RNA–Protein interactions for RNA: ENST00000371747.7

TTC39A-203, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-203ENST00000371747 NISCHQ9Y2I1 1504 aa50.78■■■■■ 5.72
TTC39A-203ENST00000371747 CCDC180Q9P1Z9 1646 aa44.19■■■■■ 4.67
TTC39A-203ENST00000371747 ZCCHC6Q5VYS8 1495 aaKnown RBP42.72■■■■■ 4.43
TTC39A-203ENST00000371747 ABCC9O60706 1549 aa42.04■■■■■ 4.32
TTC39A-203ENST00000371747 DCAF8L2P0C7V8 631 aa41.96■■■■■ 4.31
TTC39A-203ENST00000371747 DCAF1Q9Y4B6 1507 aa41.94■■■■■ 4.3
TTC39A-203ENST00000371747 SHROOM4Q9ULL8 1493 aa41.77■■■■■ 4.28
TTC39A-203ENST00000371747 MYO15BQ96JP2 1530 aa41.41■■■■■ 4.22
TTC39A-203ENST00000371747 NACADO15069 1562 aa41.23■■■■■ 4.19
TTC39A-203ENST00000371747 RB1CC1Q8TDY2 1594 aa40.91■■■■■ 4.14
TTC39A-203ENST00000371747 SCRIBQ14160 1630 aa40.67■■■■■ 4.1
TTC39A-203ENST00000371747 SUPT5HO00267 1087 aaKnown RBP40.36■■■■■ 4.05
TTC39A-203ENST00000371747 UNC13AQ9UPW8 1703 aa40.18■■■■■ 4.02
TTC39A-203ENST00000371747 BICRAQ9NZM4 1560 aa39.76■■■■□ 3.96
TTC39A-203ENST00000371747 PABPN1Q86U42 306 aaKnown RBP eCLIP39.66■■■■□ 3.94
TTC39A-203ENST00000371747 RSF1Q96T23 1441 aaPredicted RBP39.56■■■■□ 3.92
TTC39A-203ENST00000371747 CECR2Q9BXF3 1484 aa39.49■■■■□ 3.91
TTC39A-203ENST00000371747 MROH2BQ7Z745 1585 aa39.28■■■■□ 3.88
TTC39A-203ENST00000371747 BAZ1AQ9NRL2 1556 aaPredicted RBP39.16■■■■□ 3.86
TTC39A-203ENST00000371747 WIZO95785 1651 aa38.98■■■■□ 3.83
TTC39A-203ENST00000371747 SMARCA4P51532 1647 aa38.96■■■■□ 3.83
TTC39A-203ENST00000371747 CHIC1Q5VXU3 224 aa38.8■■■■□ 3.8
TTC39A-203ENST00000371747 EIF4G1Q04637 1599 aaKnown RBP38.54■■■■□ 3.76
TTC39A-203ENST00000371747 TOP2AP11388 1531 aaKnown RBP38.53■■■■□ 3.76
TTC39A-203ENST00000371747 PEG3Q9GZU2 1588 aa38.49■■■■□ 3.75
TTC39A-203ENST00000371747 ATAD2BQ9ULI0 1458 aa38.39■■■■□ 3.74
TTC39A-203ENST00000371747 SMARCA2P51531 1590 aa38.31■■■■□ 3.72
TTC39A-203ENST00000371747 CCDC88BA6NC98 1476 aa38.2■■■■□ 3.7
TTC39A-203ENST00000371747 BAZ1BQ9UIG0 1483 aaKnown RBP38.12■■■■□ 3.69
TTC39A-203ENST00000371747 NCAPD3P42695 1498 aa38.09■■■■□ 3.69
TTC39A-203ENST00000371747 CC2D2AQ9P2K1 1620 aa38.04■■■■□ 3.68
TTC39A-203ENST00000371747 HMGXB3Q12766 1538 aa37.97■■■■□ 3.67
TTC39A-203ENST00000371747 TRIM41Q8WV44 630 aa37.88■■■■□ 3.65
TTC39A-203ENST00000371747 ABCC8Q09428 1581 aa37.52■■■■□ 3.6
TTC39A-203ENST00000371747 LOC105371045A0A1W2PR82 267 aa37.37■■■■□ 3.57
TTC39A-203ENST00000371747 DNAJC5BQ9UF47 199 aa37.37■■■■□ 3.57
TTC39A-203ENST00000371747 FAM9AQ8IZU1 332 aaPredicted RBP37.26■■■■□ 3.55
TTC39A-203ENST00000371747 WRNQ14191 1432 aaPredicted RBP eCLIP37.21■■■■□ 3.55
TTC39A-203ENST00000371747 CFTRP13569 1480 aa37.19■■■■□ 3.54
TTC39A-203ENST00000371747 CADPSQ9ULU8 1353 aa37.11■■■■□ 3.53
TTC39A-203ENST00000371747 SYNJ1O43426 1573 aa37.05■■■■□ 3.52
TTC39A-203ENST00000371747 PRDM2Q13029 1718 aa36.96■■■■□ 3.51
TTC39A-203ENST00000371747 SOGA1O94964 1423 aa36.9■■■■□ 3.5
TTC39A-203ENST00000371747 NESP48681 1621 aa36.88■■■■□ 3.49
TTC39A-203ENST00000371747 TOP2BQ02880 1626 aa36.85■■■■□ 3.49
TTC39A-203ENST00000371747 EEA1Q15075 1411 aa36.82■■■■□ 3.48
TTC39A-203ENST00000371747 BIVM-ERCC5R4GMW8 1640 aa36.79■■■■□ 3.48
TTC39A-203ENST00000371747 LAMC3Q9Y6N6 1575 aa36.79■■■■□ 3.48
TTC39A-203ENST00000371747 RUSC2Q8N2Y8 1516 aa36.76■■■■□ 3.48
TTC39A-203ENST00000371747 EHMT2Q96KQ7 1210 aa36.75■■■■□ 3.47
TTC39A-203ENST00000371747 CUX1P39880 1505 aa36.69■■■■□ 3.46
TTC39A-203ENST00000371747 FANCD2Q9BXW9 1451 aa36.68■■■■□ 3.46
TTC39A-203ENST00000371747 CSRNP3Q8WYN3 585 aa36.65■■■■□ 3.46
TTC39A-203ENST00000371747 PDS5BQ9NTI5 1447 aa36.51■■■■□ 3.43
TTC39A-203ENST00000371747 CEP164Q9UPV0 1460 aa36.44■■■■□ 3.42
TTC39A-203ENST00000371747 KIF21AQ7Z4S6 1674 aa36.4■■■■□ 3.42
TTC39A-203ENST00000371747 GOLGA3Q08378 1498 aa36.36■■■■□ 3.41
TTC39A-203ENST00000371747 KIF21BO75037 1637 aa36.33■■■■□ 3.41
TTC39A-203ENST00000371747 TNIKQ9UKE5 1360 aa36.33■■■■□ 3.41
TTC39A-203ENST00000371747 DNMBPQ6XZF7 1577 aa36.29■■■■□ 3.4
TTC39A-203ENST00000371747 TOPBP1Q92547 1522 aa36.27■■■■□ 3.4
TTC39A-203ENST00000371747 URB2Q14146 1524 aaKnown RBP36.26■■■■□ 3.4
TTC39A-203ENST00000371747 FGD5Q6ZNL6 1462 aa36.23■■■■□ 3.39
TTC39A-203ENST00000371747 UBTFP17480 764 aaKnown RBP36.23■■■■□ 3.39
TTC39A-203ENST00000371747 KIF27Q86VH2 1401 aa36.23■■■■□ 3.39
TTC39A-203ENST00000371747 CEP162Q5TB80 1403 aa36.16■■■■□ 3.38
TTC39A-203ENST00000371747 RAPGEF2Q9Y4G8 1499 aa36.12■■■■□ 3.37
TTC39A-203ENST00000371747 POLA1P09884 1462 aaPredicted RBP36.08■■■■□ 3.37
TTC39A-203ENST00000371747 PRXQ9BXM0 1461 aa36.08■■■■□ 3.37
TTC39A-203ENST00000371747 CUX2O14529 1486 aa36.07■■■■□ 3.37
TTC39A-203ENST00000371747 MRC2Q9UBG0 1479 aa36.05■■■■□ 3.36
TTC39A-203ENST00000371747 ERICH3Q5RHP9 1530 aa36.02■■■■□ 3.36
TTC39A-203ENST00000371747 RAD54L2Q9Y4B4 1467 aa36■■■■□ 3.35
TTC39A-203ENST00000371747 PCGF6Q9BYE7 350 aa36■■■■□ 3.35
TTC39A-203ENST00000371747 ERCC6Q03468 1493 aa36■■■■□ 3.35
TTC39A-203ENST00000371747 ABCA10Q8WWZ4 1543 aa35.91■■■■□ 3.34
TTC39A-203ENST00000371747 IGF1RP08069 1367 aa35.9■■■■□ 3.34
TTC39A-203ENST00000371747 WDR62O43379 1518 aa35.88■■■■□ 3.33
TTC39A-203ENST00000371747 TRIM26Q12899 539 aaPredicted RBP35.87■■■■□ 3.33
TTC39A-203ENST00000371747 THOC2Q8NI27 1593 aaKnown RBP35.83■■■■□ 3.33
TTC39A-203ENST00000371747 CLIP1P30622 1438 aa35.81■■■■□ 3.32
TTC39A-203ENST00000371747 WDR97A6NE52 1622 aa35.79■■■■□ 3.32
TTC39A-203ENST00000371747 TARBP1Q13395 1621 aaKnown RBP35.76■■■■□ 3.31
TTC39A-203ENST00000371747 CARMIL1Q5VZK9 1371 aa35.72■■■■□ 3.31
TTC39A-203ENST00000371747 TDRD9Q8NDG6 1382 aaKnown RBP35.67■■■■□ 3.3
TTC39A-203ENST00000371747 PPARGC1BQ86YN6 1023 aaKnown RBP35.61■■■■□ 3.29
TTC39A-203ENST00000371747 ABCA5Q8WWZ7 1642 aa35.61■■■■□ 3.29
TTC39A-203ENST00000371747 RANGAP1P46060 587 aaPredicted RBP35.58■■■■□ 3.29
TTC39A-203ENST00000371747 IFT140Q96RY7 1462 aa35.58■■■■□ 3.29
TTC39A-203ENST00000371747 GAPVD1Q14C86 1478 aa35.56■■■■□ 3.28
TTC39A-203ENST00000371747 CUL7Q14999 1698 aa35.53■■■■□ 3.28
TTC39A-203ENST00000371747 VPS8Q8N3P4 1428 aa35.53■■■■□ 3.28
TTC39A-203ENST00000371747 AQRO60306 1485 aaKnown RBP eCLIP35.48■■■■□ 3.27
TTC39A-203ENST00000371747 ZNF608Q9ULD9 1512 aaPredicted RBP35.46■■■■□ 3.27
TTC39A-203ENST00000371747 ARAP1Q96P48 1450 aa35.42■■■■□ 3.26
TTC39A-203ENST00000371747 PBRM1Q86U86 1689 aa35.36■■■■□ 3.25
TTC39A-203ENST00000371747 ARHGAP35Q9NRY4 1499 aa35.35■■■■□ 3.25
TTC39A-203ENST00000371747 GRIN2BQ13224 1484 aa35.29■■■■□ 3.24
TTC39A-203ENST00000371747 EIF4G3O43432 1585 aaKnown RBP35.28■■■■□ 3.24
TTC39A-203ENST00000371747 TTBK1Q5TCY1 1321 aaPredicted RBP35.25■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms