Protein–RNA interactions for Protein: Q99954

SMR3A, Submaxillary gland androgen-regulated protein 3A, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMR3AQ99954 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SMR3AQ99954 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SMR3AQ99954 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SMR3AQ99954 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.69■■□□□ 1.54
SMR3AQ99954 RARRES2P7-201ENST00000567349 469 ntBASIC24.68■■□□□ 1.54
SMR3AQ99954 RPS2P35-201ENST00000443417 897 ntBASIC24.63■■□□□ 1.53
SMR3AQ99954 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMR3AQ99954 AC097358.2-201ENST00000607541 1159 ntBASIC24.56■■□□□ 1.52
SMR3AQ99954 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMR3AQ99954 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SMR3AQ99954 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC24.52■■□□□ 1.52
SMR3AQ99954 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMR3AQ99954 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMR3AQ99954 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMR3AQ99954 AC136428.2-201ENST00000563187 214 ntBASIC24.44■■□□□ 1.5
SMR3AQ99954 SUZ12P1-203ENST00000578195 985 ntBASIC24.42■■□□□ 1.5
SMR3AQ99954 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.38■■□□□ 1.49
SMR3AQ99954 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SMR3AQ99954 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
SMR3AQ99954 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMR3AQ99954 SETD8P1-201ENST00000623146 1180 ntBASIC24.37■■□□□ 1.49
SMR3AQ99954 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
SMR3AQ99954 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMR3AQ99954 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC24.3■■□□□ 1.48
SMR3AQ99954 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMR3AQ99954 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.29■■□□□ 1.48
SMR3AQ99954 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMR3AQ99954 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.28■■□□□ 1.48
SMR3AQ99954 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.26■■□□□ 1.47
SMR3AQ99954 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMR3AQ99954 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMR3AQ99954 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.25■■□□□ 1.47
SMR3AQ99954 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMR3AQ99954 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SMR3AQ99954 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SMR3AQ99954 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.16■■□□□ 1.46
SMR3AQ99954 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SMR3AQ99954 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.15■■□□□ 1.46
SMR3AQ99954 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMR3AQ99954 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMR3AQ99954 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SMR3AQ99954 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.13■■□□□ 1.45
SMR3AQ99954 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
SMR3AQ99954 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC24.11■■□□□ 1.45
SMR3AQ99954 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.11■■□□□ 1.45
SMR3AQ99954 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
SMR3AQ99954 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.1■■□□□ 1.45
SMR3AQ99954 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.1■■□□□ 1.45
SMR3AQ99954 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC24.08■■□□□ 1.45
SMR3AQ99954 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.05■■□□□ 1.44
SMR3AQ99954 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMR3AQ99954 AL162393.1-201ENST00000437852 946 ntBASIC24.03■■□□□ 1.44
SMR3AQ99954 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC24.03■■□□□ 1.44
SMR3AQ99954 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
SMR3AQ99954 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.01■■□□□ 1.43
SMR3AQ99954 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.98■■□□□ 1.43
SMR3AQ99954 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMR3AQ99954 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.96■■□□□ 1.43
SMR3AQ99954 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMR3AQ99954 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SMR3AQ99954 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMR3AQ99954 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
SMR3AQ99954 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMR3AQ99954 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.91■■□□□ 1.42
SMR3AQ99954 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC23.91■■□□□ 1.42
SMR3AQ99954 CAHM-201ENST00000604200 896 ntBASIC23.9■■□□□ 1.42
SMR3AQ99954 MIR7108-201ENST00000614319 87 ntBASIC23.9■■□□□ 1.42
SMR3AQ99954 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SMR3AQ99954 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SMR3AQ99954 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMR3AQ99954 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.85■■□□□ 1.41
SMR3AQ99954 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMR3AQ99954 ABHD17AP4-201ENST00000411545 909 ntBASIC23.82■■□□□ 1.4
SMR3AQ99954 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
SMR3AQ99954 AP006261.1-201ENST00000584783 668 ntBASIC23.82■■□□□ 1.4
SMR3AQ99954 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMR3AQ99954 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.8■■□□□ 1.4
SMR3AQ99954 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.8■■□□□ 1.4
SMR3AQ99954 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMR3AQ99954 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMR3AQ99954 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMR3AQ99954 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SMR3AQ99954 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMR3AQ99954 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMR3AQ99954 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.72■■□□□ 1.39
SMR3AQ99954 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.71■■□□□ 1.39
SMR3AQ99954 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMR3AQ99954 HLA-V-202ENST00000446817 847 ntBASIC23.7■■□□□ 1.38
SMR3AQ99954 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC23.7■■□□□ 1.38
SMR3AQ99954 AL391121.1-201ENST00000607967 1349 ntBASIC23.69■■□□□ 1.38
SMR3AQ99954 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMR3AQ99954 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMR3AQ99954 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMR3AQ99954 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.64■■□□□ 1.37
SMR3AQ99954 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMR3AQ99954 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMR3AQ99954 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.63■■□□□ 1.37
SMR3AQ99954 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SMR3AQ99954 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SMR3AQ99954 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms