Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NSUN3Q9H649 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NSUN3Q9H649 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.94■■□□□ 1.58
NSUN3Q9H649 AL136967.2-201ENST00000623968 743 ntBASIC24.94■■□□□ 1.58
NSUN3Q9H649 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
NSUN3Q9H649 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
NSUN3Q9H649 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NSUN3Q9H649 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.93■■□□□ 1.58
NSUN3Q9H649 AF213884.3-201ENST00000563833 479 ntBASIC24.93■■□□□ 1.58
NSUN3Q9H649 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
NSUN3Q9H649 AP004609.3-201ENST00000610705 1884 ntBASIC24.93■■□□□ 1.58
NSUN3Q9H649 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
NSUN3Q9H649 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
NSUN3Q9H649 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
NSUN3Q9H649 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
NSUN3Q9H649 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.92■■□□□ 1.58
NSUN3Q9H649 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.92■■□□□ 1.58
NSUN3Q9H649 MIR6821-201ENST00000617625 74 ntBASIC24.92■■□□□ 1.58
NSUN3Q9H649 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
NSUN3Q9H649 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
NSUN3Q9H649 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.91■■□□□ 1.58
NSUN3Q9H649 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
NSUN3Q9H649 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
NSUN3Q9H649 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NSUN3Q9H649 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NSUN3Q9H649 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NSUN3Q9H649 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.9■■□□□ 1.58
NSUN3Q9H649 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
NSUN3Q9H649 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
NSUN3Q9H649 MIR939-201ENST00000401314 82 ntBASIC24.89■■□□□ 1.58
NSUN3Q9H649 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.89■■□□□ 1.58
NSUN3Q9H649 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.89■■□□□ 1.58
NSUN3Q9H649 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
NSUN3Q9H649 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
NSUN3Q9H649 FOXO3B-201ENST00000395675 1928 ntBASIC24.88■■□□□ 1.57
NSUN3Q9H649 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.88■■□□□ 1.57
NSUN3Q9H649 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.88■■□□□ 1.57
NSUN3Q9H649 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.88■■□□□ 1.57
NSUN3Q9H649 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
NSUN3Q9H649 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NSUN3Q9H649 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
NSUN3Q9H649 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
NSUN3Q9H649 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.87■■□□□ 1.57
NSUN3Q9H649 AC097381.1-201ENST00000429019 1296 ntBASIC24.87■■□□□ 1.57
NSUN3Q9H649 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NSUN3Q9H649 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.87■■□□□ 1.57
NSUN3Q9H649 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
NSUN3Q9H649 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
NSUN3Q9H649 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NSUN3Q9H649 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NSUN3Q9H649 AP001330.3-201ENST00000520123 633 ntBASIC24.86■■□□□ 1.57
NSUN3Q9H649 DUX4L19-201ENST00000557448 1267 ntBASIC24.86■■□□□ 1.57
NSUN3Q9H649 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.86■■□□□ 1.57
NSUN3Q9H649 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NSUN3Q9H649 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NSUN3Q9H649 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
NSUN3Q9H649 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
NSUN3Q9H649 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.85■■□□□ 1.57
NSUN3Q9H649 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
NSUN3Q9H649 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NSUN3Q9H649 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NSUN3Q9H649 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.84■■□□□ 1.57
NSUN3Q9H649 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NSUN3Q9H649 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
NSUN3Q9H649 AC091305.1-201ENST00000479476 895 ntBASIC24.84■■□□□ 1.57
NSUN3Q9H649 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NSUN3Q9H649 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.83■■□□□ 1.57
NSUN3Q9H649 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
NSUN3Q9H649 AC004448.1-201ENST00000458332 883 ntBASIC24.83■■□□□ 1.57
NSUN3Q9H649 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
NSUN3Q9H649 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.83■■□□□ 1.57
NSUN3Q9H649 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.83■■□□□ 1.57
NSUN3Q9H649 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.83■■□□□ 1.57
NSUN3Q9H649 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
NSUN3Q9H649 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
NSUN3Q9H649 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
NSUN3Q9H649 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NSUN3Q9H649 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NSUN3Q9H649 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NSUN3Q9H649 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NSUN3Q9H649 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.82■■□□□ 1.56
NSUN3Q9H649 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.82■■□□□ 1.56
NSUN3Q9H649 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
NSUN3Q9H649 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.81■■□□□ 1.56
NSUN3Q9H649 AC090877.2-201ENST00000558441 1738 ntBASIC24.81■■□□□ 1.56
NSUN3Q9H649 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.81■■□□□ 1.56
NSUN3Q9H649 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
NSUN3Q9H649 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NSUN3Q9H649 AL162430.1-201ENST00000480705 870 ntBASIC24.81■■□□□ 1.56
NSUN3Q9H649 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NSUN3Q9H649 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.8■■□□□ 1.56
NSUN3Q9H649 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.8■■□□□ 1.56
NSUN3Q9H649 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.8■■□□□ 1.56
NSUN3Q9H649 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.8■■□□□ 1.56
NSUN3Q9H649 AC087623.3-201ENST00000607047 1098 ntBASIC24.8■■□□□ 1.56
NSUN3Q9H649 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.8■■□□□ 1.56
NSUN3Q9H649 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NSUN3Q9H649 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.79■■□□□ 1.56
NSUN3Q9H649 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
NSUN3Q9H649 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms