RNA–Protein interactions for RNA: ENST00000398846.5

SAC3D1-201, Transcript of SAC3 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAC3D1, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAC3D1-201ENST00000398846 NISCHQ9Y2I1 1504 aa54.87■■■■■ 6.37
SAC3D1-201ENST00000398846 CCDC180Q9P1Z9 1646 aa48.12■■■■■ 5.29
SAC3D1-201ENST00000398846 ZCCHC6Q5VYS8 1495 aaKnown RBP46.04■■■■■ 4.96
SAC3D1-201ENST00000398846 ABCC9O60706 1549 aa45.81■■■■■ 4.92
SAC3D1-201ENST00000398846 DCAF1Q9Y4B6 1507 aa45.39■■■■■ 4.86
SAC3D1-201ENST00000398846 DCAF8L2P0C7V8 631 aa45.3■■■■■ 4.84
SAC3D1-201ENST00000398846 MYO15BQ96JP2 1530 aa45.01■■■■■ 4.8
SAC3D1-201ENST00000398846 NACADO15069 1562 aa44.86■■■■■ 4.77
SAC3D1-201ENST00000398846 RB1CC1Q8TDY2 1594 aa44.59■■■■■ 4.73
SAC3D1-201ENST00000398846 SHROOM4Q9ULL8 1493 aa44.41■■■■■ 4.7
SAC3D1-201ENST00000398846 SCRIBQ14160 1630 aa44.17■■■■■ 4.66
SAC3D1-201ENST00000398846 UNC13AQ9UPW8 1703 aa43.72■■■■■ 4.59
SAC3D1-201ENST00000398846 BICRAQ9NZM4 1560 aa43.27■■■■■ 4.52
SAC3D1-201ENST00000398846 PABPN1Q86U42 306 aaKnown RBP eCLIP43.04■■■■■ 4.48
SAC3D1-201ENST00000398846 CECR2Q9BXF3 1484 aa42.66■■■■■ 4.42
SAC3D1-201ENST00000398846 SUPT5HO00267 1087 aaKnown RBP42.45■■■■■ 4.39
SAC3D1-201ENST00000398846 BAZ1AQ9NRL2 1556 aaPredicted RBP42.42■■■■■ 4.38
SAC3D1-201ENST00000398846 MROH2BQ7Z745 1585 aa42.38■■■■■ 4.37
SAC3D1-201ENST00000398846 RSF1Q96T23 1441 aaPredicted RBP42.38■■■■■ 4.37
SAC3D1-201ENST00000398846 SMARCA4P51532 1647 aa42.31■■■■■ 4.36
SAC3D1-201ENST00000398846 WIZO95785 1651 aa42.03■■■■■ 4.32
SAC3D1-201ENST00000398846 EIF4G1Q04637 1599 aaKnown RBP41.99■■■■■ 4.31
SAC3D1-201ENST00000398846 PEG3Q9GZU2 1588 aa41.8■■■■■ 4.28
SAC3D1-201ENST00000398846 ATAD2BQ9ULI0 1458 aa41.68■■■■■ 4.26
SAC3D1-201ENST00000398846 SMARCA2P51531 1590 aa41.66■■■■■ 4.26
SAC3D1-201ENST00000398846 TOP2AP11388 1531 aaKnown RBP41.6■■■■■ 4.25
SAC3D1-201ENST00000398846 CC2D2AQ9P2K1 1620 aa41.48■■■■■ 4.23
SAC3D1-201ENST00000398846 BAZ1BQ9UIG0 1483 aaKnown RBP41.43■■■■■ 4.22
SAC3D1-201ENST00000398846 NCAPD3P42695 1498 aa41.37■■■■■ 4.21
SAC3D1-201ENST00000398846 HMGXB3Q12766 1538 aa41.35■■■■■ 4.21
SAC3D1-201ENST00000398846 DNAJC5BQ9UF47 199 aa41.13■■■■■ 4.18
SAC3D1-201ENST00000398846 CCDC88BA6NC98 1476 aa41.11■■■■■ 4.17
SAC3D1-201ENST00000398846 CHIC1Q5VXU3 224 aa40.43■■■■■ 4.06
SAC3D1-201ENST00000398846 CFTRP13569 1480 aa40.35■■■■■ 4.05
SAC3D1-201ENST00000398846 CADPSQ9ULU8 1353 aa40.26■■■■■ 4.04
SAC3D1-201ENST00000398846 PRDM2Q13029 1718 aa40.21■■■■■ 4.03
SAC3D1-201ENST00000398846 ABCC8Q09428 1581 aa40.15■■■■■ 4.02
SAC3D1-201ENST00000398846 NESP48681 1621 aa40.09■■■■■ 4.01
SAC3D1-201ENST00000398846 LAMC3Q9Y6N6 1575 aa40.08■■■■■ 4.01
SAC3D1-201ENST00000398846 TRIM41Q8WV44 630 aa39.95■■■■□ 3.99
SAC3D1-201ENST00000398846 WRNQ14191 1432 aaPredicted RBP eCLIP39.9■■■■□ 3.98
SAC3D1-201ENST00000398846 FANCD2Q9BXW9 1451 aa39.86■■■■□ 3.97
SAC3D1-201ENST00000398846 SYNJ1O43426 1573 aa39.82■■■■□ 3.96
SAC3D1-201ENST00000398846 PDS5BQ9NTI5 1447 aa39.73■■■■□ 3.95
SAC3D1-201ENST00000398846 CUX1P39880 1505 aa39.67■■■■□ 3.94
SAC3D1-201ENST00000398846 TOP2BQ02880 1626 aa39.67■■■■□ 3.94
SAC3D1-201ENST00000398846 BIVM-ERCC5R4GMW8 1640 aa39.67■■■■□ 3.94
SAC3D1-201ENST00000398846 CEP164Q9UPV0 1460 aa39.67■■■■□ 3.94
SAC3D1-201ENST00000398846 KIF21AQ7Z4S6 1674 aa39.66■■■■□ 3.94
SAC3D1-201ENST00000398846 DNMBPQ6XZF7 1577 aa39.46■■■■□ 3.91
SAC3D1-201ENST00000398846 URB2Q14146 1524 aaKnown RBP39.4■■■■□ 3.9
SAC3D1-201ENST00000398846 TOPBP1Q92547 1522 aa39.39■■■■□ 3.9
SAC3D1-201ENST00000398846 ERCC6Q03468 1493 aa39.31■■■■□ 3.88
SAC3D1-201ENST00000398846 MRC2Q9UBG0 1479 aa39.3■■■■□ 3.88
SAC3D1-201ENST00000398846 FGD5Q6ZNL6 1462 aa39.29■■■■□ 3.88
SAC3D1-201ENST00000398846 SOGA1O94964 1423 aa39.26■■■■□ 3.88
SAC3D1-201ENST00000398846 FAM9AQ8IZU1 332 aaPredicted RBP39.21■■■■□ 3.87
SAC3D1-201ENST00000398846 POLA1P09884 1462 aaPredicted RBP39.17■■■■□ 3.86
SAC3D1-201ENST00000398846 RUSC2Q8N2Y8 1516 aa39.14■■■■□ 3.86
SAC3D1-201ENST00000398846 THOC2Q8NI27 1593 aaKnown RBP39.14■■■■□ 3.86
SAC3D1-201ENST00000398846 WDR62O43379 1518 aa39.13■■■■□ 3.85
SAC3D1-201ENST00000398846 EEA1Q15075 1411 aa39.11■■■■□ 3.85
SAC3D1-201ENST00000398846 RAD54L2Q9Y4B4 1467 aa39.01■■■■□ 3.84
SAC3D1-201ENST00000398846 CUX2O14529 1486 aa38.94■■■■□ 3.82
SAC3D1-201ENST00000398846 ABCA10Q8WWZ4 1543 aa38.93■■■■□ 3.82
SAC3D1-201ENST00000398846 KIF27Q86VH2 1401 aa38.92■■■■□ 3.82
SAC3D1-201ENST00000398846 WDR97A6NE52 1622 aa38.92■■■■□ 3.82
SAC3D1-201ENST00000398846 TARBP1Q13395 1621 aaKnown RBP38.87■■■■□ 3.81
SAC3D1-201ENST00000398846 CSRNP3Q8WYN3 585 aa38.86■■■■□ 3.81
SAC3D1-201ENST00000398846 LOC105371045A0A1W2PR82 267 aa38.83■■■■□ 3.81
SAC3D1-201ENST00000398846 IFT140Q96RY7 1462 aa38.72■■■■□ 3.79
SAC3D1-201ENST00000398846 ABCA5Q8WWZ7 1642 aa38.7■■■■□ 3.79
SAC3D1-201ENST00000398846 KIF21BO75037 1637 aa38.68■■■■□ 3.78
SAC3D1-201ENST00000398846 EHMT2Q96KQ7 1210 aa38.67■■■■□ 3.78
SAC3D1-201ENST00000398846 TDRD9Q8NDG6 1382 aaKnown RBP38.64■■■■□ 3.78
SAC3D1-201ENST00000398846 IGF1RP08069 1367 aa38.59■■■■□ 3.77
SAC3D1-201ENST00000398846 GAPVD1Q14C86 1478 aa38.58■■■■□ 3.77
SAC3D1-201ENST00000398846 PRXQ9BXM0 1461 aa38.57■■■■□ 3.77
SAC3D1-201ENST00000398846 GOLGA3Q08378 1498 aa38.56■■■■□ 3.76
SAC3D1-201ENST00000398846 ZNF608Q9ULD9 1512 aaPredicted RBP38.54■■■■□ 3.76
SAC3D1-201ENST00000398846 RAPGEF2Q9Y4G8 1499 aa38.5■■■■□ 3.75
SAC3D1-201ENST00000398846 ERICH3Q5RHP9 1530 aa38.48■■■■□ 3.75
SAC3D1-201ENST00000398846 PBRM1Q86U86 1689 aa38.48■■■■□ 3.75
SAC3D1-201ENST00000398846 AQRO60306 1485 aaKnown RBP eCLIP38.47■■■■□ 3.756e-8■■□□□ 12.9
SAC3D1-201ENST00000398846 EIF4G3O43432 1585 aaKnown RBP38.45■■■■□ 3.75
SAC3D1-201ENST00000398846 CUL7Q14999 1698 aa38.44■■■■□ 3.74
SAC3D1-201ENST00000398846 CARMIL1Q5VZK9 1371 aa38.4■■■■□ 3.74
SAC3D1-201ENST00000398846 GRIN2BQ13224 1484 aa38.35■■■■□ 3.73
SAC3D1-201ENST00000398846 UBTFP17480 764 aaKnown RBP38.31■■■■□ 3.72
SAC3D1-201ENST00000398846 TNIKQ9UKE5 1360 aa38.31■■■■□ 3.72
SAC3D1-201ENST00000398846 ADAMTS12P58397 1594 aa38.24■■■■□ 3.71
SAC3D1-201ENST00000398846 SNAPC4Q5SXM2 1469 aa38.17■■■■□ 3.7
SAC3D1-201ENST00000398846 FHAD1B1AJZ9 1412 aa38.15■■■■□ 3.7
SAC3D1-201ENST00000398846 CEP162Q5TB80 1403 aa38.12■■■■□ 3.69
SAC3D1-201ENST00000398846 MAGI1Q96QZ7 1491 aaPredicted RBP38.09■■■■□ 3.69
SAC3D1-201ENST00000398846 CTTNBP2Q8WZ74 1663 aa37.97■■■■□ 3.67
SAC3D1-201ENST00000398846 SYNJ2O15056 1496 aa37.93■■■■□ 3.66
SAC3D1-201ENST00000398846 CLIP1P30622 1438 aa37.91■■■■□ 3.66
SAC3D1-201ENST00000398846 GRIN2AQ12879 1464 aa37.89■■■■□ 3.66
SAC3D1-201ENST00000398846 RANGAP1P46060 587 aaPredicted RBP37.83■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms