Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
RC3H1Q5TC82 AC091305.1-201ENST00000479476 895 ntBASIC29.76■■■□□ 2.35
RC3H1Q5TC82 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.76■■■□□ 2.35
RC3H1Q5TC82 AC005703.6-201ENST00000623265 1329 ntBASIC29.75■■■□□ 2.35
RC3H1Q5TC82 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RC3H1Q5TC82 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
RC3H1Q5TC82 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC29.75■■■□□ 2.35
RC3H1Q5TC82 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RC3H1Q5TC82 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
RC3H1Q5TC82 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RC3H1Q5TC82 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC29.74■■■□□ 2.35
RC3H1Q5TC82 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
RC3H1Q5TC82 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RC3H1Q5TC82 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
RC3H1Q5TC82 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RC3H1Q5TC82 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RC3H1Q5TC82 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC29.73■■■□□ 2.35
RC3H1Q5TC82 AC096887.2-201ENST00000623443 1957 ntBASIC29.73■■■□□ 2.35
RC3H1Q5TC82 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.73■■■□□ 2.35
RC3H1Q5TC82 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC29.72■■■□□ 2.35
RC3H1Q5TC82 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
RC3H1Q5TC82 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
RC3H1Q5TC82 AC097381.1-201ENST00000429019 1296 ntBASIC29.72■■■□□ 2.35
RC3H1Q5TC82 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC29.72■■■□□ 2.35
RC3H1Q5TC82 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC29.71■■■□□ 2.35
RC3H1Q5TC82 AC092171.4-201ENST00000609130 632 ntBASIC29.71■■■□□ 2.35
RC3H1Q5TC82 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
RC3H1Q5TC82 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
RC3H1Q5TC82 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC29.7■■■□□ 2.35
RC3H1Q5TC82 SYT6-210ENST00000641643 1587 ntBASIC29.7■■■□□ 2.35
RC3H1Q5TC82 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.7■■■□□ 2.35
RC3H1Q5TC82 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC29.7■■■□□ 2.35
RC3H1Q5TC82 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RC3H1Q5TC82 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RC3H1Q5TC82 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
RC3H1Q5TC82 STOX2-205ENST00000513034 807 ntTSL 3 BASIC29.69■■■□□ 2.34
RC3H1Q5TC82 ANKRD20A6P-201ENST00000618763 204 ntBASIC29.69■■■□□ 2.34
RC3H1Q5TC82 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC29.69■■■□□ 2.34
RC3H1Q5TC82 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC29.68■■■□□ 2.34
RC3H1Q5TC82 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
RC3H1Q5TC82 MIR4767-201ENST00000582827 78 ntBASIC29.68■■■□□ 2.34
RC3H1Q5TC82 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29.68■■■□□ 2.34
RC3H1Q5TC82 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RC3H1Q5TC82 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RC3H1Q5TC82 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RC3H1Q5TC82 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
RC3H1Q5TC82 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
RC3H1Q5TC82 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RC3H1Q5TC82 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
RC3H1Q5TC82 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RC3H1Q5TC82 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC29.67■■■□□ 2.34
RC3H1Q5TC82 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
RC3H1Q5TC82 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RC3H1Q5TC82 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
RC3H1Q5TC82 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC29.66■■■□□ 2.34
RC3H1Q5TC82 RASA4CP-201ENST00000424092 1398 ntBASIC29.66■■■□□ 2.34
RC3H1Q5TC82 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
RC3H1Q5TC82 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC29.66■■■□□ 2.34
RC3H1Q5TC82 PARL-206ENST00000435888 1098 ntTSL 5 BASIC29.66■■■□□ 2.34
RC3H1Q5TC82 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC29.66■■■□□ 2.34
RC3H1Q5TC82 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
RC3H1Q5TC82 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RC3H1Q5TC82 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC29.65■■■□□ 2.34
RC3H1Q5TC82 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RC3H1Q5TC82 CA15P2-201ENST00000611168 834 ntBASIC29.65■■■□□ 2.34
RC3H1Q5TC82 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
RC3H1Q5TC82 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
RC3H1Q5TC82 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
RC3H1Q5TC82 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.65■■■□□ 2.34
RC3H1Q5TC82 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
RC3H1Q5TC82 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RC3H1Q5TC82 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
RC3H1Q5TC82 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
RC3H1Q5TC82 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
RC3H1Q5TC82 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
RC3H1Q5TC82 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
RC3H1Q5TC82 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.64■■■□□ 2.34
RC3H1Q5TC82 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
RC3H1Q5TC82 PTMA-205ENST00000410064 814 ntTSL 2 BASIC29.64■■■□□ 2.34
RC3H1Q5TC82 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC29.64■■■□□ 2.34
RC3H1Q5TC82 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.63■■■□□ 2.33
RC3H1Q5TC82 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RC3H1Q5TC82 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
RC3H1Q5TC82 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RC3H1Q5TC82 SERBP1P1-201ENST00000396021 1160 ntBASIC29.63■■■□□ 2.33
RC3H1Q5TC82 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RC3H1Q5TC82 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC29.63■■■□□ 2.33
RC3H1Q5TC82 MAG-206ENST00000597035 542 ntTSL 4 BASIC29.63■■■□□ 2.33
RC3H1Q5TC82 AC087623.3-201ENST00000607047 1098 ntBASIC29.62■■■□□ 2.33
RC3H1Q5TC82 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RC3H1Q5TC82 REST-206ENST00000612429 1376 ntTSL 5 BASIC29.62■■■□□ 2.33
RC3H1Q5TC82 REST-207ENST00000616975 1370 ntTSL 5 BASIC29.62■■■□□ 2.33
RC3H1Q5TC82 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RC3H1Q5TC82 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC29.61■■■□□ 2.33
RC3H1Q5TC82 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RC3H1Q5TC82 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC29.61■■■□□ 2.33
RC3H1Q5TC82 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RC3H1Q5TC82 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RC3H1Q5TC82 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC29.6■■■□□ 2.33
RC3H1Q5TC82 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 196.4 ms