Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RNF113AO15541 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.36■■■□□ 2.13
RNF113AO15541 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RNF113AO15541 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RNF113AO15541 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC28.36■■■□□ 2.13
RNF113AO15541 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
RNF113AO15541 KRT18P24-201ENST00000344739 1156 ntBASIC28.35■■■□□ 2.13
RNF113AO15541 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RNF113AO15541 AC120024.1-201ENST00000562672 995 ntBASIC28.35■■■□□ 2.13
RNF113AO15541 SSSCA1-AS1-201ENST00000567594 614 ntBASIC28.35■■■□□ 2.13
RNF113AO15541 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RNF113AO15541 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RNF113AO15541 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RNF113AO15541 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RNF113AO15541 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC28.35■■■□□ 2.13
RNF113AO15541 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC28.34■■■□□ 2.13
RNF113AO15541 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RNF113AO15541 AC022211.4-201ENST00000625094 2161 ntBASIC28.34■■■□□ 2.13
RNF113AO15541 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
RNF113AO15541 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RNF113AO15541 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.33■■■□□ 2.13
RNF113AO15541 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RNF113AO15541 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC28.33■■■□□ 2.13
RNF113AO15541 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RNF113AO15541 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RNF113AO15541 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RNF113AO15541 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
RNF113AO15541 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
RNF113AO15541 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
RNF113AO15541 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
RNF113AO15541 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
RNF113AO15541 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
RNF113AO15541 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
RNF113AO15541 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.3■■■□□ 2.12
RNF113AO15541 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RNF113AO15541 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
RNF113AO15541 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
RNF113AO15541 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RNF113AO15541 AL031848.2-201ENST00000607670 837 ntBASIC28.3■■■□□ 2.12
RNF113AO15541 AC011551.1-201ENST00000614101 683 ntBASIC28.3■■■□□ 2.12
RNF113AO15541 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RNF113AO15541 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.29■■■□□ 2.12
RNF113AO15541 AC090877.2-201ENST00000558441 1738 ntBASIC28.29■■■□□ 2.12
RNF113AO15541 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
RNF113AO15541 THA1P-201ENST00000590384 1145 ntBASIC28.29■■■□□ 2.12
RNF113AO15541 MIR6089-201ENST00000616698 64 ntBASIC28.29■■■□□ 2.12
RNF113AO15541 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.28■■■□□ 2.12
RNF113AO15541 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
RNF113AO15541 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
RNF113AO15541 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RNF113AO15541 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RNF113AO15541 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RNF113AO15541 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RNF113AO15541 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RNF113AO15541 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC28.26■■■□□ 2.12
RNF113AO15541 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.26■■■□□ 2.11
RNF113AO15541 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RNF113AO15541 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RNF113AO15541 AL451085.2-201ENST00000605085 799 ntBASIC28.25■■■□□ 2.11
RNF113AO15541 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC28.25■■■□□ 2.11
RNF113AO15541 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.25■■■□□ 2.11
RNF113AO15541 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RNF113AO15541 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.24■■■□□ 2.11
RNF113AO15541 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RNF113AO15541 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
RNF113AO15541 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC28.24■■■□□ 2.11
RNF113AO15541 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RNF113AO15541 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RNF113AO15541 TK2-216ENST00000564917 1156 ntTSL 3 BASIC28.24■■■□□ 2.11
RNF113AO15541 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.24■■■□□ 2.11
RNF113AO15541 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC28.24■■■□□ 2.11
RNF113AO15541 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.24■■■□□ 2.11
RNF113AO15541 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RNF113AO15541 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.23■■■□□ 2.11
RNF113AO15541 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RNF113AO15541 AC142381.3-201ENST00000568208 1670 ntBASIC28.23■■■□□ 2.11
RNF113AO15541 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC28.23■■■□□ 2.11
RNF113AO15541 PRTG-204ENST00000561292 833 ntTSL 3 BASIC28.23■■■□□ 2.11
RNF113AO15541 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RNF113AO15541 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RNF113AO15541 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RNF113AO15541 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.23■■■□□ 2.11
RNF113AO15541 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RNF113AO15541 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RNF113AO15541 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
RNF113AO15541 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.22■■■□□ 2.11
RNF113AO15541 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RNF113AO15541 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RNF113AO15541 AC138932.3-201ENST00000567634 1902 ntBASIC28.21■■■□□ 2.11
RNF113AO15541 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RNF113AO15541 MIR4281-201ENST00000580852 62 ntBASIC28.2■■■□□ 2.1
RNF113AO15541 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
RNF113AO15541 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RNF113AO15541 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RNF113AO15541 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.19■■■□□ 2.1
RNF113AO15541 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RNF113AO15541 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RNF113AO15541 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
RNF113AO15541 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.18■■■□□ 2.1
RNF113AO15541 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms