Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
CTDP1Q9Y5B0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC33.71■■■□□ 2.99
CTDP1Q9Y5B0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
CTDP1Q9Y5B0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC33.67■■■□□ 2.98
CTDP1Q9Y5B0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC33.66■■■□□ 2.98
CTDP1Q9Y5B0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
CTDP1Q9Y5B0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
CTDP1Q9Y5B0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC33.6■■■□□ 2.97
CTDP1Q9Y5B0 AL031258.1-201ENST00000623562 325 ntBASIC33.6■■■□□ 2.97
CTDP1Q9Y5B0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC33.58■■■□□ 2.97
CTDP1Q9Y5B0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC33.57■■■□□ 2.96
CTDP1Q9Y5B0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
CTDP1Q9Y5B0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC33.46■■■□□ 2.95
CTDP1Q9Y5B0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
CTDP1Q9Y5B0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
CTDP1Q9Y5B0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC33.44■■■□□ 2.94
CTDP1Q9Y5B0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC33.43■■■□□ 2.94
CTDP1Q9Y5B0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC33.43■■■□□ 2.94
CTDP1Q9Y5B0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CTDP1Q9Y5B0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC33.39■■■□□ 2.94
CTDP1Q9Y5B0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
CTDP1Q9Y5B0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
CTDP1Q9Y5B0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC33.31■■■□□ 2.92
CTDP1Q9Y5B0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC33.29■■■□□ 2.92
CTDP1Q9Y5B0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC33.28■■■□□ 2.92
CTDP1Q9Y5B0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC33.23■■■□□ 2.91
CTDP1Q9Y5B0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
CTDP1Q9Y5B0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC33.22■■■□□ 2.91
CTDP1Q9Y5B0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CTDP1Q9Y5B0 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
CTDP1Q9Y5B0 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
CTDP1Q9Y5B0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC33.19■■■□□ 2.9
CTDP1Q9Y5B0 RARRES2P7-201ENST00000567349 469 ntBASIC33.14■■■□□ 2.9
CTDP1Q9Y5B0 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
CTDP1Q9Y5B0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CTDP1Q9Y5B0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC33.1■■■□□ 2.89
CTDP1Q9Y5B0 AC145285.7-201ENST00000614819 1539 ntBASIC33.1■■■□□ 2.89
CTDP1Q9Y5B0 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC33.1■■■□□ 2.89
CTDP1Q9Y5B0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CTDP1Q9Y5B0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC33.07■■■□□ 2.88
CTDP1Q9Y5B0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CTDP1Q9Y5B0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC33.02■■■□□ 2.88
CTDP1Q9Y5B0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CTDP1Q9Y5B0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.98■■■□□ 2.87
CTDP1Q9Y5B0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.95■■■□□ 2.87
CTDP1Q9Y5B0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.95■■■□□ 2.86
CTDP1Q9Y5B0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CTDP1Q9Y5B0 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.93■■■□□ 2.86
CTDP1Q9Y5B0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
CTDP1Q9Y5B0 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.92■■■□□ 2.86
CTDP1Q9Y5B0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.92■■■□□ 2.86
CTDP1Q9Y5B0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.91■■■□□ 2.86
CTDP1Q9Y5B0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.9■■■□□ 2.86
CTDP1Q9Y5B0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.9■■■□□ 2.86
CTDP1Q9Y5B0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
CTDP1Q9Y5B0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
CTDP1Q9Y5B0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.86■■■□□ 2.85
CTDP1Q9Y5B0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.85■■■□□ 2.85
CTDP1Q9Y5B0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.83■■■□□ 2.85
CTDP1Q9Y5B0 SETD8P1-201ENST00000623146 1180 ntBASIC32.83■■■□□ 2.85
CTDP1Q9Y5B0 AC097358.2-201ENST00000607541 1159 ntBASIC32.8■■■□□ 2.84
CTDP1Q9Y5B0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CTDP1Q9Y5B0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.79■■■□□ 2.84
CTDP1Q9Y5B0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.78■■■□□ 2.84
CTDP1Q9Y5B0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.78■■■□□ 2.84
CTDP1Q9Y5B0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.77■■■□□ 2.84
CTDP1Q9Y5B0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.83
CTDP1Q9Y5B0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CTDP1Q9Y5B0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CTDP1Q9Y5B0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.71■■■□□ 2.83
CTDP1Q9Y5B0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CTDP1Q9Y5B0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CTDP1Q9Y5B0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CTDP1Q9Y5B0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
CTDP1Q9Y5B0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CTDP1Q9Y5B0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CTDP1Q9Y5B0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.62■■■□□ 2.81
CTDP1Q9Y5B0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC32.62■■■□□ 2.81
CTDP1Q9Y5B0 AC136428.2-201ENST00000563187 214 ntBASIC32.61■■■□□ 2.81
CTDP1Q9Y5B0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.57■■■□□ 2.8
CTDP1Q9Y5B0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CTDP1Q9Y5B0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CTDP1Q9Y5B0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CTDP1Q9Y5B0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.52■■■□□ 2.8
CTDP1Q9Y5B0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.8
CTDP1Q9Y5B0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CTDP1Q9Y5B0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CTDP1Q9Y5B0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
CTDP1Q9Y5B0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.49■■■□□ 2.79
CTDP1Q9Y5B0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.46■■■□□ 2.79
CTDP1Q9Y5B0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.46■■■□□ 2.79
CTDP1Q9Y5B0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CTDP1Q9Y5B0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CTDP1Q9Y5B0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CTDP1Q9Y5B0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CTDP1Q9Y5B0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
CTDP1Q9Y5B0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.42■■■□□ 2.78
CTDP1Q9Y5B0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.42■■■□□ 2.78
CTDP1Q9Y5B0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
CTDP1Q9Y5B0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms