Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
EDF1O60869 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
EDF1O60869 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
EDF1O60869 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
EDF1O60869 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
EDF1O60869 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
EDF1O60869 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
EDF1O60869 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
EDF1O60869 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.12■■□□□ 1.29
EDF1O60869 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
EDF1O60869 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
EDF1O60869 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
EDF1O60869 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
EDF1O60869 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
EDF1O60869 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.11■■□□□ 1.29
EDF1O60869 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.11■■□□□ 1.29
EDF1O60869 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
EDF1O60869 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.11■■□□□ 1.29
EDF1O60869 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.11■■□□□ 1.29
EDF1O60869 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
EDF1O60869 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
EDF1O60869 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
EDF1O60869 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.1■■□□□ 1.29
EDF1O60869 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
EDF1O60869 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
EDF1O60869 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
EDF1O60869 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
EDF1O60869 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
EDF1O60869 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
EDF1O60869 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.09■■□□□ 1.29
EDF1O60869 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
EDF1O60869 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
EDF1O60869 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
EDF1O60869 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
EDF1O60869 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.09■■□□□ 1.29
EDF1O60869 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
EDF1O60869 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.09■■□□□ 1.29
EDF1O60869 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
EDF1O60869 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
EDF1O60869 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
EDF1O60869 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
EDF1O60869 AL162393.1-201ENST00000437852 946 ntBASIC23.08■■□□□ 1.29
EDF1O60869 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
EDF1O60869 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.08■■□□□ 1.29
EDF1O60869 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
EDF1O60869 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.08■■□□□ 1.29
EDF1O60869 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.08■■□□□ 1.29
EDF1O60869 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.08■■□□□ 1.29
EDF1O60869 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
EDF1O60869 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
EDF1O60869 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.08■■□□□ 1.28
EDF1O60869 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
EDF1O60869 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
EDF1O60869 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
EDF1O60869 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
EDF1O60869 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.07■■□□□ 1.28
EDF1O60869 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.07■■□□□ 1.28
EDF1O60869 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.07■■□□□ 1.28
EDF1O60869 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
EDF1O60869 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
EDF1O60869 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
EDF1O60869 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
EDF1O60869 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
EDF1O60869 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
EDF1O60869 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
EDF1O60869 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
EDF1O60869 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.05■■□□□ 1.28
EDF1O60869 HLA-L-211ENST00000482052 1765 ntBASIC23.05■■□□□ 1.28
EDF1O60869 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.05■■□□□ 1.28
EDF1O60869 DUX4L13-201ENST00000554103 1267 ntBASIC23.05■■□□□ 1.28
EDF1O60869 DUX4L15-201ENST00000611059 1267 ntBASIC23.05■■□□□ 1.28
EDF1O60869 DUX4L23-201ENST00000615195 1269 ntBASIC23.05■■□□□ 1.28
EDF1O60869 DUX4L24-201ENST00000617576 1269 ntBASIC23.05■■□□□ 1.28
EDF1O60869 DUX4L22-201ENST00000618238 1269 ntBASIC23.05■■□□□ 1.28
EDF1O60869 DUX4L20-201ENST00000619712 1269 ntBASIC23.05■■□□□ 1.28
EDF1O60869 DUX4L21-201ENST00000622058 1269 ntBASIC23.05■■□□□ 1.28
EDF1O60869 DUX4L10-201ENST00000622460 1267 ntBASIC23.05■■□□□ 1.28
EDF1O60869 DUX4L25-201ENST00000624915 1269 ntBASIC23.05■■□□□ 1.28
EDF1O60869 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
EDF1O60869 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
EDF1O60869 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
EDF1O60869 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
EDF1O60869 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
EDF1O60869 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
EDF1O60869 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
EDF1O60869 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
EDF1O60869 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
EDF1O60869 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
EDF1O60869 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
EDF1O60869 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
EDF1O60869 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.03■■□□□ 1.28
EDF1O60869 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
EDF1O60869 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
EDF1O60869 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
EDF1O60869 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
EDF1O60869 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
EDF1O60869 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
EDF1O60869 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
EDF1O60869 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.02■■□□□ 1.28
EDF1O60869 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms