Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
TWNKQ96RR1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
TWNKQ96RR1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TWNKQ96RR1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TWNKQ96RR1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TWNKQ96RR1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TWNKQ96RR1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
TWNKQ96RR1 YBX1P4-201ENST00000392794 808 ntBASIC25.05■■□□□ 1.6
TWNKQ96RR1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TWNKQ96RR1 AC022616.5-201ENST00000518796 181 ntBASIC25.05■■□□□ 1.6
TWNKQ96RR1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.05■■□□□ 1.6
TWNKQ96RR1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TWNKQ96RR1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
TWNKQ96RR1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TWNKQ96RR1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
TWNKQ96RR1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TWNKQ96RR1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.04■■□□□ 1.6
TWNKQ96RR1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.04■■□□□ 1.6
TWNKQ96RR1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TWNKQ96RR1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
TWNKQ96RR1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TWNKQ96RR1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.03■■□□□ 1.6
TWNKQ96RR1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
TWNKQ96RR1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
TWNKQ96RR1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.03■■□□□ 1.6
TWNKQ96RR1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TWNKQ96RR1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TWNKQ96RR1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TWNKQ96RR1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
TWNKQ96RR1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.02■■□□□ 1.6
TWNKQ96RR1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.02■■□□□ 1.6
TWNKQ96RR1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TWNKQ96RR1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TWNKQ96RR1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.02■■□□□ 1.6
TWNKQ96RR1 AC138932.3-201ENST00000567634 1902 ntBASIC25.02■■□□□ 1.6
TWNKQ96RR1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
TWNKQ96RR1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.01■■□□□ 1.59
TWNKQ96RR1 AC120024.1-201ENST00000562672 995 ntBASIC25.01■■□□□ 1.59
TWNKQ96RR1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.01■■□□□ 1.59
TWNKQ96RR1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TWNKQ96RR1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25■■□□□ 1.59
TWNKQ96RR1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
TWNKQ96RR1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
TWNKQ96RR1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TWNKQ96RR1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TWNKQ96RR1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
TWNKQ96RR1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.99■■□□□ 1.59
TWNKQ96RR1 MIR6089-201ENST00000616698 64 ntBASIC24.99■■□□□ 1.59
TWNKQ96RR1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TWNKQ96RR1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TWNKQ96RR1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TWNKQ96RR1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TWNKQ96RR1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
TWNKQ96RR1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TWNKQ96RR1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TWNKQ96RR1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TWNKQ96RR1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.97■■□□□ 1.59
TWNKQ96RR1 AC142381.3-201ENST00000568208 1670 ntBASIC24.97■■□□□ 1.59
TWNKQ96RR1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TWNKQ96RR1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.97■■□□□ 1.59
TWNKQ96RR1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TWNKQ96RR1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
TWNKQ96RR1 KRT18P24-201ENST00000344739 1156 ntBASIC24.97■■□□□ 1.59
TWNKQ96RR1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TWNKQ96RR1 AC090877.2-201ENST00000558441 1738 ntBASIC24.97■■□□□ 1.59
TWNKQ96RR1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TWNKQ96RR1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.96■■□□□ 1.59
TWNKQ96RR1 AL451085.2-201ENST00000605085 799 ntBASIC24.96■■□□□ 1.59
TWNKQ96RR1 AL031848.2-201ENST00000607670 837 ntBASIC24.96■■□□□ 1.59
TWNKQ96RR1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.96■■□□□ 1.59
TWNKQ96RR1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
TWNKQ96RR1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TWNKQ96RR1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.95■■□□□ 1.58
TWNKQ96RR1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.95■■□□□ 1.58
TWNKQ96RR1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TWNKQ96RR1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TWNKQ96RR1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
TWNKQ96RR1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
TWNKQ96RR1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TWNKQ96RR1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TWNKQ96RR1 THA1P-201ENST00000590384 1145 ntBASIC24.94■■□□□ 1.58
TWNKQ96RR1 AC011551.1-201ENST00000614101 683 ntBASIC24.94■■□□□ 1.58
TWNKQ96RR1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.94■■□□□ 1.58
TWNKQ96RR1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TWNKQ96RR1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.93■■□□□ 1.58
TWNKQ96RR1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.93■■□□□ 1.58
TWNKQ96RR1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TWNKQ96RR1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.92■■□□□ 1.58
TWNKQ96RR1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TWNKQ96RR1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TWNKQ96RR1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.92■■□□□ 1.58
TWNKQ96RR1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TWNKQ96RR1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.91■■□□□ 1.58
TWNKQ96RR1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
TWNKQ96RR1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.91■■□□□ 1.58
TWNKQ96RR1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
TWNKQ96RR1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.91■■□□□ 1.58
TWNKQ96RR1 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.91■■□□□ 1.58
TWNKQ96RR1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TWNKQ96RR1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms