Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AL136967.2-201ENST00000623968 743 ntBASIC33.06■■■□□ 2.88
XRN1Q8IZH2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
XRN1Q8IZH2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
XRN1Q8IZH2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
XRN1Q8IZH2 MIR6821-201ENST00000617625 74 ntBASIC33.05■■■□□ 2.88
XRN1Q8IZH2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC33.05■■■□□ 2.88
XRN1Q8IZH2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
XRN1Q8IZH2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC33.05■■■□□ 2.88
XRN1Q8IZH2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
XRN1Q8IZH2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC33.05■■■□□ 2.88
XRN1Q8IZH2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC33.04■■■□□ 2.88
XRN1Q8IZH2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
XRN1Q8IZH2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
XRN1Q8IZH2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC33.04■■■□□ 2.88
XRN1Q8IZH2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC33.04■■■□□ 2.88
XRN1Q8IZH2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
XRN1Q8IZH2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
XRN1Q8IZH2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC33.03■■■□□ 2.88
XRN1Q8IZH2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC33.03■■■□□ 2.88
XRN1Q8IZH2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC33.03■■■□□ 2.88
XRN1Q8IZH2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
XRN1Q8IZH2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC33.03■■■□□ 2.88
XRN1Q8IZH2 LBH-205ENST00000407930 756 ntTSL 2 BASIC33.02■■■□□ 2.88
XRN1Q8IZH2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC33.02■■■□□ 2.88
XRN1Q8IZH2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
XRN1Q8IZH2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
XRN1Q8IZH2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC33.01■■■□□ 2.88
XRN1Q8IZH2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
XRN1Q8IZH2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC33.01■■■□□ 2.87
XRN1Q8IZH2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC33.01■■■□□ 2.87
XRN1Q8IZH2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
XRN1Q8IZH2 AC097381.1-201ENST00000429019 1296 ntBASIC33■■■□□ 2.87
XRN1Q8IZH2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC33■■■□□ 2.87
XRN1Q8IZH2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC32.99■■■□□ 2.87
XRN1Q8IZH2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
XRN1Q8IZH2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC32.99■■■□□ 2.87
XRN1Q8IZH2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC32.99■■■□□ 2.87
XRN1Q8IZH2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC32.99■■■□□ 2.87
XRN1Q8IZH2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
XRN1Q8IZH2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC32.98■■■□□ 2.87
XRN1Q8IZH2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC32.98■■■□□ 2.87
XRN1Q8IZH2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
XRN1Q8IZH2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC32.97■■■□□ 2.87
XRN1Q8IZH2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
XRN1Q8IZH2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC32.96■■■□□ 2.87
XRN1Q8IZH2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC32.95■■■□□ 2.87
XRN1Q8IZH2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC32.95■■■□□ 2.87
XRN1Q8IZH2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
XRN1Q8IZH2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
XRN1Q8IZH2 AC091305.1-201ENST00000479476 895 ntBASIC32.95■■■□□ 2.87
XRN1Q8IZH2 AC087623.3-201ENST00000607047 1098 ntBASIC32.95■■■□□ 2.87
XRN1Q8IZH2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
XRN1Q8IZH2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
XRN1Q8IZH2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
XRN1Q8IZH2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
XRN1Q8IZH2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC32.94■■■□□ 2.86
XRN1Q8IZH2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
XRN1Q8IZH2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC32.94■■■□□ 2.86
XRN1Q8IZH2 MIR4767-201ENST00000582827 78 ntBASIC32.94■■■□□ 2.86
XRN1Q8IZH2 AC139426.1-201ENST00000568218 2529 ntBASIC32.93■■■□□ 2.86
XRN1Q8IZH2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC32.93■■■□□ 2.86
XRN1Q8IZH2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC32.93■■■□□ 2.86
XRN1Q8IZH2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
XRN1Q8IZH2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC32.92■■■□□ 2.86
XRN1Q8IZH2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
XRN1Q8IZH2 AL162430.1-201ENST00000480705 870 ntBASIC32.92■■■□□ 2.86
XRN1Q8IZH2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC32.92■■■□□ 2.86
XRN1Q8IZH2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC32.92■■■□□ 2.86
XRN1Q8IZH2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
XRN1Q8IZH2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
XRN1Q8IZH2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC32.91■■■□□ 2.86
XRN1Q8IZH2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
XRN1Q8IZH2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC32.91■■■□□ 2.86
XRN1Q8IZH2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
XRN1Q8IZH2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC32.91■■■□□ 2.86
XRN1Q8IZH2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
XRN1Q8IZH2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC32.91■■■□□ 2.86
XRN1Q8IZH2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC32.9■■■□□ 2.86
XRN1Q8IZH2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC32.9■■■□□ 2.86
XRN1Q8IZH2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC32.9■■■□□ 2.86
XRN1Q8IZH2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
XRN1Q8IZH2 AC004448.1-201ENST00000458332 883 ntBASIC32.9■■■□□ 2.86
XRN1Q8IZH2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
XRN1Q8IZH2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
XRN1Q8IZH2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC32.89■■■□□ 2.86
XRN1Q8IZH2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
XRN1Q8IZH2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
XRN1Q8IZH2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
XRN1Q8IZH2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC32.88■■■□□ 2.85
XRN1Q8IZH2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC32.88■■■□□ 2.85
XRN1Q8IZH2 DUX4L19-201ENST00000557448 1267 ntBASIC32.88■■■□□ 2.85
XRN1Q8IZH2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC32.88■■■□□ 2.85
XRN1Q8IZH2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC32.88■■■□□ 2.85
XRN1Q8IZH2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
XRN1Q8IZH2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
XRN1Q8IZH2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
XRN1Q8IZH2 AC096887.2-201ENST00000623443 1957 ntBASIC32.88■■■□□ 2.85
XRN1Q8IZH2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
XRN1Q8IZH2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
XRN1Q8IZH2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms