RNA–Protein interactions for RNA: ENST00000378223.3

CEP104-201, Transcript of centrosomal protein 104, humanhuman

TSL 1 (best) BASIC

Gene CEP104, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP104-201ENST00000378223 NISCHQ9Y2I1 1504 aa54.57■■■■■ 6.33
CEP104-201ENST00000378223 CCDC180Q9P1Z9 1646 aa48.87■■■■■ 5.41
CEP104-201ENST00000378223 ABCC9O60706 1549 aa48.81■■■■■ 5.4
CEP104-201ENST00000378223 RB1CC1Q8TDY2 1594 aa46.43■■■■■ 5.02
CEP104-201ENST00000378223 NACADO15069 1562 aa46.16■■■■■ 4.98
CEP104-201ENST00000378223 DCAF8L2P0C7V8 631 aa45.92■■■■■ 4.94
CEP104-201ENST00000378223 DNAJC5BQ9UF47 199 aa45.83■■■■■ 4.93
CEP104-201ENST00000378223 UNC13AQ9UPW8 1703 aa45.58■■■■■ 4.89
CEP104-201ENST00000378223 MYO15BQ96JP2 1530 aa45.57■■■■■ 4.88
CEP104-201ENST00000378223 PABPN1Q86U42 306 aaKnown RBP eCLIP45.49■■■■■ 4.87
CEP104-201ENST00000378223 ZCCHC6Q5VYS8 1495 aaKnown RBP45.26■■■■■ 4.84
CEP104-201ENST00000378223 BICRAQ9NZM4 1560 aa45.24■■■■■ 4.83
CEP104-201ENST00000378223 DCAF1Q9Y4B6 1507 aa45.04■■■■■ 4.8
CEP104-201ENST00000378223 SCRIBQ14160 1630 aa44.59■■■■■ 4.73
CEP104-201ENST00000378223 SHROOM4Q9ULL8 1493 aa44.41■■■■■ 4.7
CEP104-201ENST00000378223 CC2D2AQ9P2K1 1620 aa44.12■■■■■ 4.65
CEP104-201ENST00000378223 EIF4G1Q04637 1599 aaKnown RBP44.03■■■■■ 4.64
CEP104-201ENST00000378223 CECR2Q9BXF3 1484 aa43.91■■■■■ 4.62
CEP104-201ENST00000378223 NCAPD3P42695 1498 aa42.65■■■■■ 4.42
CEP104-201ENST00000378223 ATAD2BQ9ULI0 1458 aa42.56■■■■■ 4.4
CEP104-201ENST00000378223 SMARCA4P51532 1647 aa42.56■■■■■ 4.4
CEP104-201ENST00000378223 SMARCA2P51531 1590 aa42.36■■■■■ 4.37
CEP104-201ENST00000378223 HMGXB3Q12766 1538 aa42.31■■■■■ 4.36
CEP104-201ENST00000378223 BAZ1AQ9NRL2 1556 aaPredicted RBP42.28■■■■■ 4.36
CEP104-201ENST00000378223 PEG3Q9GZU2 1588 aa42.14■■■■■ 4.34
CEP104-201ENST00000378223 MROH2BQ7Z745 1585 aa42.1■■■■■ 4.33
CEP104-201ENST00000378223 BAZ1BQ9UIG0 1483 aaKnown RBP42.09■■■■■ 4.33
CEP104-201ENST00000378223 NESP48681 1621 aa42.02■■■■■ 4.32
CEP104-201ENST00000378223 ERCC6Q03468 1493 aa42.02■■■■■ 4.32
CEP104-201ENST00000378223 CUX2O14529 1486 aa41.93■■■■■ 4.3
CEP104-201ENST00000378223 DNAJC5Q9H3Z4 198 aa41.84■■■■■ 4.29
CEP104-201ENST00000378223 LAMC3Q9Y6N6 1575 aa41.63■■■■■ 4.26
CEP104-201ENST00000378223 WIZO95785 1651 aa41.62■■■■■ 4.25
CEP104-201ENST00000378223 THOC2Q8NI27 1593 aaKnown RBP41.55■■■■■ 4.24
CEP104-201ENST00000378223 KIF21AQ7Z4S6 1674 aa41.48■■■■■ 4.23
CEP104-201ENST00000378223 CADPSQ9ULU8 1353 aa41.34■■■■■ 4.21
CEP104-201ENST00000378223 PDS5BQ9NTI5 1447 aa41.34■■■■■ 4.21
CEP104-201ENST00000378223 RSF1Q96T23 1441 aaPredicted RBP41.24■■■■■ 4.19
CEP104-201ENST00000378223 MRC2Q9UBG0 1479 aa41.02■■■■■ 4.16
CEP104-201ENST00000378223 TOP2AP11388 1531 aaKnown RBP41.02■■■■■ 4.16
CEP104-201ENST00000378223 WDR62O43379 1518 aa40.97■■■■■ 4.15
CEP104-201ENST00000378223 CFTRP13569 1480 aa40.91■■■■■ 4.14
CEP104-201ENST00000378223 FANCD2Q9BXW9 1451 aa40.87■■■■■ 4.13
CEP104-201ENST00000378223 CEP164Q9UPV0 1460 aa40.87■■■■■ 4.13
CEP104-201ENST00000378223 CCDC88BA6NC98 1476 aa40.6■■■■■ 4.09
CEP104-201ENST00000378223 URB2Q14146 1524 aaKnown RBP40.6■■■■■ 4.09
CEP104-201ENST00000378223 PRDM2Q13029 1718 aa40.54■■■■■ 4.08
CEP104-201ENST00000378223 TOPBP1Q92547 1522 aa40.15■■■■■ 4.02
CEP104-201ENST00000378223 ZNF608Q9ULD9 1512 aaPredicted RBP40.09■■■■■ 4.01
CEP104-201ENST00000378223 IFT140Q96RY7 1462 aa40.05■■■■■ 4
CEP104-201ENST00000378223 OSCARQ8IYS5 282 aa40.03■■■■■ 4
CEP104-201ENST00000378223 TRIM41Q8WV44 630 aa40.02■■■■■ 4
CEP104-201ENST00000378223 DNMBPQ6XZF7 1577 aa39.97■■■■□ 3.99
CEP104-201ENST00000378223 ABCC8Q09428 1581 aa39.94■■■■□ 3.98
CEP104-201ENST00000378223 EIF4G3O43432 1585 aaKnown RBP39.83■■■■□ 3.97
CEP104-201ENST00000378223 TARBP1Q13395 1621 aaKnown RBP39.82■■■■□ 3.96
CEP104-201ENST00000378223 POLA1P09884 1462 aaPredicted RBP39.75■■■■□ 3.95
CEP104-201ENST00000378223 AQRO60306 1485 aaKnown RBP eCLIP39.72■■■■□ 3.951e-6■■□□□ 11.4
CEP104-201ENST00000378223 RAD54L2Q9Y4B4 1467 aa39.64■■■■□ 3.94
CEP104-201ENST00000378223 RIMBP3CA6NJZ7 1639 aa39.61■■■■□ 3.93
CEP104-201ENST00000378223 RIMBP3BA6NNM3 1639 aa39.61■■■■□ 3.93
CEP104-201ENST00000378223 RIMBP3Q9UFD9 1639 aa39.61■■■■□ 3.93
CEP104-201ENST00000378223 CHD1O14646 1710 aa39.55■■■■□ 3.92
CEP104-201ENST00000378223 CUX1P39880 1505 aa39.54■■■■□ 3.92
CEP104-201ENST00000378223 SOGA1O94964 1423 aa39.53■■■■□ 3.92
CEP104-201ENST00000378223 FGD5Q6ZNL6 1462 aa39.5■■■■□ 3.91
CEP104-201ENST00000378223 TDRD9Q8NDG6 1382 aaKnown RBP39.46■■■■□ 3.91
CEP104-201ENST00000378223 ARHGEF11O15085 1522 aa39.45■■■■□ 3.91
CEP104-201ENST00000378223 SUPT5HO00267 1087 aaKnown RBP39.44■■■■□ 3.9
CEP104-201ENST00000378223 FBLN2P98095 1184 aa39.32■■■■□ 3.89
CEP104-201ENST00000378223 WDR97A6NE52 1622 aa39.29■■■■□ 3.88
CEP104-201ENST00000378223 SNAPC4Q5SXM2 1469 aa39.28■■■■□ 3.88
CEP104-201ENST00000378223 GRIN2BQ13224 1484 aa39.14■■■■□ 3.86
CEP104-201ENST00000378223 MAGI1Q96QZ7 1491 aaPredicted RBP39.13■■■■□ 3.85
CEP104-201ENST00000378223 CYB5RLQ6IPT4 315 aa39.13■■■■□ 3.85
CEP104-201ENST00000378223 ARAP1Q96P48 1450 aa39.11■■■■□ 3.85
CEP104-201ENST00000378223 CLASP1Q7Z460 1538 aa39.09■■■■□ 3.85
CEP104-201ENST00000378223 PBRM1Q86U86 1689 aa39.08■■■■□ 3.85
CEP104-201ENST00000378223 ABCA10Q8WWZ4 1543 aa39.05■■■■□ 3.84
CEP104-201ENST00000378223 GAPVD1Q14C86 1478 aa39.05■■■■□ 3.84
CEP104-201ENST00000378223 CHMP7Q8WUX9 453 aaPredicted RBP39.04■■■■□ 3.84
CEP104-201ENST00000378223 ABCA5Q8WWZ7 1642 aa39.02■■■■□ 3.84
CEP104-201ENST00000378223 SYNJ2O15056 1496 aa39.01■■■■□ 3.84
CEP104-201ENST00000378223 SYNJ1O43426 1573 aa38.97■■■■□ 3.83
CEP104-201ENST00000378223 BIVM-ERCC5R4GMW8 1640 aa38.91■■■■□ 3.82
CEP104-201ENST00000378223 TOP2BQ02880 1626 aa38.89■■■■□ 3.82
CEP104-201ENST00000378223 WRNQ14191 1432 aaPredicted RBP eCLIP38.85■■■■□ 3.81
CEP104-201ENST00000378223 ADAMTS12P58397 1594 aa38.7■■■■□ 3.79
CEP104-201ENST00000378223 GRIN2AQ12879 1464 aa38.67■■■■□ 3.78
CEP104-201ENST00000378223 CEP170Q5SW79 1584 aa38.61■■■■□ 3.77
CEP104-201ENST00000378223 TRHP20396 242 aaPredicted RBP38.59■■■■□ 3.77
CEP104-201ENST00000378223 ERCC6L2Q5T890 1561 aa38.57■■■■□ 3.77
CEP104-201ENST00000378223 NUP160Q12769 1436 aa38.56■■■■□ 3.76
CEP104-201ENST00000378223 FHAD1B1AJZ9 1412 aa38.54■■■■□ 3.76
CEP104-201ENST00000378223 ERICH3Q5RHP9 1530 aa38.53■■■■□ 3.76
CEP104-201ENST00000378223 SHROOM2Q13796 1616 aa38.41■■■■□ 3.74
CEP104-201ENST00000378223 PRG4Q92954 1404 aaPredicted RBP38.15■■■■□ 3.7
CEP104-201ENST00000378223 RUSC2Q8N2Y8 1516 aa38.15■■■■□ 3.7
CEP104-201ENST00000378223 JPH4Q96JJ6 628 aa38.14■■■■□ 3.7
CEP104-201ENST00000378223 IGF1RP08069 1367 aa38.13■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms