Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.55■□□□□ 0.88
FREM1Q5H8C1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FREM1Q5H8C1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
FREM1Q5H8C1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.55■□□□□ 0.88
FREM1Q5H8C1 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.55■□□□□ 0.88
FREM1Q5H8C1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FREM1Q5H8C1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.54■□□□□ 0.88
FREM1Q5H8C1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
FREM1Q5H8C1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FREM1Q5H8C1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FREM1Q5H8C1 KRT16P3-201ENST00000439127 1283 ntBASIC20.53■□□□□ 0.88
FREM1Q5H8C1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FREM1Q5H8C1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FREM1Q5H8C1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FREM1Q5H8C1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FREM1Q5H8C1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.53■□□□□ 0.88
FREM1Q5H8C1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
FREM1Q5H8C1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.53■□□□□ 0.88
FREM1Q5H8C1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
FREM1Q5H8C1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.53■□□□□ 0.88
FREM1Q5H8C1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FREM1Q5H8C1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
FREM1Q5H8C1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FREM1Q5H8C1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.52■□□□□ 0.88
FREM1Q5H8C1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FREM1Q5H8C1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FREM1Q5H8C1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FREM1Q5H8C1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
FREM1Q5H8C1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
FREM1Q5H8C1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.52■□□□□ 0.88
FREM1Q5H8C1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FREM1Q5H8C1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.51■□□□□ 0.87
FREM1Q5H8C1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FREM1Q5H8C1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FREM1Q5H8C1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FREM1Q5H8C1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.51■□□□□ 0.87
FREM1Q5H8C1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FREM1Q5H8C1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.5■□□□□ 0.87
FREM1Q5H8C1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FREM1Q5H8C1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
FREM1Q5H8C1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.5■□□□□ 0.87
FREM1Q5H8C1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.5■□□□□ 0.87
FREM1Q5H8C1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
FREM1Q5H8C1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
FREM1Q5H8C1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.5■□□□□ 0.87
FREM1Q5H8C1 AC138932.3-201ENST00000567634 1902 ntBASIC20.5■□□□□ 0.87
FREM1Q5H8C1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.5■□□□□ 0.87
FREM1Q5H8C1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FREM1Q5H8C1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
FREM1Q5H8C1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FREM1Q5H8C1 MIR6089-201ENST00000616698 64 ntBASIC20.49■□□□□ 0.87
FREM1Q5H8C1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.49■□□□□ 0.87
FREM1Q5H8C1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FREM1Q5H8C1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FREM1Q5H8C1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FREM1Q5H8C1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FREM1Q5H8C1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FREM1Q5H8C1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
FREM1Q5H8C1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FREM1Q5H8C1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FREM1Q5H8C1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
FREM1Q5H8C1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FREM1Q5H8C1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
FREM1Q5H8C1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FREM1Q5H8C1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FREM1Q5H8C1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.48■□□□□ 0.87
FREM1Q5H8C1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FREM1Q5H8C1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.48■□□□□ 0.87
FREM1Q5H8C1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
FREM1Q5H8C1 AL356441.2-201ENST00000443009 864 ntBASIC20.48■□□□□ 0.87
FREM1Q5H8C1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FREM1Q5H8C1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
FREM1Q5H8C1 AC135731.1-201ENST00000569415 2548 ntBASIC20.47■□□□□ 0.87
FREM1Q5H8C1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
FREM1Q5H8C1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
FREM1Q5H8C1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.47■□□□□ 0.87
FREM1Q5H8C1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
FREM1Q5H8C1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
FREM1Q5H8C1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FREM1Q5H8C1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
FREM1Q5H8C1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FREM1Q5H8C1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FREM1Q5H8C1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FREM1Q5H8C1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.46■□□□□ 0.87
FREM1Q5H8C1 AC131281.2-201ENST00000520478 145 ntBASIC20.46■□□□□ 0.87
FREM1Q5H8C1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
FREM1Q5H8C1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.46■□□□□ 0.87
FREM1Q5H8C1 AC131274.2-201ENST00000580697 1507 ntBASIC20.46■□□□□ 0.87
FREM1Q5H8C1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FREM1Q5H8C1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
FREM1Q5H8C1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FREM1Q5H8C1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.45■□□□□ 0.86
FREM1Q5H8C1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FREM1Q5H8C1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.45■□□□□ 0.86
FREM1Q5H8C1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FREM1Q5H8C1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
FREM1Q5H8C1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.45■□□□□ 0.86
FREM1Q5H8C1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.45■□□□□ 0.86
FREM1Q5H8C1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FREM1Q5H8C1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms