaPredicted RBP eCLIP39.49■■■■□ 3.91
REST-212ENST00000640343 SYNJ1O43426 1573 aa39.48■■■■□ 3.91
REST-212ENST00000640343 RAD54L2Q9Y4B4 1467 aa39.48■■■■□ 3.91
REST-212ENST00000640343 BIVM-ERCC5R4GMW8 1640 aa39.44■■■■□ 3.9
REST-212ENST00000640343 TOP2BQ02880 1626 aa39.43■■■■□ 3.9
REST-212ENST00000640343 SOGA1O94964 1423 aa39.43■■■■□ 3.9
REST-212ENST00000640343 EIF4G3O43432 1585 aaKnown RBP39.4■■■■□ 3.9
REST-212ENST00000640343 WDR97A6NE52 1622 aa39.3■■■■□ 3.88
REST-212ENST00000640343 AQRO60306 1485 aaKnown RBP eCLIP39.28■■■■□ 3.88
REST-212ENST00000640343 TDRD9Q8NDG6 1382 aaKnown RBP39.22■■■■□ 3.87
REST-212ENST00000640343 ABCA10Q8WWZ4 1543 aa39.14■■■■□ 3.86
REST-212ENST00000640343 ABCA5Q8WWZ7 1642 aa39.05■■■■□ 3.84
REST-212ENST00000640343 PBRM1Q86U86 1689 aa39.04■■■■□ 3.84
REST-212ENST00000640343 GAPVD1Q14C86 1478 aa39■■■■□ 3.83
REST-212ENST00000640343 DNAJC5Q9H3Z4 198 aa38.99■■■■□ 3.83
REST-212ENST00000640343 GRIN2BQ13224 1484 aa38.95■■■■□ 3.83
REST-212ENST00000640343 SNAPC4Q5SXM2 1469 aa38.95■■■■□ 3.83
REST-212ENST00000640343 CHD1O14646 1710 aa38.92■■■■□ 3.82
REST-212ENST00000640343 MAGI1Q96QZ7 1491 aaPredicted RBP38.83■■■■□ 3.81
REST-212ENST00000640343 FBLN2P98095 1184 aa38.8■■■■□ 3.8
REST-212ENST00000640343 OSCARQ8IYS5 282 aa38.78■■■■□ 3.8
REST-212ENST00000640343 TRIM41Q8WV44 630 aa38.77■■■■□ 3.8
REST-212ENST00000640343 SYNJ2O15056 1496 aa38.69■■■■□ 3.78
REST-212ENST00000640343 ERICH3Q5RHP9 1530 aa38.69■■■■□ 3.78
REST-212ENST00000640343 ADAMTS12P58397 1594 aa38.68■■■■□ 3.78
REST-212ENST00000640343 CHMP7Q8WUX9 453 aaPredicted RBP38.65■■■■□ 3.78
REST-212ENST00000640343 KIF27Q86VH2 1401 aa38.64■■■■□ 3.78
REST-212ENST00000640343 CHIC1Q5VXU3 224 aa38.58■■■■□ 3.77
REST-212ENST00000640343 FHAD1B1AJZ9 1412 aa38.52■■■■□ 3.76
REST-212ENST00000640343 GRIN2AQ12879 1464 aa38.48■■■■□ 3.75
REST-212ENST00000640343 CUL7Q14999 1698 aa38.43■■■■□ 3.74
REST-212ENST00000640343 IGF1RP08069 1367 aa38.42■■■■□ 3.74
REST-212ENST00000640343 RUSC2Q8N2Y8 1516 aa38.41■■■■□ 3.74
REST-212ENST00000640343 CLASP1Q7Z460 1538 aa38.4■■■■□ 3.74
REST-212ENST00000640343 CEP170Q5SW79 1584 aa38.34■■■■□ 3.73
REST-212ENST00000640343 RIMBP3CA6NJZ7 1639 aa38.29■■■■□ 3.72
REST-212ENST00000640343 RIMBP3BA6NNM3 1639 aa38.29■■■■□ 3.72
REST-212ENST00000640343 RIMBP3Q9UFD9 1639 aa38.29■■■■□ 3.72
REST-212ENST00000640343 NUP160Q12769 1436 aa38.26■■■■□ 3.72
REST-212ENST00000640343 ARHGEF11O15085 1522 aa38.26■■■■□ 3.72
REST-212ENST00000640343 CARMIL1Q5VZK9 1371 aa38.23■■■■□ 3.71
REST-212ENST00000640343 RAPGEF2Q9Y4G8 1499 aa38.04■■■■□ 3.68
REST-212ENST00000640343 SHROOM2Q13796 1616 aa38.01■■■■□ 3.68
REST-212ENST00000640343 EEA1Q15075 1411 aa37.97■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms